RNA–Protein interactions for RNA: ENST00000487620.1

ZNF3-215, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 2,660 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-215ENST00000487620 FAT3Q8TDW7 4589 aa5.07□□□□□ -1.6
ZNF3-215ENST00000487620 LRP1Q07954 4544 aaKnown RBP5.07□□□□□ -1.6
ZNF3-215ENST00000487620 A0A0D9SG42 100 aa5.05□□□□□ -1.6
ZNF3-215ENST00000487620 H3BS24 57 aa5.04□□□□□ -1.6
ZNF3-215ENST00000487620 KRTAP10-6P60371 365 aaPredicted RBP5.03□□□□□ -1.6
ZNF3-215ENST00000487620 KRTAP3-3Q9BYR6 98 aa5.03□□□□□ -1.6
ZNF3-215ENST00000487620 TNXBP22105 4242 aa5.03□□□□□ -1.6
ZNF3-215ENST00000487620 ROMO1P60602 79 aa5.02□□□□□ -1.61
ZNF3-215ENST00000487620 RPL37P61927 97 aaKnown RBP5.02□□□□□ -1.61
ZNF3-215ENST00000487620 KRTAP13-4Q3LI77 160 aa5.02□□□□□ -1.61
ZNF3-215ENST00000487620 MYCBP2O75592 4640 aa5.02□□□□□ -1.61
ZNF3-215ENST00000487620 RYR2Q92736 4967 aa5.01□□□□□ -1.61
ZNF3-215ENST00000487620 KRTAP10-8P60410 259 aa5□□□□□ -1.61
ZNF3-215ENST00000487620 S4R3F8 94 aa5□□□□□ -1.61
ZNF3-215ENST00000487620 KRTAP3-2Q9BYR7 98 aa4.98□□□□□ -1.61
ZNF3-215ENST00000487620 XP32Q5T750 250 aa4.97□□□□□ -1.61
ZNF3-215ENST00000487620 P0C880 135 aa4.95□□□□□ -1.62
ZNF3-215ENST00000487620 EPPK1P58107 5090 aaKnown RBP4.95□□□□□ -1.62
ZNF3-215ENST00000487620 Q5VSD8 79 aa4.93□□□□□ -1.62
ZNF3-215ENST00000487620 TPRXLQ17RH7 258 aa4.91□□□□□ -1.62
ZNF3-215ENST00000487620 C10orf95Q9H7T3 257 aa4.9□□□□□ -1.63
ZNF3-215ENST00000487620 BIRC6Q9NR09 4857 aa4.9□□□□□ -1.63
ZNF3-215ENST00000487620 LPAP08519 4548 aa4.89□□□□□ -1.63
ZNF3-215ENST00000487620 KRTAP12-2P59991 146 aa4.88□□□□□ -1.63
ZNF3-215ENST00000487620 SPINT4Q6UDR6 99 aa4.87□□□□□ -1.63
ZNF3-215ENST00000487620 LRP2P98164 4655 aa4.82□□□□□ -1.64
ZNF3-215ENST00000487620 KRTAP12-1P59990 96 aa4.81□□□□□ -1.64
ZNF3-215ENST00000487620 RYR1P21817 5038 aa4.81□□□□□ -1.64
ZNF3-215ENST00000487620 KRTAP17-1Q9BYP8 105 aa4.8□□□□□ -1.64
ZNF3-215ENST00000487620 KIAA1109Q2LD37 5005 aa4.78□□□□□ -1.64
ZNF3-215ENST00000487620 MT1HL1P0DM35 61 aa4.78□□□□□ -1.64
ZNF3-215ENST00000487620 M0QZ58 72 aa4.75□□□□□ -1.65
ZNF3-215ENST00000487620 HERC2O95714 4834 aa4.74□□□□□ -1.65
ZNF3-215ENST00000487620 KRTAP15-1Q3LI76 137 aa4.71□□□□□ -1.66
ZNF3-215ENST00000487620 ABCA13Q86UQ4 5058 aa4.7□□□□□ -1.66
ZNF3-215ENST00000487620 NDUFAF8A1L188 74 aa4.68□□□□□ -1.66
ZNF3-215ENST00000487620 R4GN34 69 aa4.67□□□□□ -1.66
ZNF3-215ENST00000487620 KRTAP4-5Q9BYR2 181 aa4.66□□□□□ -1.66
ZNF3-215ENST00000487620 PCLOQ9Y6V0 5065 aa4.65□□□□□ -1.66
ZNF3-215ENST00000487620 LORP23490 312 aaPredicted RBP4.59□□□□□ -1.68
ZNF3-215ENST00000487620 MUC17Q685J3 4493 aa4.58□□□□□ -1.68
ZNF3-215ENST00000487620 SEC61BP60468 96 aaKnown RBP4.54□□□□□ -1.68
ZNF3-215ENST00000487620 KRTAP4-1Q9BYQ7 146 aa4.5□□□□□ -1.69
ZNF3-215ENST00000487620 PLAC4Q8WY50 150 aa4.48□□□□□ -1.69
ZNF3-215ENST00000487620 CAMK2N1Q7Z7J9 78 aa4.46□□□□□ -1.7
ZNF3-215ENST00000487620 MUC2Q02817 5179 aa4.45□□□□□ -1.7
ZNF3-215ENST00000487620 HERC1Q15751 4861 aa4.42□□□□□ -1.7
ZNF3-215ENST00000487620 J3QL48 77 aa4.42□□□□□ -1.7
ZNF3-215ENST00000487620 KRTAP19-2Q3LHN2 52 aa4.39□□□□□ -1.71
ZNF3-215ENST00000487620 PP632Q6XCG6 107 aa4.37□□□□□ -1.71
ZNF3-215ENST00000487620 FLGP20930 4061 aaPredicted RBP4.33□□□□□ -1.72
ZNF3-215ENST00000487620 LUZP6Q538Z0 58 aa4.31□□□□□ -1.72
ZNF3-215ENST00000487620 TNP1P09430 55 aa4.27□□□□□ -1.73
ZNF3-215ENST00000487620 HMCN2Q8NDA2 5059 aa4.22□□□□□ -1.73
ZNF3-215ENST00000487620 FAT4Q6V0I7 4981 aa4.21□□□□□ -1.74
ZNF3-215ENST00000487620 UBR4Q5T4S7 5183 aa4.16□□□□□ -1.74
ZNF3-215ENST00000487620 KRTAP23-1A1A580 65 aa4.16□□□□□ -1.74
ZNF3-215ENST00000487620 A0A0A0MQY5 61 aa4.15□□□□□ -1.74
ZNF3-215ENST00000487620 SPRR5A0A1B0GTR4 108 aa4.1□□□□□ -1.75
ZNF3-215ENST00000487620 M0R2T5 61 aa4.1□□□□□ -1.75
ZNF3-215ENST00000487620 LCE2CQ5TA81 110 aa4.1□□□□□ -1.75
ZNF3-215ENST00000487620 SPRR2GQ9BYE4 73 aa4.09□□□□□ -1.75
ZNF3-215ENST00000487620 KRTAP19-1Q8IUB9 90 aa4.08□□□□□ -1.76
ZNF3-215ENST00000487620 RNF213Q63HN8 5207 aa4.06□□□□□ -1.76
ZNF3-215ENST00000487620 LCE3AQ5TA76 89 aa4.04□□□□□ -1.76
ZNF3-215ENST00000487620 KRTAP10-10P60014 251 aa4□□□□□ -1.77
ZNF3-215ENST00000487620 MT1HP80294 61 aa3.99□□□□□ -1.77
ZNF3-215ENST00000487620 MT1FP04733 61 aa3.98□□□□□ -1.77
ZNF3-215ENST00000487620 MT2AP02795 61 aa3.96□□□□□ -1.78
ZNF3-215ENST00000487620 KRTAP9-8Q9BYQ0 159 aa3.91□□□□□ -1.78
ZNF3-215ENST00000487620 KRTAP8-1Q8IUC2 63 aa3.89□□□□□ -1.79
ZNF3-215ENST00000487620 KRTAP19-8Q3LI54 63 aa3.88□□□□□ -1.79
ZNF3-215ENST00000487620 KRTAP10-5P60370 271 aa3.87□□□□□ -1.79
ZNF3-215ENST00000487620 MT1XP80297 61 aa3.86□□□□□ -1.79
ZNF3-215ENST00000487620 MT1BP07438 61 aa3.85□□□□□ -1.79
ZNF3-215ENST00000487620 LCE2AQ5TA79 106 aaPredicted RBP3.85□□□□□ -1.79
ZNF3-215ENST00000487620 KRTAP10-12P60413 245 aa3.84□□□□□ -1.8
ZNF3-215ENST00000487620 KRTAP12-3P60328 96 aa3.83□□□□□ -1.8
ZNF3-215ENST00000487620 KRTAP9-2Q9BYQ4 174 aa3.81□□□□□ -1.8
ZNF3-215ENST00000487620 KRTAP10-7P60409 375 aaPredicted RBP3.79□□□□□ -1.8
ZNF3-215ENST00000487620 KRTAP9-3Q9BYQ3 159 aa3.73□□□□□ -1.81
ZNF3-215ENST00000487620 PRO2289Q9P1D8 64 aa3.73□□□□□ -1.81
ZNF3-215ENST00000487620 KRTAP9-6A0A140TA67 174 aa3.7□□□□□ -1.82
ZNF3-215ENST00000487620 INE1O15225 51 aa3.7□□□□□ -1.82
ZNF3-215ENST00000487620 KMT2DO14686 5537 aa3.68□□□□□ -1.82
ZNF3-215ENST00000487620 USH2AO75445 5202 aa3.68□□□□□ -1.82
ZNF3-215ENST00000487620 LCE2DQ5TA82 110 aaPredicted RBP3.66□□□□□ -1.82
ZNF3-215ENST00000487620 KRTAP19-5Q3LI72 72 aa3.65□□□□□ -1.83
ZNF3-215ENST00000487620 LCE3CQ5T5A8 94 aa3.61□□□□□ -1.83
ZNF3-215ENST00000487620 LCE2BO14633 110 aa3.59□□□□□ -1.83
ZNF3-215ENST00000487620 CRCT1Q9UGL9 99 aa3.59□□□□□ -1.83
ZNF3-215ENST00000487620 KRTAP4-8A0A0G2JLE6 195 aa3.55□□□□□ -1.84
ZNF3-215ENST00000487620 KRTAP4-8Q9BYQ9 185 aa3.55□□□□□ -1.84
ZNF3-215ENST00000487620 FSIP2Q5CZC0 6907 aa3.54□□□□□ -1.84
ZNF3-215ENST00000487620 KRTAP9-6A8MVA2 160 aa3.5□□□□□ -1.85
ZNF3-215ENST00000487620 KRTAP4-7Q9BYR0 210 aa3.46□□□□□ -1.86
ZNF3-215ENST00000487620 KRTAP19-7Q3SYF9 63 aa3.43□□□□□ -1.86
ZNF3-215ENST00000487620 KRTAP2-3P0C7H8 128 aa3.37□□□□□ -1.87
ZNF3-215ENST00000487620 KRTAP2-4Q9BYR9 128 aa3.37□□□□□ -1.87
ZNF3-215ENST00000487620 KRTAP2-1Q9BYU5 128 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms