RNA–Protein interactions for RNA: ENST00000489266.5

NSMCE4A-211, Transcript of NSE4 homolog A, SMC5-SMC6 complex component, humanhuman

TSL 1 (best)

Gene NSMCE4A, Length 2,399 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE4A-211ENST00000489266 KRTAP3-2Q9BYR7 98 aa11□□□□□ -0.65
NSMCE4A-211ENST00000489266 S4R3F8 94 aa10.98□□□□□ -0.65
NSMCE4A-211ENST00000489266 KRTAP3-3Q9BYR6 98 aa10.95□□□□□ -0.66
NSMCE4A-211ENST00000489266 DMBT1Q9UGM3 2413 aaPredicted RBP10.95□□□□□ -0.66
NSMCE4A-211ENST00000489266 SACSQ9NZJ4 4579 aa10.89□□□□□ -0.67
NSMCE4A-211ENST00000489266 KRTAP12-2P59991 146 aa10.89□□□□□ -0.67
NSMCE4A-211ENST00000489266 XP32Q5T750 250 aa10.84□□□□□ -0.67
NSMCE4A-211ENST00000489266 LUZP6Q538Z0 58 aa10.76□□□□□ -0.69
NSMCE4A-211ENST00000489266 PKHD1P08F94 4074 aa10.76□□□□□ -0.69
NSMCE4A-211ENST00000489266 KRTAP12-1P59990 96 aa10.75□□□□□ -0.69
NSMCE4A-211ENST00000489266 PKHD1L1Q86WI1 4243 aa10.72□□□□□ -0.69
NSMCE4A-211ENST00000489266 DYNC1H1Q14204 4646 aaKnown RBP10.63□□□□□ -0.71
NSMCE4A-211ENST00000489266 SMR3BP02814 79 aaPredicted RBP10.55□□□□□ -0.72
NSMCE4A-211ENST00000489266 A0A1B0GVY2 172 aa10.55□□□□□ -0.72
NSMCE4A-211ENST00000489266 KRTAP10-8P60410 259 aa10.5□□□□□ -0.73
NSMCE4A-211ENST00000489266 FAT1Q14517 4588 aa10.49□□□□□ -0.73
NSMCE4A-211ENST00000489266 PLAC4Q8WY50 150 aa10.49□□□□□ -0.73
NSMCE4A-211ENST00000489266 APOBP04114 4563 aaKnown RBP10.49□□□□□ -0.73
NSMCE4A-211ENST00000489266 RYR2Q92736 4967 aa10.44□□□□□ -0.74
NSMCE4A-211ENST00000489266 KRTAP10-4P60372 401 aaPredicted RBP10.43□□□□□ -0.74
NSMCE4A-211ENST00000489266 M0QZ58 72 aa10.42□□□□□ -0.74
NSMCE4A-211ENST00000489266 KMT2CQ8NEZ4 4911 aaKnown RBP10.36□□□□□ -0.75
NSMCE4A-211ENST00000489266 LRP1Q07954 4544 aaKnown RBP10.35□□□□□ -0.75
NSMCE4A-211ENST00000489266 FAT3Q8TDW7 4589 aa10.29□□□□□ -0.76
NSMCE4A-211ENST00000489266 HSPG2P98160 4391 aa10.23□□□□□ -0.77
NSMCE4A-211ENST00000489266 TNXBP22105 4242 aa10.21□□□□□ -0.78
NSMCE4A-211ENST00000489266 MYCBP2O75592 4640 aa10.08□□□□□ -0.8
NSMCE4A-211ENST00000489266 RYR3Q15413 4870 aa10.03□□□□□ -0.8
NSMCE4A-211ENST00000489266 Q5VSD8 79 aa10.03□□□□□ -0.8
NSMCE4A-211ENST00000489266 RYR1P21817 5038 aa9.98□□□□□ -0.81
NSMCE4A-211ENST00000489266 R4GN34 69 aa9.96□□□□□ -0.82
NSMCE4A-211ENST00000489266 PP632Q6XCG6 107 aa9.95□□□□□ -0.82
NSMCE4A-211ENST00000489266 SEC61BP60468 96 aaKnown RBP9.91□□□□□ -0.82
NSMCE4A-211ENST00000489266 KRTAP17-1Q9BYP8 105 aa9.9□□□□□ -0.82
NSMCE4A-211ENST00000489266 KIAA1109Q2LD37 5005 aa9.84□□□□□ -0.83
NSMCE4A-211ENST00000489266 MT1HL1P0DM35 61 aa9.75□□□□□ -0.85
NSMCE4A-211ENST00000489266 LPAP08519 4548 aa9.74□□□□□ -0.85
NSMCE4A-211ENST00000489266 LORP23490 312 aaPredicted RBP9.7□□□□□ -0.86
NSMCE4A-211ENST00000489266 SPRR5A0A1B0GTR4 108 aa9.67□□□□□ -0.86
NSMCE4A-211ENST00000489266 EPPK1P58107 5090 aaKnown RBP9.67□□□□□ -0.86
NSMCE4A-211ENST00000489266 CAMK2N1Q7Z7J9 78 aa9.56□□□□□ -0.88
NSMCE4A-211ENST00000489266 LRP2P98164 4655 aa9.54□□□□□ -0.88
NSMCE4A-211ENST00000489266 PRO2289Q9P1D8 64 aa9.49□□□□□ -0.89
NSMCE4A-211ENST00000489266 KRTAP4-5Q9BYR2 181 aa9.44□□□□□ -0.9
NSMCE4A-211ENST00000489266 ABCA13Q86UQ4 5058 aa9.41□□□□□ -0.9
NSMCE4A-211ENST00000489266 KRTAP23-1A1A580 65 aa9.41□□□□□ -0.9
NSMCE4A-211ENST00000489266 TNP1P09430 55 aa9.32□□□□□ -0.92
NSMCE4A-211ENST00000489266 MUC17Q685J3 4493 aa9.21□□□□□ -0.93
NSMCE4A-211ENST00000489266 INE1O15225 51 aa9.2□□□□□ -0.94
NSMCE4A-211ENST00000489266 HERC2O95714 4834 aa9.15□□□□□ -0.94
NSMCE4A-211ENST00000489266 J3QL48 77 aa9.13□□□□□ -0.95
NSMCE4A-211ENST00000489266 KRTAP4-1Q9BYQ7 146 aa9.06□□□□□ -0.96
NSMCE4A-211ENST00000489266 KRTAP19-2Q3LHN2 52 aa9.05□□□□□ -0.96
NSMCE4A-211ENST00000489266 BIRC6Q9NR09 4857 aa8.97□□□□□ -0.97
NSMCE4A-211ENST00000489266 FLGP20930 4061 aaPredicted RBP8.77□□□□□ -1.01
NSMCE4A-211ENST00000489266 HERC1Q15751 4861 aa8.75□□□□□ -1.01
NSMCE4A-211ENST00000489266 MUC2Q02817 5179 aa8.75□□□□□ -1.01
NSMCE4A-211ENST00000489266 LCE3AQ5TA76 89 aa8.75□□□□□ -1.01
NSMCE4A-211ENST00000489266 PCLOQ9Y6V0 5065 aa8.67□□□□□ -1.02
NSMCE4A-211ENST00000489266 HMCN2Q8NDA2 5059 aa8.63□□□□□ -1.03
NSMCE4A-211ENST00000489266 SPRR2GQ9BYE4 73 aa8.55□□□□□ -1.04
NSMCE4A-211ENST00000489266 KRTAP8-1Q8IUC2 63 aa8.54□□□□□ -1.04
NSMCE4A-211ENST00000489266 KRTAP19-1Q8IUB9 90 aa8.45□□□□□ -1.06
NSMCE4A-211ENST00000489266 LCE2CQ5TA81 110 aa8.39□□□□□ -1.07
NSMCE4A-211ENST00000489266 KRTAP10-12P60413 245 aa8.35□□□□□ -1.07
NSMCE4A-211ENST00000489266 FAT4Q6V0I7 4981 aa8.35□□□□□ -1.07
NSMCE4A-211ENST00000489266 KRTAP12-3P60328 96 aa8.27□□□□□ -1.09
NSMCE4A-211ENST00000489266 RNF213Q63HN8 5207 aa8.25□□□□□ -1.09
NSMCE4A-211ENST00000489266 UBR4Q5T4S7 5183 aa8.22□□□□□ -1.09
NSMCE4A-211ENST00000489266 KRTAP10-10P60014 251 aa8.18□□□□□ -1.1
NSMCE4A-211ENST00000489266 MT1HP80294 61 aa8.16□□□□□ -1.1
NSMCE4A-211ENST00000489266 M0R2T5 61 aa8.15□□□□□ -1.1
NSMCE4A-211ENST00000489266 KRTAP10-5P60370 271 aa8.06□□□□□ -1.12
NSMCE4A-211ENST00000489266 KRTAP19-8Q3LI54 63 aa8.05□□□□□ -1.12
NSMCE4A-211ENST00000489266 MT1XP80297 61 aa8.02□□□□□ -1.13
NSMCE4A-211ENST00000489266 MT2AP02795 61 aa7.98□□□□□ -1.13
NSMCE4A-211ENST00000489266 MT1FP04733 61 aa7.98□□□□□ -1.13
NSMCE4A-211ENST00000489266 KRTAP9-8Q9BYQ0 159 aa7.96□□□□□ -1.13
NSMCE4A-211ENST00000489266 MT1BP07438 61 aa7.9□□□□□ -1.14
NSMCE4A-211ENST00000489266 LCE3CQ5T5A8 94 aa7.85□□□□□ -1.15
NSMCE4A-211ENST00000489266 KRTAP10-7P60409 375 aaPredicted RBP7.84□□□□□ -1.15
NSMCE4A-211ENST00000489266 KRTAP2-3P0C7H8 128 aa7.73□□□□□ -1.17
NSMCE4A-211ENST00000489266 KRTAP2-4Q9BYR9 128 aa7.73□□□□□ -1.17
NSMCE4A-211ENST00000489266 KRTAP2-1Q9BYU5 128 aa7.73□□□□□ -1.17
NSMCE4A-211ENST00000489266 KRTAP9-6A8MVA2 160 aa7.68□□□□□ -1.18
NSMCE4A-211ENST00000489266 KRTAP19-5Q3LI72 72 aa7.64□□□□□ -1.19
NSMCE4A-211ENST00000489266 KRTAP9-3Q9BYQ3 159 aa7.64□□□□□ -1.19
NSMCE4A-211ENST00000489266 LCE2AQ5TA79 106 aaPredicted RBP7.4□□□□□ -1.22
NSMCE4A-211ENST00000489266 LCE2BO14633 110 aa7.35□□□□□ -1.23
NSMCE4A-211ENST00000489266 LCE2DQ5TA82 110 aaPredicted RBP7.32□□□□□ -1.24
NSMCE4A-211ENST00000489266 KRTAP4-7Q9BYR0 210 aa7.25□□□□□ -1.25
NSMCE4A-211ENST00000489266 KRTAP19-4Q3LI73 84 aa7.23□□□□□ -1.25
NSMCE4A-211ENST00000489266 USH2AO75445 5202 aa7.22□□□□□ -1.25
NSMCE4A-211ENST00000489266 KRTAP4-8A0A0G2JLE6 195 aa7.18□□□□□ -1.26
NSMCE4A-211ENST00000489266 KRTAP4-8Q9BYQ9 185 aa7.18□□□□□ -1.26
NSMCE4A-211ENST00000489266 KRTAP19-7Q3SYF9 63 aa7.15□□□□□ -1.27
NSMCE4A-211ENST00000489266 KMT2DO14686 5537 aa7.13□□□□□ -1.27
NSMCE4A-211ENST00000489266 KRTAP12-4P60329 112 aa7.01□□□□□ -1.29
NSMCE4A-211ENST00000489266 MT1LQ93083 61 aa6.99□□□□□ -1.29
NSMCE4A-211ENST00000489266 MT1EP04732 61 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 159.5 ms