RNA–Protein interactions for RNA: ENST00000487989.1

PFKFB3-213, Transcript of 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3, humanhuman

TSL 2

Gene PFKFB3, Length 661 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFKFB3-213ENST00000487989 SCGB1A1P11684 91 aa6.48□□□□□ -1.37
PFKFB3-213ENST00000487989 KRTAP19-6Q3LI70 58 aa6.45□□□□□ -1.38
PFKFB3-213ENST00000487989 A8MUN3 132 aa6.44□□□□□ -1.38
PFKFB3-213ENST00000487989 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.44□□□□□ -1.38
PFKFB3-213ENST00000487989 H3BPC8 53 aa6.43□□□□□ -1.38
PFKFB3-213ENST00000487989 K7ERU9 68 aa6.43□□□□□ -1.38
PFKFB3-213ENST00000487989 NDUFC1O43677 76 aa6.43□□□□□ -1.38
PFKFB3-213ENST00000487989 IMUPQ9GZP8 106 aa6.41□□□□□ -1.38
PFKFB3-213ENST00000487989 MT-ATP8P03928 68 aa6.4□□□□□ -1.38
PFKFB3-213ENST00000487989 SPRR2GQ9BYE4 73 aa6.38□□□□□ -1.39
PFKFB3-213ENST00000487989 KRTAP9-7A8MTY7 169 aa6.33□□□□□ -1.4
PFKFB3-213ENST00000487989 Q5VV11 94 aa6.33□□□□□ -1.4
PFKFB3-213ENST00000487989 H0YAA0 97 aa6.32□□□□□ -1.4
PFKFB3-213ENST00000487989 KRTAP19-8Q3LI54 63 aa6.32□□□□□ -1.4
PFKFB3-213ENST00000487989 CRIPTQ9P021 101 aa6.32□□□□□ -1.4
PFKFB3-213ENST00000487989 MACF1Q9UPN3 7388 aaKnown RBP6.32□□□□□ -1.4
PFKFB3-213ENST00000487989 MT1BP07438 61 aa6.31□□□□□ -1.4
PFKFB3-213ENST00000487989 SMIM20Q8N5G0 67 aa6.31□□□□□ -1.4
PFKFB3-213ENST00000487989 TRAV7A0A075B6U4 112 aa6.3□□□□□ -1.4
PFKFB3-213ENST00000487989 DMAC1Q96GE9 116 aa6.29□□□□□ -1.4
PFKFB3-213ENST00000487989 ADM2Q7Z4H4 148 aa6.28□□□□□ -1.4
PFKFB3-213ENST00000487989 SYNE2Q8WXH0 6885 aaKnown RBP6.22□□□□□ -1.41
PFKFB3-213ENST00000487989 A6NN06 94 aa6.21□□□□□ -1.42
PFKFB3-213ENST00000487989 ACYP2P14621 99 aa6.18□□□□□ -1.42
PFKFB3-213ENST00000487989 SNURFQ9Y675 71 aa6.16□□□□□ -1.42
PFKFB3-213ENST00000487989 KRTAP10-5P60370 271 aa6.15□□□□□ -1.42
PFKFB3-213ENST00000487989 P0C880 135 aa6.14□□□□□ -1.43
PFKFB3-213ENST00000487989 C20orf197Q8N268 126 aa6.14□□□□□ -1.43
PFKFB3-213ENST00000487989 PCP4P48539 62 aa6.13□□□□□ -1.43
PFKFB3-213ENST00000487989 SERP2Q8N6R1 65 aa6.12□□□□□ -1.43
PFKFB3-213ENST00000487989 R4GN34 69 aa6.11□□□□□ -1.43
PFKFB3-213ENST00000487989 KRTAP3-2Q9BYR7 98 aa6.1□□□□□ -1.43
PFKFB3-213ENST00000487989 SPTSSBQ8NFR3 76 aa6.09□□□□□ -1.43
PFKFB3-213ENST00000487989 CHKB-CPT1BH3BT56 60 aa6.08□□□□□ -1.44
PFKFB3-213ENST00000487989 M0QZ58 72 aa6.07□□□□□ -1.44
PFKFB3-213ENST00000487989 KRTAP6-3Q3LI67 103 aa6.06□□□□□ -1.44
PFKFB3-213ENST00000487989 SPANXA2-OT1Q8N9U9 137 aa6.06□□□□□ -1.44
PFKFB3-213ENST00000487989 PLAC4Q8WY50 150 aa6.03□□□□□ -1.44
PFKFB3-213ENST00000487989 LINC01554Q52M75 96 aa5.99□□□□□ -1.45
PFKFB3-213ENST00000487989 PRO2289Q9P1D8 64 aa5.97□□□□□ -1.45
PFKFB3-213ENST00000487989 COX7CP15954 63 aa5.96□□□□□ -1.46
PFKFB3-213ENST00000487989 MT1XP80297 61 aa5.94□□□□□ -1.46
PFKFB3-213ENST00000487989 COA5Q86WW8 74 aa5.89□□□□□ -1.47
PFKFB3-213ENST00000487989 CYSTM1Q9H1C7 97 aa5.85□□□□□ -1.47
PFKFB3-213ENST00000487989 H7BZZ5 65 aa5.84□□□□□ -1.47
PFKFB3-213ENST00000487989 NEBP20929 6669 aa5.82□□□□□ -1.48
PFKFB3-213ENST00000487989 KRTAP5-9P26371 169 aa5.82□□□□□ -1.48
PFKFB3-213ENST00000487989 SVIPQ8NHG7 77 aa5.81□□□□□ -1.48
PFKFB3-213ENST00000487989 ANAPC13Q9BS18 74 aa5.81□□□□□ -1.48
PFKFB3-213ENST00000487989 MUC12Q9UKN1 5478 aa5.8□□□□□ -1.48
PFKFB3-213ENST00000487989 KRTAP12-2P59991 146 aa5.77□□□□□ -1.49
PFKFB3-213ENST00000487989 SEC61GP60059 68 aa5.77□□□□□ -1.49
PFKFB3-213ENST00000487989 KRTAP13-4Q3LI77 160 aa5.77□□□□□ -1.49
PFKFB3-213ENST00000487989 KMT2DO14686 5537 aa5.76□□□□□ -1.49
PFKFB3-213ENST00000487989 SERP1Q9Y6X1 66 aa5.75□□□□□ -1.49
PFKFB3-213ENST00000487989 MDN1Q9NU22 5596 aa5.72□□□□□ -1.49
PFKFB3-213ENST00000487989 KRTAP8-1Q8IUC2 63 aa5.71□□□□□ -1.5
PFKFB3-213ENST00000487989 SPRR2FQ96RM1 72 aa5.69□□□□□ -1.5
PFKFB3-213ENST00000487989 CCDC179H3BU77 68 aa5.68□□□□□ -1.5
PFKFB3-213ENST00000487989 KRTAP10-7P60409 375 aaPredicted RBP5.68□□□□□ -1.5
PFKFB3-213ENST00000487989 KRTAP4-8A0A0G2JLE6 195 aa5.66□□□□□ -1.5
PFKFB3-213ENST00000487989 KRTAP4-8Q9BYQ9 185 aa5.66□□□□□ -1.5
PFKFB3-213ENST00000487989 A0A1B0GU33 70 aa5.65□□□□□ -1.5
PFKFB3-213ENST00000487989 KRTAP10-12P60413 245 aa5.65□□□□□ -1.5
PFKFB3-213ENST00000487989 CAMK2N1Q7Z7J9 78 aa5.65□□□□□ -1.5
PFKFB3-213ENST00000487989 SPATA8Q6RVD6 105 aa5.64□□□□□ -1.51
PFKFB3-213ENST00000487989 A0A0D9SG42 100 aa5.63□□□□□ -1.51
PFKFB3-213ENST00000487989 A0A1B0GU69 56 aa5.6□□□□□ -1.51
PFKFB3-213ENST00000487989 SPRR2EP22531 72 aa5.58□□□□□ -1.52
PFKFB3-213ENST00000487989 SPRR2BP35325 72 aa5.58□□□□□ -1.52
PFKFB3-213ENST00000487989 SPRR2AP35326 72 aa5.58□□□□□ -1.52
PFKFB3-213ENST00000487989 RPS28P62857 69 aaKnown RBP5.58□□□□□ -1.52
PFKFB3-213ENST00000487989 ATP5EP56381 51 aaPredicted RBP5.57□□□□□ -1.52
PFKFB3-213ENST00000487989 KRTAP20-1Q3LI63 56 aa5.56□□□□□ -1.52
PFKFB3-213ENST00000487989 SPINT4Q6UDR6 99 aa5.55□□□□□ -1.52
PFKFB3-213ENST00000487989 TMEM258P61165 79 aa5.54□□□□□ -1.52
PFKFB3-213ENST00000487989 KRTAP12-1P59990 96 aa5.51□□□□□ -1.53
PFKFB3-213ENST00000487989 LCE1AQ5T7P2 110 aa5.51□□□□□ -1.53
PFKFB3-213ENST00000487989 SMIM26A0A096LP01 95 aa5.49□□□□□ -1.53
PFKFB3-213ENST00000487989 KRTAP2-3P0C7H8 128 aa5.46□□□□□ -1.54
PFKFB3-213ENST00000487989 PRR15LQ9BU68 103 aa5.46□□□□□ -1.54
PFKFB3-213ENST00000487989 KRTAP2-4Q9BYR9 128 aa5.46□□□□□ -1.54
PFKFB3-213ENST00000487989 A8MU10 97 aa5.45□□□□□ -1.54
PFKFB3-213ENST00000487989 LINC01558Q9Y6Z2 57 aa5.42□□□□□ -1.54
PFKFB3-213ENST00000487989 SPRR2DP22532 72 aa5.4□□□□□ -1.54
PFKFB3-213ENST00000487989 KRTAP19-7Q3SYF9 63 aa5.3□□□□□ -1.56
PFKFB3-213ENST00000487989 KRTAP2-2Q9BYT5 123 aa5.29□□□□□ -1.56
PFKFB3-213ENST00000487989 KRTAP2-1Q9BYU5 128 aa5.29□□□□□ -1.56
PFKFB3-213ENST00000487989 UQCR11O14957 56 aa5.28□□□□□ -1.56
PFKFB3-213ENST00000487989 MT1EP04732 61 aa5.26□□□□□ -1.57
PFKFB3-213ENST00000487989 C10orf95Q9H7T3 257 aa5.26□□□□□ -1.57
PFKFB3-213ENST00000487989 LCE3BQ5TA77 95 aa5.24□□□□□ -1.57
PFKFB3-213ENST00000487989 TNP1P09430 55 aa5.22□□□□□ -1.57
PFKFB3-213ENST00000487989 KRTAP19-5Q3LI72 72 aa5.22□□□□□ -1.57
PFKFB3-213ENST00000487989 LCE5AQ5TCM9 118 aa5.19□□□□□ -1.58
PFKFB3-213ENST00000487989 KRTAP19-3Q7Z4W3 81 aa5.19□□□□□ -1.58
PFKFB3-213ENST00000487989 MIR22HGQ0VDD5 57 aa5.17□□□□□ -1.58
PFKFB3-213ENST00000487989 V9GYY9 64 aa5.17□□□□□ -1.58
PFKFB3-213ENST00000487989 Q1T7F1 81 aa5.15□□□□□ -1.59
PFKFB3-213ENST00000487989 LCE3AQ5TA76 89 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms