RNA–Protein interactions for RNA: ENST00000488923.1

HDLBP-243, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 582 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-243ENST00000488923 MPLKIPQ8TAP9 179 aa3.7□□□□□ -1.82
HDLBP-243ENST00000488923 RYR2Q92736 4967 aa3.68□□□□□ -1.82
HDLBP-243ENST00000488923 C7orf65Q6ZTY9 151 aa3.68□□□□□ -1.82
HDLBP-243ENST00000488923 DMAC1Q96GE9 116 aa3.68□□□□□ -1.82
HDLBP-243ENST00000488923 VPS13BQ7Z7G8 4022 aa3.68□□□□□ -1.82
HDLBP-243ENST00000488923 HRES1P13985 223 aa3.67□□□□□ -1.82
HDLBP-243ENST00000488923 LCE1EQ5T753 118 aa3.67□□□□□ -1.82
HDLBP-243ENST00000488923 Q5VSD8 79 aa3.67□□□□□ -1.82
HDLBP-243ENST00000488923 C20orf166-AS1Q96NR2 134 aa3.67□□□□□ -1.82
HDLBP-243ENST00000488923 A8MUU9 505 aa3.66□□□□□ -1.82
HDLBP-243ENST00000488923 CHKB-CPT1BH3BT56 60 aa3.66□□□□□ -1.82
HDLBP-243ENST00000488923 APOBP04114 4563 aaKnown RBP3.65□□□□□ -1.83
HDLBP-243ENST00000488923 IGKV2D-30A0A075B6S6 120 aa3.64□□□□□ -1.83
HDLBP-243ENST00000488923 KRTAP10-8P60410 259 aa3.64□□□□□ -1.83
HDLBP-243ENST00000488923 LINC01554Q52M75 96 aa3.64□□□□□ -1.83
HDLBP-243ENST00000488923 PKHD1P08F94 4074 aa3.63□□□□□ -1.83
HDLBP-243ENST00000488923 RETNLBQ9BQ08 111 aa3.63□□□□□ -1.83
HDLBP-243ENST00000488923 LINC01558Q9Y6Z2 57 aa3.63□□□□□ -1.83
HDLBP-243ENST00000488923 SPTSSBQ8NFR3 76 aa3.61□□□□□ -1.83
HDLBP-243ENST00000488923 PRR15LQ9BU68 103 aa3.61□□□□□ -1.83
HDLBP-243ENST00000488923 KRTAP2-2Q9BYT5 123 aa3.61□□□□□ -1.83
HDLBP-243ENST00000488923 C9orf92A6NGG3 77 aa3.6□□□□□ -1.83
HDLBP-243ENST00000488923 PKHD1L1Q86WI1 4243 aa3.59□□□□□ -1.83
HDLBP-243ENST00000488923 A6NN06 94 aa3.59□□□□□ -1.83
HDLBP-243ENST00000488923 Q5VV11 94 aa3.59□□□□□ -1.83
HDLBP-243ENST00000488923 RYR3Q15413 4870 aa3.59□□□□□ -1.84
HDLBP-243ENST00000488923 ATP11AUNQ6ZP68 121 aa3.58□□□□□ -1.84
HDLBP-243ENST00000488923 KMT2CQ8NEZ4 4911 aaKnown RBP3.58□□□□□ -1.84
HDLBP-243ENST00000488923 FAT1Q14517 4588 aa3.57□□□□□ -1.84
HDLBP-243ENST00000488923 SPINK7P58062 85 aa3.56□□□□□ -1.84
HDLBP-243ENST00000488923 A6NED7 52 aa3.55□□□□□ -1.84
HDLBP-243ENST00000488923 RPL37P61927 97 aaKnown RBP3.55□□□□□ -1.84
HDLBP-243ENST00000488923 A0A1B0GU69 56 aa3.54□□□□□ -1.84
HDLBP-243ENST00000488923 RYR1P21817 5038 aa3.52□□□□□ -1.85
HDLBP-243ENST00000488923 MT1HL1P0DM35 61 aa3.52□□□□□ -1.85
HDLBP-243ENST00000488923 COX6B2Q6YFQ2 88 aa3.52□□□□□ -1.85
HDLBP-243ENST00000488923 CDC42SE1Q9NRR8 79 aa3.52□□□□□ -1.85
HDLBP-243ENST00000488923 FLG2Q5D862 2391 aaPredicted RBP3.51□□□□□ -1.85
HDLBP-243ENST00000488923 HSPG2P98160 4391 aa3.51□□□□□ -1.85
HDLBP-243ENST00000488923 TPRXLQ17RH7 258 aa3.5□□□□□ -1.85
HDLBP-243ENST00000488923 KRTAP5-1Q6L8H4 278 aa3.49□□□□□ -1.85
HDLBP-243ENST00000488923 UQCR11O14957 56 aa3.48□□□□□ -1.85
HDLBP-243ENST00000488923 TNXBP22105 4242 aa3.46□□□□□ -1.86
HDLBP-243ENST00000488923 FAT3Q8TDW7 4589 aa3.45□□□□□ -1.86
HDLBP-243ENST00000488923 BIRC6Q9NR09 4857 aa3.45□□□□□ -1.86
HDLBP-243ENST00000488923 EPPK1P58107 5090 aaKnown RBP3.45□□□□□ -1.86
HDLBP-243ENST00000488923 KRTAP5-9P26371 169 aa3.43□□□□□ -1.86
HDLBP-243ENST00000488923 MIR22HGQ0VDD5 57 aa3.43□□□□□ -1.86
HDLBP-243ENST00000488923 SPATA8Q6RVD6 105 aa3.43□□□□□ -1.86
HDLBP-243ENST00000488923 KRTAP5-4Q6L8H1 288 aa3.42□□□□□ -1.86
HDLBP-243ENST00000488923 KIAA1109Q2LD37 5005 aa3.41□□□□□ -1.86
HDLBP-243ENST00000488923 LRP1Q07954 4544 aaKnown RBP3.39□□□□□ -1.87
HDLBP-243ENST00000488923 H1FX-AS1Q4G0G2 97 aa3.39□□□□□ -1.87
HDLBP-243ENST00000488923 S4R3F8 94 aa3.39□□□□□ -1.87
HDLBP-243ENST00000488923 DMBT1Q9UGM3 2413 aaPredicted RBP3.38□□□□□ -1.87
HDLBP-243ENST00000488923 A0A1B0GU33 70 aa3.38□□□□□ -1.87
HDLBP-243ENST00000488923 PRAC1Q96KF2 57 aa3.38□□□□□ -1.87
HDLBP-243ENST00000488923 A8MU10 97 aa3.36□□□□□ -1.87
HDLBP-243ENST00000488923 LUZP6Q538Z0 58 aa3.36□□□□□ -1.87
HDLBP-243ENST00000488923 K7ERS5 55 aa3.35□□□□□ -1.87
HDLBP-243ENST00000488923 ROMO1P60602 79 aa3.35□□□□□ -1.87
HDLBP-243ENST00000488923 ADM2Q7Z4H4 148 aa3.35□□□□□ -1.87
HDLBP-243ENST00000488923 KRTAP4-4Q9BYR3 166 aa3.35□□□□□ -1.87
HDLBP-243ENST00000488923 CSAG1Q6PB30 78 aa3.32□□□□□ -1.88
HDLBP-243ENST00000488923 MYCBP2O75592 4640 aa3.3□□□□□ -1.88
HDLBP-243ENST00000488923 H0YAA0 97 aa3.29□□□□□ -1.88
HDLBP-243ENST00000488923 HERC2O95714 4834 aa3.28□□□□□ -1.88
HDLBP-243ENST00000488923 CAMK2N1Q7Z7J9 78 aa3.28□□□□□ -1.88
HDLBP-243ENST00000488923 M0QZ58 72 aa3.24□□□□□ -1.89
HDLBP-243ENST00000488923 PCLOQ9Y6V0 5065 aa3.24□□□□□ -1.89
HDLBP-243ENST00000488923 ABCA13Q86UQ4 5058 aa3.21□□□□□ -1.9
HDLBP-243ENST00000488923 P0C880 135 aa3.2□□□□□ -1.9
HDLBP-243ENST00000488923 MT3P25713 68 aa3.19□□□□□ -1.9
HDLBP-243ENST00000488923 LRP2P98164 4655 aa3.19□□□□□ -1.9
HDLBP-243ENST00000488923 MUC17Q685J3 4493 aa3.17□□□□□ -1.9
HDLBP-243ENST00000488923 KRTAP4-1Q9BYQ7 146 aa3.16□□□□□ -1.9
HDLBP-243ENST00000488923 A0A0D9SG42 100 aa3.15□□□□□ -1.91
HDLBP-243ENST00000488923 KRTAP10-5P60370 271 aa3.15□□□□□ -1.91
HDLBP-243ENST00000488923 KRTAP13-4Q3LI77 160 aa3.15□□□□□ -1.91
HDLBP-243ENST00000488923 R4GN34 69 aa3.14□□□□□ -1.91
HDLBP-243ENST00000488923 LPAP08519 4548 aa3.13□□□□□ -1.91
HDLBP-243ENST00000488923 KRTAP19-2Q3LHN2 52 aa3.13□□□□□ -1.91
HDLBP-243ENST00000488923 CRIPTQ9P021 101 aa3.12□□□□□ -1.91
HDLBP-243ENST00000488923 KRTAP25-1Q3LHN0 102 aa3.11□□□□□ -1.91
HDLBP-243ENST00000488923 NDUFAF8A1L188 74 aa3.1□□□□□ -1.91
HDLBP-243ENST00000488923 KRTAP9-6A8MVA2 160 aa3.1□□□□□ -1.91
HDLBP-243ENST00000488923 KRTAP12-1P59990 96 aa3.1□□□□□ -1.91
HDLBP-243ENST00000488923 SPINT4Q6UDR6 99 aa3.09□□□□□ -1.91
HDLBP-243ENST00000488923 HERC1Q15751 4861 aa3.08□□□□□ -1.92
HDLBP-243ENST00000488923 KRTAP12-2P59991 146 aa3.07□□□□□ -1.92
HDLBP-243ENST00000488923 HMCN2Q8NDA2 5059 aa3.05□□□□□ -1.92
HDLBP-243ENST00000488923 UBR4Q5T4S7 5183 aa3.04□□□□□ -1.92
HDLBP-243ENST00000488923 M0R2T5 61 aa2.99□□□□□ -1.93
HDLBP-243ENST00000488923 FLGP20930 4061 aaPredicted RBP2.98□□□□□ -1.93
HDLBP-243ENST00000488923 OBSCNQ5VST9 7968 aa2.95□□□□□ -1.94
HDLBP-243ENST00000488923 MT1HP80294 61 aa2.95□□□□□ -1.94
HDLBP-243ENST00000488923 KRTAP4-3Q9BYR4 195 aa2.95□□□□□ -1.94
HDLBP-243ENST00000488923 SPRR2GQ9BYE4 73 aa2.94□□□□□ -1.94
HDLBP-243ENST00000488923 PP632Q6XCG6 107 aa2.92□□□□□ -1.94
HDLBP-243ENST00000488923 PLAC4Q8WY50 150 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms