RNA–Protein interactions for RNA: ENST00000488053.1

TNFSF4-203, Transcript of TNF superfamily member 4, humanhuman

TSL 3

Gene TNFSF4, Length 520 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF4-203ENST00000488053 C8orf87E5RJ46 101 aa3.49□□□□□ -1.85
TNFSF4-203ENST00000488053 C1orf64Q8NEQ6 169 aa3.49□□□□□ -1.85
TNFSF4-203ENST00000488053 Q9BRP9 147 aa3.49□□□□□ -1.85
TNFSF4-203ENST00000488053 A0A1B0GW54 56 aa3.48□□□□□ -1.85
TNFSF4-203ENST00000488053 CHKB-CPT1BH3BT56 60 aa3.48□□□□□ -1.85
TNFSF4-203ENST00000488053 PSPHP1O15172 72 aa3.48□□□□□ -1.85
TNFSF4-203ENST00000488053 HCG22E2RYF7 251 aa3.47□□□□□ -1.85
TNFSF4-203ENST00000488053 Q6ZRX8 168 aa3.47□□□□□ -1.85
TNFSF4-203ENST00000488053 SSBP3-AS1Q7Z2R9 100 aa3.47□□□□□ -1.85
TNFSF4-203ENST00000488053 A6NN06 94 aa3.46□□□□□ -1.86
TNFSF4-203ENST00000488053 RPS29P62273 56 aaKnown RBP3.46□□□□□ -1.86
TNFSF4-203ENST00000488053 Q5VV11 94 aa3.46□□□□□ -1.86
TNFSF4-203ENST00000488053 LINC00575Q6W349 94 aa3.46□□□□□ -1.86
TNFSF4-203ENST00000488053 ST20-AS1Q8NBB2 130 aa3.46□□□□□ -1.86
TNFSF4-203ENST00000488053 SPTSSBQ8NFR3 76 aa3.46□□□□□ -1.86
TNFSF4-203ENST00000488053 CDC42SE1Q9NRR8 79 aa3.46□□□□□ -1.86
TNFSF4-203ENST00000488053 CRCT1Q9UGL9 99 aa3.46□□□□□ -1.86
TNFSF4-203ENST00000488053 C9orf92A6NGG3 77 aa3.45□□□□□ -1.86
TNFSF4-203ENST00000488053 A8MUN3 132 aa3.45□□□□□ -1.86
TNFSF4-203ENST00000488053 COX7BP24311 80 aa3.45□□□□□ -1.86
TNFSF4-203ENST00000488053 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.45□□□□□ -1.86
TNFSF4-203ENST00000488053 IGLV8-61A0A075B6I0 122 aa3.44□□□□□ -1.86
TNFSF4-203ENST00000488053 PCOTHQ58A44 107 aa3.44□□□□□ -1.86
TNFSF4-203ENST00000488053 SPANXA2-OT1Q8N9U9 137 aa3.44□□□□□ -1.86
TNFSF4-203ENST00000488053 LOC101927531A0A1B0GV80 90 aa3.43□□□□□ -1.86
TNFSF4-203ENST00000488053 A6NED7 52 aa3.43□□□□□ -1.86
TNFSF4-203ENST00000488053 H3BPC8 53 aa3.43□□□□□ -1.86
TNFSF4-203ENST00000488053 IGLV6-57P01721 117 aa3.43□□□□□ -1.86
TNFSF4-203ENST00000488053 IGKV4-1P06312 121 aa3.43□□□□□ -1.86
TNFSF4-203ENST00000488053 MT1HP80294 61 aa3.43□□□□□ -1.86
TNFSF4-203ENST00000488053 KRTAP19-2Q3LHN2 52 aa3.43□□□□□ -1.86
TNFSF4-203ENST00000488053 ZCCHC13Q8WW36 166 aaKnown RBP3.43□□□□□ -1.86
TNFSF4-203ENST00000488053 MP68P56378 58 aa3.42□□□□□ -1.86
TNFSF4-203ENST00000488053 PRR15LQ9BU68 103 aa3.42□□□□□ -1.86
TNFSF4-203ENST00000488053 FLGP20930 4061 aaPredicted RBP3.41□□□□□ -1.86
TNFSF4-203ENST00000488053 C6orf99Q4VX62 202 aa3.41□□□□□ -1.86
TNFSF4-203ENST00000488053 LINC00208Q96KT6 92 aa3.41□□□□□ -1.86
TNFSF4-203ENST00000488053 LINC01554Q52M75 96 aa3.4□□□□□ -1.87
TNFSF4-203ENST00000488053 DEFB105AQ8NG35 78 aa3.4□□□□□ -1.87
TNFSF4-203ENST00000488053 CASC2Q6XLA1 102 aa3.39□□□□□ -1.87
TNFSF4-203ENST00000488053 A0A0G2JQZ4 141 aa3.38□□□□□ -1.87
TNFSF4-203ENST00000488053 SPRR1BP22528 89 aa3.38□□□□□ -1.87
TNFSF4-203ENST00000488053 Q6ZQY7 126 aa3.38□□□□□ -1.87
TNFSF4-203ENST00000488053 FSIP2Q5CZC0 6907 aa3.37□□□□□ -1.87
TNFSF4-203ENST00000488053 M0R2T5 61 aa3.37□□□□□ -1.87
TNFSF4-203ENST00000488053 COX6B2Q6YFQ2 88 aa3.36□□□□□ -1.87
TNFSF4-203ENST00000488053 LINC01558Q9Y6Z2 57 aa3.36□□□□□ -1.87
TNFSF4-203ENST00000488053 LINC00313P59037 77 aa3.34□□□□□ -1.87
TNFSF4-203ENST00000488053 RPL37P61927 97 aaKnown RBP3.34□□□□□ -1.87
TNFSF4-203ENST00000488053 LCE3EQ5T5B0 92 aa3.33□□□□□ -1.88
TNFSF4-203ENST00000488053 Q8N9L7 120 aa3.32□□□□□ -1.88
TNFSF4-203ENST00000488053 KRTAP12-2P59991 146 aa3.31□□□□□ -1.88
TNFSF4-203ENST00000488053 IGLV5-48A0A075B6I7 105 aa3.3□□□□□ -1.88
TNFSF4-203ENST00000488053 COA5Q86WW8 74 aa3.3□□□□□ -1.88
TNFSF4-203ENST00000488053 H0Y9P7 68 aa3.28□□□□□ -1.88
TNFSF4-203ENST00000488053 IGFL1Q6UW32 110 aa3.26□□□□□ -1.89
TNFSF4-203ENST00000488053 K7EQZ3 153 aa3.24□□□□□ -1.89
TNFSF4-203ENST00000488053 Q96NJ1 140 aa3.24□□□□□ -1.89
TNFSF4-203ENST00000488053 SSPOA2VEC9 5147 aa3.24□□□□□ -1.89
TNFSF4-203ENST00000488053 USH2AO75445 5202 aa3.23□□□□□ -1.89
TNFSF4-203ENST00000488053 IGHV6-1A0A0B4J1U7 121 aa3.23□□□□□ -1.89
TNFSF4-203ENST00000488053 A0A1W2PNM2 257 aa3.23□□□□□ -1.89
TNFSF4-203ENST00000488053 SPINK7P58062 85 aa3.23□□□□□ -1.89
TNFSF4-203ENST00000488053 TP53AIP1Q9HCN2 124 aa3.23□□□□□ -1.89
TNFSF4-203ENST00000488053 SPATA8Q6RVD6 105 aa3.21□□□□□ -1.9
TNFSF4-203ENST00000488053 WFDC13Q8IUB5 93 aa3.21□□□□□ -1.9
TNFSF4-203ENST00000488053 C20orf166-AS1Q96NR2 134 aa3.19□□□□□ -1.9
TNFSF4-203ENST00000488053 A8MUU9 505 aa3.18□□□□□ -1.9
TNFSF4-203ENST00000488053 A8MWP4 228 aa3.18□□□□□ -1.9
TNFSF4-203ENST00000488053 A0A087WSZ3 146 aa3.17□□□□□ -1.9
TNFSF4-203ENST00000488053 UQCR11O14957 56 aa3.17□□□□□ -1.9
TNFSF4-203ENST00000488053 ACYP2P14621 99 aa3.17□□□□□ -1.9
TNFSF4-203ENST00000488053 KRTAP5-1Q6L8H4 278 aa3.17□□□□□ -1.9
TNFSF4-203ENST00000488053 A0A1B0GU69 56 aa3.16□□□□□ -1.9
TNFSF4-203ENST00000488053 MT2AP02795 61 aa3.16□□□□□ -1.9
TNFSF4-203ENST00000488053 MIR22HGQ0VDD5 57 aa3.16□□□□□ -1.9
TNFSF4-203ENST00000488053 CSAG1Q6PB30 78 aa3.16□□□□□ -1.9
TNFSF4-203ENST00000488053 FCGBPQ9Y6R7 5405 aaPredicted RBP3.15□□□□□ -1.9
TNFSF4-203ENST00000488053 HRES1P13985 223 aa3.15□□□□□ -1.91
TNFSF4-203ENST00000488053 ROMO1P60602 79 aa3.15□□□□□ -1.91
TNFSF4-203ENST00000488053 ADM2Q7Z4H4 148 aa3.15□□□□□ -1.91
TNFSF4-203ENST00000488053 MT1FP04733 61 aa3.14□□□□□ -1.91
TNFSF4-203ENST00000488053 DEFB116Q30KQ4 102 aa3.14□□□□□ -1.91
TNFSF4-203ENST00000488053 KRTAP10-10P60014 251 aa3.13□□□□□ -1.91
TNFSF4-203ENST00000488053 KRTAP25-1Q3LHN0 102 aa3.1□□□□□ -1.91
TNFSF4-203ENST00000488053 MMP24-AS1A0A0U1RRL7 71 aa3.09□□□□□ -1.91
TNFSF4-203ENST00000488053 LINC00472Q9H8W2 130 aa3.09□□□□□ -1.91
TNFSF4-203ENST00000488053 DMAC1Q96GE9 116 aa3.06□□□□□ -1.92
TNFSF4-203ENST00000488053 MRPL34Q9BQ48 92 aaKnown RBP3.06□□□□□ -1.92
TNFSF4-203ENST00000488053 C8orf17Q9NRJ1 99 aa3.06□□□□□ -1.92
TNFSF4-203ENST00000488053 A0A1B0GVX0 72 aa3.03□□□□□ -1.92
TNFSF4-203ENST00000488053 KRTAP19-6Q3LI70 58 aa3.03□□□□□ -1.92
TNFSF4-203ENST00000488053 K7ERS5 55 aa3.02□□□□□ -1.93
TNFSF4-203ENST00000488053 MACF1Q9UPN3 7388 aaKnown RBP3.01□□□□□ -1.93
TNFSF4-203ENST00000488053 LCE3AQ5TA76 89 aa3.01□□□□□ -1.93
TNFSF4-203ENST00000488053 KRTAP5-4Q6L8H1 288 aa3□□□□□ -1.93
TNFSF4-203ENST00000488053 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
TNFSF4-203ENST00000488053 P0C880 135 aa2.97□□□□□ -1.93
TNFSF4-203ENST00000488053 SPINT4Q6UDR6 99 aa2.96□□□□□ -1.94
TNFSF4-203ENST00000488053 SYNE2Q8WXH0 6885 aaKnown RBP2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms