RNA–Protein interactions for RNA: ENST00000488905.1

HDAC6-231, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 492 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-231ENST00000488905 IMUPQ9GZP8 106 aa8.03□□□□□ -1.12
HDAC6-231ENST00000488905 CRIPTQ9P021 101 aa8.03□□□□□ -1.12
HDAC6-231ENST00000488905 CYP4F30PQ9H0H9 118 aa7.98□□□□□ -1.13
HDAC6-231ENST00000488905 A0A087WVE0 104 aa7.97□□□□□ -1.13
HDAC6-231ENST00000488905 GTF2H5Q6ZYL4 71 aa7.97□□□□□ -1.13
HDAC6-231ENST00000488905 F8W1H4 67 aa7.94□□□□□ -1.14
HDAC6-231ENST00000488905 TRAV22A0A0B4J277 110 aa7.9□□□□□ -1.14
HDAC6-231ENST00000488905 LOC101927531A0A1B0GV80 90 aa7.89□□□□□ -1.15
HDAC6-231ENST00000488905 H0YAA0 97 aa7.86□□□□□ -1.15
HDAC6-231ENST00000488905 ETDBQ3ZM63 59 aa7.86□□□□□ -1.15
HDAC6-231ENST00000488905 PCP4L1A6NKN8 68 aa7.84□□□□□ -1.15
HDAC6-231ENST00000488905 NDUFC1O43677 76 aa7.83□□□□□ -1.16
HDAC6-231ENST00000488905 KRTAP2-3P0C7H8 128 aa7.82□□□□□ -1.16
HDAC6-231ENST00000488905 KRTAP2-4Q9BYR9 128 aa7.82□□□□□ -1.16
HDAC6-231ENST00000488905 SPRR2FQ96RM1 72 aa7.81□□□□□ -1.16
HDAC6-231ENST00000488905 PRO2289Q9P1D8 64 aa7.79□□□□□ -1.16
HDAC6-231ENST00000488905 A8MUN3 132 aa7.78□□□□□ -1.16
HDAC6-231ENST00000488905 SPRR2EP22531 72 aa7.77□□□□□ -1.17
HDAC6-231ENST00000488905 SPRR2BP35325 72 aa7.77□□□□□ -1.17
HDAC6-231ENST00000488905 SPRR2AP35326 72 aa7.77□□□□□ -1.17
HDAC6-231ENST00000488905 MT1XP80297 61 aa7.76□□□□□ -1.17
HDAC6-231ENST00000488905 ADM2Q7Z4H4 148 aa7.76□□□□□ -1.17
HDAC6-231ENST00000488905 ACYP1P07311 99 aa7.75□□□□□ -1.17
HDAC6-231ENST00000488905 H0Y9P7 68 aa7.73□□□□□ -1.17
HDAC6-231ENST00000488905 ATOX1O00244 68 aa7.72□□□□□ -1.17
HDAC6-231ENST00000488905 UQCRQO14949 82 aa7.71□□□□□ -1.18
HDAC6-231ENST00000488905 FAM240AA0A1B0GVK7 77 aa7.69□□□□□ -1.18
HDAC6-231ENST00000488905 KRTAP8-1Q8IUC2 63 aa7.68□□□□□ -1.18
HDAC6-231ENST00000488905 ATP5EP2Q5VTU8 51 aa7.67□□□□□ -1.18
HDAC6-231ENST00000488905 PLAC4Q8WY50 150 aa7.67□□□□□ -1.18
HDAC6-231ENST00000488905 HIST1H4AP62805 103 aaKnown RBP7.64□□□□□ -1.19
HDAC6-231ENST00000488905 KRTAP12-2P59991 146 aa7.63□□□□□ -1.19
HDAC6-231ENST00000488905 KRTAP4-8Q9BYQ9 185 aa7.63□□□□□ -1.19
HDAC6-231ENST00000488905 LCE1AQ5T7P2 110 aa7.62□□□□□ -1.19
HDAC6-231ENST00000488905 R4GN34 69 aa7.6□□□□□ -1.19
HDAC6-231ENST00000488905 LINC00208Q96KT6 92 aa7.56□□□□□ -1.2
HDAC6-231ENST00000488905 KRTAP2-2Q9BYT5 123 aa7.56□□□□□ -1.2
HDAC6-231ENST00000488905 KRTAP2-1Q9BYU5 128 aa7.56□□□□□ -1.2
HDAC6-231ENST00000488905 P0C880 135 aa7.55□□□□□ -1.2
HDAC6-231ENST00000488905 LINC00643Q86TS7 51 aa7.54□□□□□ -1.2
HDAC6-231ENST00000488905 C20orf197Q8N268 126 aa7.53□□□□□ -1.2
HDAC6-231ENST00000488905 M0QZ58 72 aa7.52□□□□□ -1.21
HDAC6-231ENST00000488905 SPRR2DP22532 72 aa7.51□□□□□ -1.21
HDAC6-231ENST00000488905 KRTAP4-8A0A0G2JLE6 195 aa7.49□□□□□ -1.21
HDAC6-231ENST00000488905 MP68P56378 58 aa7.48□□□□□ -1.21
HDAC6-231ENST00000488905 OCR1Q9BZK8 76 aa7.45□□□□□ -1.22
HDAC6-231ENST00000488905 LINC01554Q52M75 96 aa7.43□□□□□ -1.22
HDAC6-231ENST00000488905 A0A1B0GV90 55 aa7.42□□□□□ -1.22
HDAC6-231ENST00000488905 KRTAP10-7P60409 375 aaPredicted RBP7.39□□□□□ -1.23
HDAC6-231ENST00000488905 DMAC1Q96GE9 116 aa7.39□□□□□ -1.23
HDAC6-231ENST00000488905 KRTAP10-12P60413 245 aa7.36□□□□□ -1.23
HDAC6-231ENST00000488905 J3QR89 54 aa7.35□□□□□ -1.23
HDAC6-231ENST00000488905 LCE3BQ5TA77 95 aa7.33□□□□□ -1.24
HDAC6-231ENST00000488905 H3BPC8 53 aa7.32□□□□□ -1.24
HDAC6-231ENST00000488905 KRTAP4-12Q9BQ66 201 aa7.26□□□□□ -1.25
HDAC6-231ENST00000488905 SCGB1A1P11684 91 aa7.23□□□□□ -1.25
HDAC6-231ENST00000488905 MT-ATP8P03928 68 aa7.22□□□□□ -1.25
HDAC6-231ENST00000488905 TRAV7A0A075B6U4 112 aa7.21□□□□□ -1.26
HDAC6-231ENST00000488905 KRTAP9-9Q9BYP9 154 aa7.16□□□□□ -1.26
HDAC6-231ENST00000488905 KRTAP9-4Q9BYQ2 154 aa7.16□□□□□ -1.26
HDAC6-231ENST00000488905 ACYP2P14621 99 aa7.12□□□□□ -1.27
HDAC6-231ENST00000488905 SPTSSBQ8NFR3 76 aa7.11□□□□□ -1.27
HDAC6-231ENST00000488905 SMIM20Q8N5G0 67 aa7.07□□□□□ -1.28
HDAC6-231ENST00000488905 K7ERU9 68 aa7.05□□□□□ -1.28
HDAC6-231ENST00000488905 GPR98Q8WXG9 6306 aa7.03□□□□□ -1.28
HDAC6-231ENST00000488905 DSTQ03001 7570 aaKnown RBP7.02□□□□□ -1.29
HDAC6-231ENST00000488905 CHKB-CPT1BH3BT56 60 aa7□□□□□ -1.29
HDAC6-231ENST00000488905 LCE5AQ5TCM9 118 aa6.95□□□□□ -1.3
HDAC6-231ENST00000488905 KRTAP13-4Q3LI77 160 aa6.94□□□□□ -1.3
HDAC6-231ENST00000488905 KRTAP19-7Q3SYF9 63 aa6.93□□□□□ -1.3
HDAC6-231ENST00000488905 CAMK2N1Q7Z7J9 78 aa6.93□□□□□ -1.3
HDAC6-231ENST00000488905 MT1EP04732 61 aa6.9□□□□□ -1.3
HDAC6-231ENST00000488905 KRTAP19-3Q7Z4W3 81 aa6.9□□□□□ -1.3
HDAC6-231ENST00000488905 KRTAP4-9Q9BYQ8 210 aa6.88□□□□□ -1.31
HDAC6-231ENST00000488905 SPANXA2-OT1Q8N9U9 137 aa6.83□□□□□ -1.32
HDAC6-231ENST00000488905 SNURFQ9Y675 71 aa6.83□□□□□ -1.32
HDAC6-231ENST00000488905 SERP2Q8N6R1 65 aa6.79□□□□□ -1.32
HDAC6-231ENST00000488905 KRTAP4-7Q9BYR0 210 aa6.78□□□□□ -1.32
HDAC6-231ENST00000488905 CYSTM1Q9H1C7 97 aa6.75□□□□□ -1.33
HDAC6-231ENST00000488905 LCE1DQ5T752 114 aa6.74□□□□□ -1.33
HDAC6-231ENST00000488905 HMCN1Q96RW7 5635 aa6.7□□□□□ -1.34
HDAC6-231ENST00000488905 A0A0D9SG42 100 aa6.7□□□□□ -1.34
HDAC6-231ENST00000488905 MT1GP13640 62 aa6.67□□□□□ -1.34
HDAC6-231ENST00000488905 KRTAP19-5Q3LI72 72 aa6.67□□□□□ -1.34
HDAC6-231ENST00000488905 PP632Q6XCG6 107 aa6.64□□□□□ -1.35
HDAC6-231ENST00000488905 LCE4AQ5TA78 99 aa6.61□□□□□ -1.35
HDAC6-231ENST00000488905 SPATA8Q6RVD6 105 aa6.6□□□□□ -1.35
HDAC6-231ENST00000488905 SPINT4Q6UDR6 99 aa6.6□□□□□ -1.35
HDAC6-231ENST00000488905 COA5Q86WW8 74 aa6.6□□□□□ -1.35
HDAC6-231ENST00000488905 MT4P47944 62 aa6.59□□□□□ -1.35
HDAC6-231ENST00000488905 AHNAK2Q8IVF2 5795 aa6.58□□□□□ -1.36
HDAC6-231ENST00000488905 SEC61GP60059 68 aa6.58□□□□□ -1.36
HDAC6-231ENST00000488905 MT1MQ8N339 61 aa6.58□□□□□ -1.36
HDAC6-231ENST00000488905 SERP1Q9Y6X1 66 aa6.58□□□□□ -1.36
HDAC6-231ENST00000488905 COX7CP15954 63 aa6.57□□□□□ -1.36
HDAC6-231ENST00000488905 KRTAP12-1P59990 96 aa6.54□□□□□ -1.36
HDAC6-231ENST00000488905 MT1LQ93083 61 aa6.54□□□□□ -1.36
HDAC6-231ENST00000488905 KRTAP4-2Q9BYR5 136 aa6.54□□□□□ -1.36
HDAC6-231ENST00000488905 A0A1B0GU33 70 aa6.5□□□□□ -1.37
HDAC6-231ENST00000488905 H7BZZ5 65 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms