RNA–Protein interactions for RNA: ENST00000489585.5

LYST-211, Transcript of lysosomal trafficking regulator, humanhuman

TSL 1 (best)

Gene LYST, Length 7,069 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYST-211ENST00000489585 KRTAP12-1P59990 96 aa2.1□□□□□ -2.07
LYST-211ENST00000489585 LRRK2Q5S007 2527 aa2.09□□□□□ -2.07
LYST-211ENST00000489585 TENM3Q9P273 2699 aa2.09□□□□□ -2.08
LYST-211ENST00000489585 KRTAP17-1Q9BYP8 105 aa2.09□□□□□ -2.08
LYST-211ENST00000489585 GCN1Q92616 2671 aaKnown RBP2.08□□□□□ -2.08
LYST-211ENST00000489585 KRTAP1-4P0C5Y4 121 aa2.07□□□□□ -2.08
LYST-211ENST00000489585 IGF2RP11717 2491 aa2.07□□□□□ -2.08
LYST-211ENST00000489585 TLN1Q9Y490 2541 aaKnown RBP2.07□□□□□ -2.08
LYST-211ENST00000489585 LPAP08519 4548 aa2.07□□□□□ -2.08
LYST-211ENST00000489585 TLN2Q9Y4G6 2542 aa2.06□□□□□ -2.08
LYST-211ENST00000489585 CRCT1Q9UGL9 99 aa2.06□□□□□ -2.08
LYST-211ENST00000489585 DNHD1Q96M86 4753 aa2.06□□□□□ -2.08
LYST-211ENST00000489585 JMJD1CQ15652 2540 aa2.05□□□□□ -2.08
LYST-211ENST00000489585 EPG5Q9HCE0 2579 aa2.05□□□□□ -2.08
LYST-211ENST00000489585 DMBT1Q9UGM3 2413 aaPredicted RBP2.04□□□□□ -2.08
LYST-211ENST00000489585 ZFYVE26Q68DK2 2539 aa2.03□□□□□ -2.08
LYST-211ENST00000489585 NBEAL1Q6ZS30 2694 aa2.02□□□□□ -2.09
LYST-211ENST00000489585 ABCA12Q86UK0 2595 aa2.02□□□□□ -2.09
LYST-211ENST00000489585 TGP01266 2768 aa2.02□□□□□ -2.09
LYST-211ENST00000489585 USP9YO00507 2555 aaPredicted RBP2.01□□□□□ -2.09
LYST-211ENST00000489585 HELZ2Q9BYK8 2649 aaKnown RBP2.01□□□□□ -2.09
LYST-211ENST00000489585 ITPR2Q14571 2701 aa2.01□□□□□ -2.09
LYST-211ENST00000489585 HERC1Q15751 4861 aa2.01□□□□□ -2.09
LYST-211ENST00000489585 MTORP42345 2549 aa2□□□□□ -2.09
LYST-211ENST00000489585 PCLOQ9Y6V0 5065 aa2□□□□□ -2.09
LYST-211ENST00000489585 MUC17Q685J3 4493 aa1.98□□□□□ -2.09
LYST-211ENST00000489585 USP9XQ93008 2570 aaPredicted RBP1.98□□□□□ -2.09
LYST-211ENST00000489585 KRTAP10-12P60413 245 aa1.96□□□□□ -2.1
LYST-211ENST00000489585 BAHCC1Q9P281 2608 aa1.96□□□□□ -2.1
LYST-211ENST00000489585 KRTAP10-5P60370 271 aa1.95□□□□□ -2.1
LYST-211ENST00000489585 MAST4O15021 2626 aa1.94□□□□□ -2.1
LYST-211ENST00000489585 FLNBO75369 2602 aaKnown RBP1.94□□□□□ -2.1
LYST-211ENST00000489585 IGSF10Q6WRI0 2623 aa1.94□□□□□ -2.1
LYST-211ENST00000489585 RYR3Q15413 4870 aa1.93□□□□□ -2.1
LYST-211ENST00000489585 KRTAP12-3P60328 96 aa1.93□□□□□ -2.1
LYST-211ENST00000489585 TEP1Q99973 2627 aaKnown RBP1.93□□□□□ -2.1
LYST-211ENST00000489585 KMT2CQ8NEZ4 4911 aaKnown RBP1.92□□□□□ -2.1
LYST-211ENST00000489585 FASNP49327 2511 aaKnown RBP1.9□□□□□ -2.1
LYST-211ENST00000489585 POLQO75417 2590 aa1.9□□□□□ -2.1
LYST-211ENST00000489585 STAB2Q8WWQ8 2551 aa1.88□□□□□ -2.11
LYST-211ENST00000489585 MGAM2Q2M2H8 2515 aa1.88□□□□□ -2.11
LYST-211ENST00000489585 STAB1Q9NY15 2570 aa1.88□□□□□ -2.11
LYST-211ENST00000489585 NSD1Q96L73 2696 aaPredicted RBP1.88□□□□□ -2.11
LYST-211ENST00000489585 SETD2Q9BYW2 2564 aaPredicted RBP1.87□□□□□ -2.11
LYST-211ENST00000489585 RYR1P21817 5038 aa1.86□□□□□ -2.11
LYST-211ENST00000489585 KRTAP21-3Q3LHN1 58 aa1.86□□□□□ -2.11
LYST-211ENST00000489585 LCE3AQ5TA76 89 aa1.86□□□□□ -2.11
LYST-211ENST00000489585 USP24Q9UPU5 2620 aa1.85□□□□□ -2.11
LYST-211ENST00000489585 RYR2Q92736 4967 aa1.85□□□□□ -2.11
LYST-211ENST00000489585 ABCA13Q86UQ4 5058 aa1.84□□□□□ -2.12
LYST-211ENST00000489585 KRTAP10-4P60372 401 aaPredicted RBP1.83□□□□□ -2.12
LYST-211ENST00000489585 KRTAP19-2Q3LHN2 52 aa1.81□□□□□ -2.12
LYST-211ENST00000489585 KRTAP19-4Q3LI73 84 aa1.81□□□□□ -2.12
LYST-211ENST00000489585 ATRQ13535 2644 aa1.81□□□□□ -2.12
LYST-211ENST00000489585 LRP2P98164 4655 aa1.79□□□□□ -2.12
LYST-211ENST00000489585 COL6A5A8TX70 2615 aa1.78□□□□□ -2.12
LYST-211ENST00000489585 NOTCH1P46531 2555 aa1.78□□□□□ -2.13
LYST-211ENST00000489585 FLNAP21333 2647 aaKnown RBP1.76□□□□□ -2.13
LYST-211ENST00000489585 LORP23490 312 aaPredicted RBP1.76□□□□□ -2.13
LYST-211ENST00000489585 KRTAP8-1Q8IUC2 63 aa1.76□□□□□ -2.13
LYST-211ENST00000489585 RNF213Q63HN8 5207 aa1.76□□□□□ -2.13
LYST-211ENST00000489585 UBR4Q5T4S7 5183 aa1.75□□□□□ -2.13
LYST-211ENST00000489585 HERC2O95714 4834 aa1.74□□□□□ -2.13
LYST-211ENST00000489585 BIRC6Q9NR09 4857 aa1.74□□□□□ -2.13
LYST-211ENST00000489585 EPPK1P58107 5090 aaKnown RBP1.71□□□□□ -2.14
LYST-211ENST00000489585 HMCN2Q8NDA2 5059 aa1.71□□□□□ -2.14
LYST-211ENST00000489585 MUC2Q02817 5179 aa1.71□□□□□ -2.14
LYST-211ENST00000489585 KIAA1109Q2LD37 5005 aa1.69□□□□□ -2.14
LYST-211ENST00000489585 MT3P25713 68 aa1.68□□□□□ -2.14
LYST-211ENST00000489585 LCE3CQ5T5A8 94 aa1.65□□□□□ -2.15
LYST-211ENST00000489585 KRTAP2-3P0C7H8 128 aa1.64□□□□□ -2.15
LYST-211ENST00000489585 KRTAP2-4Q9BYR9 128 aa1.64□□□□□ -2.15
LYST-211ENST00000489585 KRTAP2-1Q9BYU5 128 aa1.64□□□□□ -2.15
LYST-211ENST00000489585 LCE2DQ5TA82 110 aaPredicted RBP1.61□□□□□ -2.15
LYST-211ENST00000489585 KRTAP12-4P60329 112 aa1.61□□□□□ -2.15
LYST-211ENST00000489585 KRTAP2-2Q9BYT5 123 aa1.6□□□□□ -2.15
LYST-211ENST00000489585 MT1HL1P0DM35 61 aa1.59□□□□□ -2.15
LYST-211ENST00000489585 KRTAP19-5Q3LI72 72 aa1.59□□□□□ -2.15
LYST-211ENST00000489585 KRTAP9-6A8MVA2 160 aa1.59□□□□□ -2.16
LYST-211ENST00000489585 SPRR2GQ9BYE4 73 aa1.59□□□□□ -2.16
LYST-211ENST00000489585 SPRR2FQ96RM1 72 aa1.56□□□□□ -2.16
LYST-211ENST00000489585 LCE3BQ5TA77 95 aa1.56□□□□□ -2.16
LYST-211ENST00000489585 LCE3EQ5T5B0 92 aa1.55□□□□□ -2.16
LYST-211ENST00000489585 FAT4Q6V0I7 4981 aa1.55□□□□□ -2.16
LYST-211ENST00000489585 LCE3DQ9BYE3 92 aa1.55□□□□□ -2.16
LYST-211ENST00000489585 KRTAP4-1Q9BYQ7 146 aa1.54□□□□□ -2.16
LYST-211ENST00000489585 KRTAP6-3Q3LI67 103 aa1.51□□□□□ -2.17
LYST-211ENST00000489585 KRTAP19-1Q8IUB9 90 aa1.5□□□□□ -2.17
LYST-211ENST00000489585 MT2AP02795 61 aa1.48□□□□□ -2.17
LYST-211ENST00000489585 SPRR2EP22531 72 aa1.47□□□□□ -2.17
LYST-211ENST00000489585 SPRR2BP35325 72 aa1.47□□□□□ -2.17
LYST-211ENST00000489585 SPRR2AP35326 72 aa1.47□□□□□ -2.17
LYST-211ENST00000489585 MT1GP13640 62 aa1.46□□□□□ -2.18
LYST-211ENST00000489585 MT1HP80294 61 aa1.45□□□□□ -2.18
LYST-211ENST00000489585 SPRR2DP22532 72 aa1.44□□□□□ -2.18
LYST-211ENST00000489585 PRM1P04553 51 aa1.44□□□□□ -2.18
LYST-211ENST00000489585 LCE2CQ5TA81 110 aa1.43□□□□□ -2.18
LYST-211ENST00000489585 KRTAP9-6A0A140TA67 174 aa1.43□□□□□ -2.18
LYST-211ENST00000489585 MT1XP80297 61 aa1.43□□□□□ -2.18
LYST-211ENST00000489585 LCE4AQ5TA78 99 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms