RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 A8MUN3 132 aa6.56□□□□□ -1.36
BRCA1-218ENST00000489037 H3BPC8 53 aa6.54□□□□□ -1.36
BRCA1-218ENST00000489037 NDUFC1O43677 76 aa6.54□□□□□ -1.36
BRCA1-218ENST00000489037 KLKP1Q107X0 134 aa6.53□□□□□ -1.36
BRCA1-218ENST00000489037 FCGBPQ9Y6R7 5405 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-218ENST00000489037 K7ERU9 68 aa6.52□□□□□ -1.37
BRCA1-218ENST00000489037 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-218ENST00000489037 KRTAP19-6Q3LI70 58 aa6.51□□□□□ -1.37
BRCA1-218ENST00000489037 IMUPQ9GZP8 106 aa6.51□□□□□ -1.37
BRCA1-218ENST00000489037 CRIPTQ9P021 101 aa6.44□□□□□ -1.38
BRCA1-218ENST00000489037 MT-ATP8P03928 68 aa6.43□□□□□ -1.38
BRCA1-218ENST00000489037 Q5VV11 94 aa6.43□□□□□ -1.38
BRCA1-218ENST00000489037 SPRR2GQ9BYE4 73 aa6.43□□□□□ -1.38
BRCA1-218ENST00000489037 SMIM20Q8N5G0 67 aa6.42□□□□□ -1.38
BRCA1-218ENST00000489037 KRTAP9-7A8MTY7 169 aa6.41□□□□□ -1.38
BRCA1-218ENST00000489037 H0YAA0 97 aa6.41□□□□□ -1.38
BRCA1-218ENST00000489037 TRAV7A0A075B6U4 112 aa6.38□□□□□ -1.39
BRCA1-218ENST00000489037 KRTAP19-8Q3LI54 63 aa6.37□□□□□ -1.39
BRCA1-218ENST00000489037 ADM2Q7Z4H4 148 aa6.36□□□□□ -1.39
BRCA1-218ENST00000489037 DMAC1Q96GE9 116 aa6.36□□□□□ -1.39
BRCA1-218ENST00000489037 MT1BP07438 61 aa6.34□□□□□ -1.39
BRCA1-218ENST00000489037 MACF1Q9UPN3 7388 aaKnown RBP6.33□□□□□ -1.4
BRCA1-218ENST00000489037 A6NN06 94 aa6.31□□□□□ -1.4
BRCA1-218ENST00000489037 ACYP2P14621 99 aa6.29□□□□□ -1.4
BRCA1-218ENST00000489037 C20orf197Q8N268 126 aa6.29□□□□□ -1.4
BRCA1-218ENST00000489037 SYNE2Q8WXH0 6885 aaKnown RBP6.25□□□□□ -1.41
BRCA1-218ENST00000489037 SPTSSBQ8NFR3 76 aa6.24□□□□□ -1.41
BRCA1-218ENST00000489037 SNURFQ9Y675 71 aa6.22□□□□□ -1.41
BRCA1-218ENST00000489037 R4GN34 69 aa6.22□□□□□ -1.41
BRCA1-218ENST00000489037 CHKB-CPT1BH3BT56 60 aa6.2□□□□□ -1.42
BRCA1-218ENST00000489037 KRTAP10-5P60370 271 aa6.2□□□□□ -1.42
BRCA1-218ENST00000489037 SERP2Q8N6R1 65 aa6.19□□□□□ -1.42
BRCA1-218ENST00000489037 P0C880 135 aa6.18□□□□□ -1.42
BRCA1-218ENST00000489037 M0QZ58 72 aa6.16□□□□□ -1.42
BRCA1-218ENST00000489037 PLAC4Q8WY50 150 aa6.16□□□□□ -1.42
BRCA1-218ENST00000489037 KRTAP6-3Q3LI67 103 aa6.14□□□□□ -1.43
BRCA1-218ENST00000489037 SPANXA2-OT1Q8N9U9 137 aa6.14□□□□□ -1.43
BRCA1-218ENST00000489037 PRO2289Q9P1D8 64 aa6.1□□□□□ -1.43
BRCA1-218ENST00000489037 LINC01554Q52M75 96 aa6.07□□□□□ -1.44
BRCA1-218ENST00000489037 COX7CP15954 63 aa6.02□□□□□ -1.45
BRCA1-218ENST00000489037 MT1XP80297 61 aa5.97□□□□□ -1.45
BRCA1-218ENST00000489037 COA5Q86WW8 74 aa5.96□□□□□ -1.46
BRCA1-218ENST00000489037 SEC61GP60059 68 aa5.91□□□□□ -1.46
BRCA1-218ENST00000489037 SERP1Q9Y6X1 66 aa5.89□□□□□ -1.47
BRCA1-218ENST00000489037 H7BZZ5 65 aa5.88□□□□□ -1.47
BRCA1-218ENST00000489037 ANAPC13Q9BS18 74 aa5.88□□□□□ -1.47
BRCA1-218ENST00000489037 KRTAP5-9P26371 169 aa5.87□□□□□ -1.47
BRCA1-218ENST00000489037 MUC12Q9UKN1 5478 aa5.86□□□□□ -1.47
BRCA1-218ENST00000489037 NEBP20929 6669 aa5.85□□□□□ -1.47
BRCA1-218ENST00000489037 KRTAP12-2P59991 146 aa5.84□□□□□ -1.47
BRCA1-218ENST00000489037 CYSTM1Q9H1C7 97 aa5.83□□□□□ -1.48
BRCA1-218ENST00000489037 KMT2DO14686 5537 aa5.8□□□□□ -1.48
BRCA1-218ENST00000489037 KRTAP13-4Q3LI77 160 aa5.79□□□□□ -1.48
BRCA1-218ENST00000489037 KRTAP8-1Q8IUC2 63 aa5.79□□□□□ -1.48
BRCA1-218ENST00000489037 CAMK2N1Q7Z7J9 78 aa5.76□□□□□ -1.49
BRCA1-218ENST00000489037 SPRR2FQ96RM1 72 aa5.76□□□□□ -1.49
BRCA1-218ENST00000489037 A0A1B0GU33 70 aa5.74□□□□□ -1.49
BRCA1-218ENST00000489037 CCDC179H3BU77 68 aa5.71□□□□□ -1.5
BRCA1-218ENST00000489037 A0A0D9SG42 100 aa5.7□□□□□ -1.5
BRCA1-218ENST00000489037 A0A1B0GU69 56 aa5.7□□□□□ -1.5
BRCA1-218ENST00000489037 KRTAP10-7P60409 375 aaPredicted RBP5.7□□□□□ -1.5
BRCA1-218ENST00000489037 MDN1Q9NU22 5596 aa5.69□□□□□ -1.5
BRCA1-218ENST00000489037 KRTAP10-12P60413 245 aa5.69□□□□□ -1.5
BRCA1-218ENST00000489037 ATP5EP56381 51 aaPredicted RBP5.68□□□□□ -1.5
BRCA1-218ENST00000489037 SPATA8Q6RVD6 105 aa5.68□□□□□ -1.5
BRCA1-218ENST00000489037 KRTAP4-8A0A0G2JLE6 195 aa5.67□□□□□ -1.5
BRCA1-218ENST00000489037 KRTAP4-8Q9BYQ9 185 aa5.67□□□□□ -1.5
BRCA1-218ENST00000489037 SPRR2EP22531 72 aa5.66□□□□□ -1.5
BRCA1-218ENST00000489037 SPRR2BP35325 72 aa5.66□□□□□ -1.5
BRCA1-218ENST00000489037 SPRR2AP35326 72 aa5.66□□□□□ -1.5
BRCA1-218ENST00000489037 KRTAP20-1Q3LI63 56 aa5.66□□□□□ -1.5
BRCA1-218ENST00000489037 SPINT4Q6UDR6 99 aa5.64□□□□□ -1.51
BRCA1-218ENST00000489037 SMIM26A0A096LP01 95 aa5.61□□□□□ -1.51
BRCA1-218ENST00000489037 PRR15LQ9BU68 103 aa5.59□□□□□ -1.51
BRCA1-218ENST00000489037 KRTAP2-3P0C7H8 128 aa5.55□□□□□ -1.52
BRCA1-218ENST00000489037 LCE1AQ5T7P2 110 aa5.55□□□□□ -1.52
BRCA1-218ENST00000489037 KRTAP2-4Q9BYR9 128 aa5.55□□□□□ -1.52
BRCA1-218ENST00000489037 KRTAP12-1P59990 96 aa5.54□□□□□ -1.52
BRCA1-218ENST00000489037 TMEM258P61165 79 aa5.54□□□□□ -1.52
BRCA1-218ENST00000489037 LINC01558Q9Y6Z2 57 aa5.49□□□□□ -1.53
BRCA1-218ENST00000489037 A8MU10 97 aa5.48□□□□□ -1.53
BRCA1-218ENST00000489037 SPRR2DP22532 72 aa5.47□□□□□ -1.53
BRCA1-218ENST00000489037 LOC100996750A0A140TA64 210 aa5.4□□□□□ -1.54
BRCA1-218ENST00000489037 KRTAP4-6Q9BYQ5 205 aa5.4□□□□□ -1.54
BRCA1-218ENST00000489037 KRTAP2-2Q9BYT5 123 aa5.38□□□□□ -1.55
BRCA1-218ENST00000489037 KRTAP2-1Q9BYU5 128 aa5.38□□□□□ -1.55
BRCA1-218ENST00000489037 UQCR11O14957 56 aa5.37□□□□□ -1.55
BRCA1-218ENST00000489037 TNP1P09430 55 aa5.33□□□□□ -1.56
BRCA1-218ENST00000489037 KRTAP19-7Q3SYF9 63 aa5.33□□□□□ -1.56
BRCA1-218ENST00000489037 LCE3BQ5TA77 95 aa5.31□□□□□ -1.56
BRCA1-218ENST00000489037 MT1EP04732 61 aa5.29□□□□□ -1.56
BRCA1-218ENST00000489037 C10orf95Q9H7T3 257 aa5.29□□□□□ -1.56
BRCA1-218ENST00000489037 V9GYY9 64 aa5.28□□□□□ -1.56
BRCA1-218ENST00000489037 MIR22HGQ0VDD5 57 aa5.25□□□□□ -1.57
BRCA1-218ENST00000489037 KRTAP19-5Q3LI72 72 aa5.25□□□□□ -1.57
BRCA1-218ENST00000489037 KRTAP19-3Q7Z4W3 81 aa5.25□□□□□ -1.57
BRCA1-218ENST00000489037 LCE5AQ5TCM9 118 aa5.23□□□□□ -1.57
BRCA1-218ENST00000489037 K7ERS5 55 aa5.21□□□□□ -1.58
BRCA1-218ENST00000489037 PSPHP1O15172 72 aa5.19□□□□□ -1.58
BRCA1-218ENST00000489037 Q1T7F1 81 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms