RNA–Protein interactions for RNA: ENST00000489419.1

CSMD2-209, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2

Gene CSMD2, Length 2,431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-209ENST00000489419 NDUFAF8A1L188 74 aa4.93□□□□□ -1.62
CSMD2-209ENST00000489419 UQCR11O14957 56 aa4.92□□□□□ -1.62
CSMD2-209ENST00000489419 LUZP6Q538Z0 58 aa4.92□□□□□ -1.62
CSMD2-209ENST00000489419 DMAC1Q96GE9 116 aa4.92□□□□□ -1.62
CSMD2-209ENST00000489419 APOBP04114 4563 aaKnown RBP4.89□□□□□ -1.63
CSMD2-209ENST00000489419 A0A1B0GU69 56 aa4.89□□□□□ -1.63
CSMD2-209ENST00000489419 IGKV2D-30A0A075B6S6 120 aa4.86□□□□□ -1.63
CSMD2-209ENST00000489419 HERC2O95714 4834 aa4.86□□□□□ -1.63
CSMD2-209ENST00000489419 RYR2Q92736 4967 aa4.85□□□□□ -1.63
CSMD2-209ENST00000489419 PKHD1L1Q86WI1 4243 aa4.85□□□□□ -1.63
CSMD2-209ENST00000489419 FAT1Q14517 4588 aa4.83□□□□□ -1.64
CSMD2-209ENST00000489419 K7ERS5 55 aa4.82□□□□□ -1.64
CSMD2-209ENST00000489419 KRTAP10-8P60410 259 aa4.81□□□□□ -1.64
CSMD2-209ENST00000489419 KRTAP15-1Q3LI76 137 aa4.8□□□□□ -1.64
CSMD2-209ENST00000489419 C9orf92A6NGG3 77 aa4.78□□□□□ -1.64
CSMD2-209ENST00000489419 Q5VSD8 79 aa4.78□□□□□ -1.64
CSMD2-209ENST00000489419 RYR1P21817 5038 aa4.77□□□□□ -1.65
CSMD2-209ENST00000489419 SPINT4Q6UDR6 99 aa4.77□□□□□ -1.65
CSMD2-209ENST00000489419 Q8N1X5 172 aa4.77□□□□□ -1.65
CSMD2-209ENST00000489419 KMT2CQ8NEZ4 4911 aaKnown RBP4.76□□□□□ -1.65
CSMD2-209ENST00000489419 EPPK1P58107 5090 aaKnown RBP4.76□□□□□ -1.65
CSMD2-209ENST00000489419 FLG2Q5D862 2391 aaPredicted RBP4.74□□□□□ -1.65
CSMD2-209ENST00000489419 KRTAP9-7A8MTY7 169 aa4.74□□□□□ -1.65
CSMD2-209ENST00000489419 HSPG2P98160 4391 aa4.7□□□□□ -1.66
CSMD2-209ENST00000489419 TNXBP22105 4242 aa4.69□□□□□ -1.66
CSMD2-209ENST00000489419 FAT3Q8TDW7 4589 aa4.68□□□□□ -1.66
CSMD2-209ENST00000489419 CRIPTQ9P021 101 aa4.68□□□□□ -1.66
CSMD2-209ENST00000489419 RPL37P61927 97 aaKnown RBP4.66□□□□□ -1.66
CSMD2-209ENST00000489419 KRTAP3-1Q9BYR8 98 aa4.66□□□□□ -1.66
CSMD2-209ENST00000489419 COX6B2Q6YFQ2 88 aa4.66□□□□□ -1.66
CSMD2-209ENST00000489419 MT1HL1P0DM35 61 aa4.65□□□□□ -1.67
CSMD2-209ENST00000489419 LRP1Q07954 4544 aaKnown RBP4.64□□□□□ -1.67
CSMD2-209ENST00000489419 XP32Q5T750 250 aa4.63□□□□□ -1.67
CSMD2-209ENST00000489419 H0YAA0 97 aa4.61□□□□□ -1.67
CSMD2-209ENST00000489419 CRCT1Q9UGL9 99 aa4.6□□□□□ -1.67
CSMD2-209ENST00000489419 DMBT1Q9UGM3 2413 aaPredicted RBP4.58□□□□□ -1.68
CSMD2-209ENST00000489419 TPRXLQ17RH7 258 aa4.56□□□□□ -1.68
CSMD2-209ENST00000489419 A0A1B0GU33 70 aa4.51□□□□□ -1.69
CSMD2-209ENST00000489419 H1FX-AS1Q4G0G2 97 aa4.5□□□□□ -1.69
CSMD2-209ENST00000489419 CAMK2N1Q7Z7J9 78 aa4.48□□□□□ -1.69
CSMD2-209ENST00000489419 S4R3F8 94 aa4.48□□□□□ -1.69
CSMD2-209ENST00000489419 MYCBP2O75592 4640 aa4.48□□□□□ -1.69
CSMD2-209ENST00000489419 MUC2Q02817 5179 aa4.45□□□□□ -1.7
CSMD2-209ENST00000489419 HERC1Q15751 4861 aa4.45□□□□□ -1.7
CSMD2-209ENST00000489419 KRTAP4-5Q9BYR2 181 aa4.45□□□□□ -1.7
CSMD2-209ENST00000489419 KRTAP10-6P60371 365 aaPredicted RBP4.41□□□□□ -1.7
CSMD2-209ENST00000489419 C10orf95Q9H7T3 257 aa4.41□□□□□ -1.7
CSMD2-209ENST00000489419 LRP2P98164 4655 aa4.35□□□□□ -1.71
CSMD2-209ENST00000489419 LOC100996750A0A140TA64 210 aa4.32□□□□□ -1.72
CSMD2-209ENST00000489419 KRTAP4-6Q9BYQ5 205 aa4.32□□□□□ -1.72
CSMD2-209ENST00000489419 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.31□□□□□ -1.72
CSMD2-209ENST00000489419 KRTAP13-4Q3LI77 160 aa4.3□□□□□ -1.72
CSMD2-209ENST00000489419 LPAP08519 4548 aa4.29□□□□□ -1.72
CSMD2-209ENST00000489419 M0QZ58 72 aa4.27□□□□□ -1.73
CSMD2-209ENST00000489419 ABCA13Q86UQ4 5058 aa4.27□□□□□ -1.73
CSMD2-209ENST00000489419 A0A0D9SG42 100 aa4.23□□□□□ -1.73
CSMD2-209ENST00000489419 KRTAP4-1Q9BYQ7 146 aa4.23□□□□□ -1.73
CSMD2-209ENST00000489419 PRO2289Q9P1D8 64 aa4.23□□□□□ -1.73
CSMD2-209ENST00000489419 MUC17Q685J3 4493 aa4.23□□□□□ -1.73
CSMD2-209ENST00000489419 FAT4Q6V0I7 4981 aa4.2□□□□□ -1.74
CSMD2-209ENST00000489419 KRTAP19-2Q3LHN2 52 aa4.2□□□□□ -1.74
CSMD2-209ENST00000489419 PLAC4Q8WY50 150 aa4.2□□□□□ -1.74
CSMD2-209ENST00000489419 GPR98Q8WXG9 6306 aa4.18□□□□□ -1.74
CSMD2-209ENST00000489419 KRTAP12-1P59990 96 aa4.17□□□□□ -1.74
CSMD2-209ENST00000489419 KRTAP12-2P59991 146 aa4.16□□□□□ -1.74
CSMD2-209ENST00000489419 R4GN34 69 aa4.14□□□□□ -1.75
CSMD2-209ENST00000489419 KRTAP20-1Q3LI63 56 aa4.14□□□□□ -1.75
CSMD2-209ENST00000489419 SSPOA2VEC9 5147 aa4.14□□□□□ -1.75
CSMD2-209ENST00000489419 FLGP20930 4061 aaPredicted RBP4.05□□□□□ -1.76
CSMD2-209ENST00000489419 KRTAP23-1A1A580 65 aa4.04□□□□□ -1.76
CSMD2-209ENST00000489419 HMCN2Q8NDA2 5059 aa4.01□□□□□ -1.77
CSMD2-209ENST00000489419 INE1O15225 51 aa3.96□□□□□ -1.77
CSMD2-209ENST00000489419 KRTAP4-8Q9BYQ9 185 aa3.94□□□□□ -1.78
CSMD2-209ENST00000489419 NEBP20929 6669 aa3.88□□□□□ -1.79
CSMD2-209ENST00000489419 MT1HP80294 61 aa3.88□□□□□ -1.79
CSMD2-209ENST00000489419 SPRR2GQ9BYE4 73 aa3.87□□□□□ -1.79
CSMD2-209ENST00000489419 M0R2T5 61 aa3.86□□□□□ -1.79
CSMD2-209ENST00000489419 PP632Q6XCG6 107 aa3.84□□□□□ -1.79
CSMD2-209ENST00000489419 SPRR5A0A1B0GTR4 108 aa3.83□□□□□ -1.8
CSMD2-209ENST00000489419 KRTAP19-1Q8IUB9 90 aa3.82□□□□□ -1.8
CSMD2-209ENST00000489419 LCE4AQ5TA78 99 aa3.8□□□□□ -1.8
CSMD2-209ENST00000489419 RNF213Q63HN8 5207 aa3.79□□□□□ -1.8
CSMD2-209ENST00000489419 MT2AP02795 61 aa3.79□□□□□ -1.8
CSMD2-209ENST00000489419 KRTAP9-8Q9BYQ0 159 aa3.79□□□□□ -1.8
CSMD2-209ENST00000489419 TNP1P09430 55 aa3.78□□□□□ -1.8
CSMD2-209ENST00000489419 KRTAP10-10P60014 251 aa3.78□□□□□ -1.8
CSMD2-209ENST00000489419 MT1FP04733 61 aa3.77□□□□□ -1.81
CSMD2-209ENST00000489419 LCE3BQ5TA77 95 aa3.76□□□□□ -1.81
CSMD2-209ENST00000489419 KRTAP6-3Q3LI67 103 aa3.74□□□□□ -1.81
CSMD2-209ENST00000489419 KRTAP19-8Q3LI54 63 aa3.74□□□□□ -1.81
CSMD2-209ENST00000489419 KRTAP4-12Q9BQ66 201 aa3.73□□□□□ -1.81
CSMD2-209ENST00000489419 KRTAP9-9Q9BYP9 154 aa3.71□□□□□ -1.82
CSMD2-209ENST00000489419 KRTAP9-4Q9BYQ2 154 aa3.71□□□□□ -1.82
CSMD2-209ENST00000489419 KRTAP2-3P0C7H8 128 aa3.7□□□□□ -1.82
CSMD2-209ENST00000489419 KRTAP2-4Q9BYR9 128 aa3.7□□□□□ -1.82
CSMD2-209ENST00000489419 KRTAP9-3Q9BYQ3 159 aa3.64□□□□□ -1.83
CSMD2-209ENST00000489419 MT1BP07438 61 aa3.64□□□□□ -1.83
CSMD2-209ENST00000489419 KRTAP4-8A0A0G2JLE6 195 aa3.63□□□□□ -1.83
CSMD2-209ENST00000489419 KRTAP19-4Q3LI73 84 aa3.63□□□□□ -1.83
CSMD2-209ENST00000489419 KRTAP10-5P60370 271 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms