RNA–Protein interactions for RNA: ENST00000486837.1

LMBR1-218, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 576 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-218ENST00000486837 TLN2Q9Y4G6 2542 aa1.5□□□□□ -2.17
LMBR1-218ENST00000486837 COL7A1Q02388 2944 aa1.5□□□□□ -2.17
LMBR1-218ENST00000486837 APOBP04114 4563 aaKnown RBP1.5□□□□□ -2.17
LMBR1-218ENST00000486837 C9orf92A6NGG3 77 aa1.5□□□□□ -2.17
LMBR1-218ENST00000486837 BSNQ9UPA5 3926 aa1.5□□□□□ -2.17
LMBR1-218ENST00000486837 SMG1Q96Q15 3661 aaKnown RBP1.5□□□□□ -2.17
LMBR1-218ENST00000486837 ASPMQ8IZT6 3477 aa1.49□□□□□ -2.17
LMBR1-218ENST00000486837 TGP01266 2768 aa1.49□□□□□ -2.17
LMBR1-218ENST00000486837 LRRK2Q5S007 2527 aa1.48□□□□□ -2.17
LMBR1-218ENST00000486837 TENM4Q6N022 2769 aa1.48□□□□□ -2.17
LMBR1-218ENST00000486837 DOPEY1Q5JWR5 2465 aa1.48□□□□□ -2.17
LMBR1-218ENST00000486837 ZFYVE26Q68DK2 2539 aa1.48□□□□□ -2.17
LMBR1-218ENST00000486837 HRNRQ86YZ3 2850 aaPredicted RBP1.48□□□□□ -2.17
LMBR1-218ENST00000486837 HECTD1Q9ULT8 2610 aa1.48□□□□□ -2.17
LMBR1-218ENST00000486837 MTORP42345 2549 aa1.47□□□□□ -2.17
LMBR1-218ENST00000486837 CMYA5Q8N3K9 4069 aa1.47□□□□□ -2.17
LMBR1-218ENST00000486837 ITPR3Q14573 2671 aa1.47□□□□□ -2.17
LMBR1-218ENST00000486837 ABCA12Q86UK0 2595 aa1.47□□□□□ -2.17
LMBR1-218ENST00000486837 CENPEQ02224 2701 aa1.47□□□□□ -2.17
LMBR1-218ENST00000486837 ACANP16112 2415 aa1.47□□□□□ -2.17
LMBR1-218ENST00000486837 DNAH6Q9C0G6 4158 aa1.47□□□□□ -2.17
LMBR1-218ENST00000486837 CHD8Q9HCK8 2581 aa1.47□□□□□ -2.17
LMBR1-218ENST00000486837 MYO9AB2RTY4 2548 aa1.46□□□□□ -2.18
LMBR1-218ENST00000486837 TRRAPQ9Y4A5 3859 aa1.45□□□□□ -2.18
LMBR1-218ENST00000486837 PDZD2O15018 2839 aa1.45□□□□□ -2.18
LMBR1-218ENST00000486837 KRTAP10-4P60372 401 aaPredicted RBP1.45□□□□□ -2.18
LMBR1-218ENST00000486837 UTP20O75691 2785 aaKnown RBP1.45□□□□□ -2.18
LMBR1-218ENST00000486837 ANK2Q01484 3957 aa1.45□□□□□ -2.18
LMBR1-218ENST00000486837 FAT3Q8TDW7 4589 aa1.45□□□□□ -2.18
LMBR1-218ENST00000486837 USP9YO00507 2555 aaPredicted RBP1.45□□□□□ -2.18
LMBR1-218ENST00000486837 ADGRG4Q8IZF6 3080 aa1.44□□□□□ -2.18
LMBR1-218ENST00000486837 NBEAL2Q6ZNJ1 2754 aa1.44□□□□□ -2.18
LMBR1-218ENST00000486837 UNC79Q9P2D8 2635 aa1.44□□□□□ -2.18
LMBR1-218ENST00000486837 DNAH3Q8TD57 4116 aa1.44□□□□□ -2.18
LMBR1-218ENST00000486837 CFAP46Q8IYW2 2715 aa1.44□□□□□ -2.18
LMBR1-218ENST00000486837 PRKDCP78527 4128 aaKnown RBP1.43□□□□□ -2.18
LMBR1-218ENST00000486837 CSMD3Q7Z407 3707 aa1.43□□□□□ -2.18
LMBR1-218ENST00000486837 PIEZO1Q92508 2521 aa1.43□□□□□ -2.18
LMBR1-218ENST00000486837 STAB2Q8WWQ8 2551 aa1.43□□□□□ -2.18
LMBR1-218ENST00000486837 KRTAP2-3P0C7H8 128 aa1.43□□□□□ -2.18
LMBR1-218ENST00000486837 KRTAP2-4Q9BYR9 128 aa1.43□□□□□ -2.18
LMBR1-218ENST00000486837 KRTAP2-1Q9BYU5 128 aa1.43□□□□□ -2.18
LMBR1-218ENST00000486837 MYO15AQ9UKN7 3530 aa1.43□□□□□ -2.18
LMBR1-218ENST00000486837 PKD1P98161 4303 aa1.43□□□□□ -2.18
LMBR1-218ENST00000486837 CACNA1AO00555 2505 aa1.42□□□□□ -2.18
LMBR1-218ENST00000486837 FBN3Q75N90 2809 aa1.42□□□□□ -2.18
LMBR1-218ENST00000486837 KRTAP8-1Q8IUC2 63 aa1.42□□□□□ -2.18
LMBR1-218ENST00000486837 EPG5Q9HCE0 2579 aa1.42□□□□□ -2.18
LMBR1-218ENST00000486837 MUC3AQ02505 3323 aa1.41□□□□□ -2.18
LMBR1-218ENST00000486837 KRTAP4-1Q9BYQ7 146 aa1.41□□□□□ -2.18
LMBR1-218ENST00000486837 GCN1Q92616 2671 aaKnown RBP1.41□□□□□ -2.18
LMBR1-218ENST00000486837 HSPG2P98160 4391 aa1.4□□□□□ -2.19
LMBR1-218ENST00000486837 USP24Q9UPU5 2620 aa1.39□□□□□ -2.19
LMBR1-218ENST00000486837 NBEAL1Q6ZS30 2694 aa1.39□□□□□ -2.19
LMBR1-218ENST00000486837 CSMD2Q7Z408 3487 aa1.39□□□□□ -2.19
LMBR1-218ENST00000486837 DNAH5Q8TE73 4624 aa1.39□□□□□ -2.19
LMBR1-218ENST00000486837 LRP1Q07954 4544 aaKnown RBP1.38□□□□□ -2.19
LMBR1-218ENST00000486837 LYSTQ99698 3801 aa1.38□□□□□ -2.19
LMBR1-218ENST00000486837 MXRA5Q9NR99 2828 aa1.37□□□□□ -2.19
LMBR1-218ENST00000486837 FAT2Q9NYQ8 4349 aa1.37□□□□□ -2.19
LMBR1-218ENST00000486837 ITPR2Q14571 2701 aa1.37□□□□□ -2.19
LMBR1-218ENST00000486837 FCGBPQ9Y6R7 5405 aaPredicted RBP1.36□□□□□ -2.19
LMBR1-218ENST00000486837 DNAH7Q8WXX0 4024 aa1.36□□□□□ -2.19
LMBR1-218ENST00000486837 DYNC1H1Q14204 4646 aaKnown RBP1.36□□□□□ -2.19
LMBR1-218ENST00000486837 EYSQ5T1H1 3165 aa1.36□□□□□ -2.19
LMBR1-218ENST00000486837 VPS13CQ709C8 3753 aa1.36□□□□□ -2.19
LMBR1-218ENST00000486837 PKHD1L1Q86WI1 4243 aa1.36□□□□□ -2.19
LMBR1-218ENST00000486837 PLECQ15149 4684 aaKnown RBP1.36□□□□□ -2.19
LMBR1-218ENST00000486837 HIVEP1P15822 2718 aa1.36□□□□□ -2.19
LMBR1-218ENST00000486837 TENM1Q9UKZ4 2725 aa1.36□□□□□ -2.19
LMBR1-218ENST00000486837 KMT2AQ03164 3969 aa1.36□□□□□ -2.19
LMBR1-218ENST00000486837 ZNF292O60281 2723 aa1.35□□□□□ -2.19
LMBR1-218ENST00000486837 HMCN1Q96RW7 5635 aa1.35□□□□□ -2.19
LMBR1-218ENST00000486837 STARD9Q9P2P6 4700 aa1.35□□□□□ -2.19
LMBR1-218ENST00000486837 BDP1A6H8Y1 2624 aa1.35□□□□□ -2.19
LMBR1-218ENST00000486837 ZANQ9Y493 2812 aa1.34□□□□□ -2.19
LMBR1-218ENST00000486837 CUBNO60494 3623 aa1.34□□□□□ -2.19
LMBR1-218ENST00000486837 M0R2T5 61 aa1.34□□□□□ -2.19
LMBR1-218ENST00000486837 FBN2P35556 2912 aa1.34□□□□□ -2.2
LMBR1-218ENST00000486837 FASNP49327 2511 aaKnown RBP1.34□□□□□ -2.2
LMBR1-218ENST00000486837 FLGP20930 4061 aaPredicted RBP1.34□□□□□ -2.2
LMBR1-218ENST00000486837 PKD1L1Q8TDX9 2849 aa1.33□□□□□ -2.2
LMBR1-218ENST00000486837 SVEP1Q4LDE5 3571 aa1.33□□□□□ -2.2
LMBR1-218ENST00000486837 POLQO75417 2590 aa1.33□□□□□ -2.2
LMBR1-218ENST00000486837 TEP1Q99973 2627 aaKnown RBP1.33□□□□□ -2.2
LMBR1-218ENST00000486837 HECTD4Q9Y4D8 3996 aa1.32□□□□□ -2.2
LMBR1-218ENST00000486837 VPS13BQ7Z7G8 4022 aa1.32□□□□□ -2.2
LMBR1-218ENST00000486837 NOTCH1P46531 2555 aa1.32□□□□□ -2.2
LMBR1-218ENST00000486837 CEP295Q9C0D2 2601 aa1.32□□□□□ -2.2
LMBR1-218ENST00000486837 ZNF469Q96JG9 3925 aaPredicted RBP1.32□□□□□ -2.2
LMBR1-218ENST00000486837 ATRQ13535 2644 aa1.31□□□□□ -2.2
LMBR1-218ENST00000486837 SMR3BP02814 79 aaPredicted RBP1.3□□□□□ -2.2
LMBR1-218ENST00000486837 FLNCQ14315 2725 aa1.29□□□□□ -2.2
LMBR1-218ENST00000486837 STAB1Q9NY15 2570 aa1.28□□□□□ -2.2
LMBR1-218ENST00000486837 HERC1Q15751 4861 aa1.28□□□□□ -2.21
LMBR1-218ENST00000486837 LRP1BQ9NZR2 4599 aa1.27□□□□□ -2.21
LMBR1-218ENST00000486837 ANKRD11Q6UB99 2663 aaPredicted RBP1.27□□□□□ -2.21
LMBR1-218ENST00000486837 TNXBP22105 4242 aa1.27□□□□□ -2.21
LMBR1-218ENST00000486837 MYO18BQ8IUG5 2567 aa1.26□□□□□ -2.21
LMBR1-218ENST00000486837 FLNAP21333 2647 aaKnown RBP1.25□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms