RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 NDUFB1O75438 58 aa5.99□□□□□ -1.45
TRIM56-204ENST00000487252 KRTAP10-10P60014 251 aa5.99□□□□□ -1.45
TRIM56-204ENST00000487252 SERP1Q9Y6X1 66 aa5.99□□□□□ -1.45
TRIM56-204ENST00000487252 HRCT1Q6UXD1 115 aa5.98□□□□□ -1.45
TRIM56-204ENST00000487252 H3BPC8 53 aa5.97□□□□□ -1.45
TRIM56-204ENST00000487252 A0A1B0GVX0 72 aa5.96□□□□□ -1.46
TRIM56-204ENST00000487252 KRTAP2-3P0C7H8 128 aa5.96□□□□□ -1.46
TRIM56-204ENST00000487252 KRTAP5-3Q6L8H2 238 aa5.96□□□□□ -1.46
TRIM56-204ENST00000487252 KRTAP2-4Q9BYR9 128 aa5.96□□□□□ -1.46
TRIM56-204ENST00000487252 C8orf17Q9NRJ1 99 aa5.96□□□□□ -1.46
TRIM56-204ENST00000487252 Q5XG85 94 aa5.95□□□□□ -1.46
TRIM56-204ENST00000487252 KMT2DO14686 5537 aa5.95□□□□□ -1.46
TRIM56-204ENST00000487252 hDV103S1A0JD37 113 aa5.94□□□□□ -1.46
TRIM56-204ENST00000487252 MP68P56378 58 aa5.93□□□□□ -1.46
TRIM56-204ENST00000487252 TP53AIP1Q9HCN2 124 aa5.92□□□□□ -1.46
TRIM56-204ENST00000487252 H0Y9P7 68 aa5.91□□□□□ -1.46
TRIM56-204ENST00000487252 TRAV22A0A0B4J277 110 aa5.9□□□□□ -1.46
TRIM56-204ENST00000487252 LCE5AQ5TCM9 118 aa5.9□□□□□ -1.46
TRIM56-204ENST00000487252 IGHV6-1A0A0B4J1U7 121 aa5.89□□□□□ -1.47
TRIM56-204ENST00000487252 CYP4F30PQ9H0H9 118 aa5.89□□□□□ -1.47
TRIM56-204ENST00000487252 C8orf87E5RJ46 101 aa5.88□□□□□ -1.47
TRIM56-204ENST00000487252 NOTCH2NLQ7Z3S9 236 aa5.88□□□□□ -1.47
TRIM56-204ENST00000487252 LINC00208Q96KT6 92 aa5.88□□□□□ -1.47
TRIM56-204ENST00000487252 MRPL34Q9BQ48 92 aaKnown RBP5.88□□□□□ -1.47
TRIM56-204ENST00000487252 KRTAP5-9P26371 169 aa5.87□□□□□ -1.47
TRIM56-204ENST00000487252 LIMD2Q9BT23 127 aa5.87□□□□□ -1.47
TRIM56-204ENST00000487252 MDN1Q9NU22 5596 aa5.87□□□□□ -1.47
TRIM56-204ENST00000487252 SMIM26A0A096LP01 95 aa5.86□□□□□ -1.47
TRIM56-204ENST00000487252 SPANXA2-OT1Q8N9U9 137 aa5.86□□□□□ -1.47
TRIM56-204ENST00000487252 C1orf64Q8NEQ6 169 aa5.86□□□□□ -1.47
TRIM56-204ENST00000487252 C1orf195Q5TG92 126 aa5.85□□□□□ -1.47
TRIM56-204ENST00000487252 NDUFS5O43920 106 aa5.78□□□□□ -1.48
TRIM56-204ENST00000487252 LINC00313P59037 77 aa5.78□□□□□ -1.48
TRIM56-204ENST00000487252 Q8N9P0 234 aaPredicted RBP5.78□□□□□ -1.48
TRIM56-204ENST00000487252 KRTAP16-1A8MUX0 517 aa5.77□□□□□ -1.49
TRIM56-204ENST00000487252 C4orf26Q17RF5 130 aa5.76□□□□□ -1.49
TRIM56-204ENST00000487252 Q5W150 140 aa5.76□□□□□ -1.49
TRIM56-204ENST00000487252 C20orf166-AS1Q96NR2 134 aa5.76□□□□□ -1.49
TRIM56-204ENST00000487252 GPR98Q8WXG9 6306 aa5.75□□□□□ -1.49
TRIM56-204ENST00000487252 LOC101927531A0A1B0GV80 90 aa5.75□□□□□ -1.49
TRIM56-204ENST00000487252 ATP11AUNQ6ZP68 121 aa5.74□□□□□ -1.49
TRIM56-204ENST00000487252 Q75L30 129 aa5.72□□□□□ -1.49
TRIM56-204ENST00000487252 KRTAP2-2Q9BYT5 123 aa5.72□□□□□ -1.49
TRIM56-204ENST00000487252 KRTAP2-1Q9BYU5 128 aa5.72□□□□□ -1.49
TRIM56-204ENST00000487252 Q1T7F1 81 aa5.7□□□□□ -1.5
TRIM56-204ENST00000487252 SVIPQ8NHG7 77 aa5.69□□□□□ -1.5
TRIM56-204ENST00000487252 IGKV2-30P06310 120 aa5.67□□□□□ -1.5
TRIM56-204ENST00000487252 COA5Q86WW8 74 aa5.66□□□□□ -1.5
TRIM56-204ENST00000487252 MPLKIPQ8TAP9 179 aa5.65□□□□□ -1.5
TRIM56-204ENST00000487252 V9GYY9 64 aa5.64□□□□□ -1.51
TRIM56-204ENST00000487252 HRES1P13985 223 aa5.62□□□□□ -1.51
TRIM56-204ENST00000487252 KRTAP19-4Q3LI73 84 aa5.62□□□□□ -1.51
TRIM56-204ENST00000487252 DMAC1Q96GE9 116 aa5.6□□□□□ -1.51
TRIM56-204ENST00000487252 A6NN06 94 aa5.59□□□□□ -1.51
TRIM56-204ENST00000487252 A8MUU9 505 aa5.58□□□□□ -1.52
TRIM56-204ENST00000487252 ACYP2P14621 99 aa5.56□□□□□ -1.52
TRIM56-204ENST00000487252 LINC01558Q9Y6Z2 57 aa5.55□□□□□ -1.52
TRIM56-204ENST00000487252 A8MUN3 132 aa5.53□□□□□ -1.52
TRIM56-204ENST00000487252 Q5VV11 94 aa5.53□□□□□ -1.52
TRIM56-204ENST00000487252 PRO0628Q9UI54 55 aa5.53□□□□□ -1.52
TRIM56-204ENST00000487252 IGKV2D-30A0A075B6S6 120 aa5.52□□□□□ -1.53
TRIM56-204ENST00000487252 PSPHP1O15172 72 aa5.52□□□□□ -1.53
TRIM56-204ENST00000487252 SPRR2EP22531 72 aa5.52□□□□□ -1.53
TRIM56-204ENST00000487252 SPRR2BP35325 72 aa5.52□□□□□ -1.53
TRIM56-204ENST00000487252 SPRR2AP35326 72 aa5.52□□□□□ -1.53
TRIM56-204ENST00000487252 C7orf65Q6ZTY9 151 aa5.51□□□□□ -1.53
TRIM56-204ENST00000487252 RBM12B-AS1Q9P1G2 102 aa5.51□□□□□ -1.53
TRIM56-204ENST00000487252 PRR15LQ9BU68 103 aa5.48□□□□□ -1.53
TRIM56-204ENST00000487252 BRK1Q8WUW1 75 aa5.46□□□□□ -1.54
TRIM56-204ENST00000487252 KRTAP10-5P60370 271 aa5.44□□□□□ -1.54
TRIM56-204ENST00000487252 CHKB-CPT1BH3BT56 60 aa5.43□□□□□ -1.54
TRIM56-204ENST00000487252 SPRR2FQ96RM1 72 aa5.42□□□□□ -1.54
TRIM56-204ENST00000487252 MT1BP07438 61 aa5.41□□□□□ -1.54
TRIM56-204ENST00000487252 LCE1AQ5T7P2 110 aa5.41□□□□□ -1.54
TRIM56-204ENST00000487252 SPINK7P58062 85 aa5.39□□□□□ -1.55
TRIM56-204ENST00000487252 KRTAP3-1Q9BYR8 98 aa5.37□□□□□ -1.55
TRIM56-204ENST00000487252 SPRR2DP22532 72 aa5.35□□□□□ -1.55
TRIM56-204ENST00000487252 LCA10Q71F78 164 aa5.35□□□□□ -1.55
TRIM56-204ENST00000487252 A6NED7 52 aa5.34□□□□□ -1.55
TRIM56-204ENST00000487252 CDC42SE1Q9NRR8 79 aa5.34□□□□□ -1.55
TRIM56-204ENST00000487252 A8MU10 97 aa5.32□□□□□ -1.56
TRIM56-204ENST00000487252 A0A1B0GU69 56 aa5.31□□□□□ -1.56
TRIM56-204ENST00000487252 SPTSSBQ8NFR3 76 aa5.31□□□□□ -1.56
TRIM56-204ENST00000487252 KRTAP19-8Q3LI54 63 aa5.28□□□□□ -1.56
TRIM56-204ENST00000487252 SPATA8Q6RVD6 105 aa5.25□□□□□ -1.57
TRIM56-204ENST00000487252 DSTQ03001 7570 aaKnown RBP5.22□□□□□ -1.57
TRIM56-204ENST00000487252 UQCR11O14957 56 aa5.21□□□□□ -1.58
TRIM56-204ENST00000487252 SEC61GP60059 68 aa5.19□□□□□ -1.58
TRIM56-204ENST00000487252 PMAIP1Q13794 54 aa5.18□□□□□ -1.58
TRIM56-204ENST00000487252 SPRR2GQ9BYE4 73 aa5.18□□□□□ -1.58
TRIM56-204ENST00000487252 MIR22HGQ0VDD5 57 aa5.17□□□□□ -1.58
TRIM56-204ENST00000487252 KRTAP8-1Q8IUC2 63 aa5.13□□□□□ -1.59
TRIM56-204ENST00000487252 H1FX-AS1Q4G0G2 97 aa5.11□□□□□ -1.59
TRIM56-204ENST00000487252 S4R3F8 94 aa5.11□□□□□ -1.59
TRIM56-204ENST00000487252 A0A1B0GU33 70 aa5.1□□□□□ -1.59
TRIM56-204ENST00000487252 H0YAA0 97 aa5.08□□□□□ -1.6
TRIM56-204ENST00000487252 KTN1-AS1Q86SY8 53 aa5.07□□□□□ -1.6
TRIM56-204ENST00000487252 KRTAP5-10Q6L8G5 202 aa5.04□□□□□ -1.6
TRIM56-204ENST00000487252 CSAG1Q6PB30 78 aa4.97□□□□□ -1.61
TRIM56-204ENST00000487252 AHNAK2Q8IVF2 5795 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms