RNA–Protein interactions for RNA: ENST00000486715.5

GFM1-210, Transcript of G elongation factor mitochondrial 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GFM1, Length 3,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFM1-210ENST00000486715 S4R3F8 94 aa5.29□□□□□ -1.56
GFM1-210ENST00000486715 HERC2O95714 4834 aa5.28□□□□□ -1.56
GFM1-210ENST00000486715 KRTAP15-1Q3LI76 137 aa5.28□□□□□ -1.56
GFM1-210ENST00000486715 DYNC1H1Q14204 4646 aaKnown RBP5.26□□□□□ -1.57
GFM1-210ENST00000486715 KRTAP12-2P59991 146 aa5.26□□□□□ -1.57
GFM1-210ENST00000486715 KRTAP10-6P60371 365 aaPredicted RBP5.25□□□□□ -1.57
GFM1-210ENST00000486715 FAT2Q9NYQ8 4349 aa5.25□□□□□ -1.57
GFM1-210ENST00000486715 VPS13BQ7Z7G8 4022 aa5.23□□□□□ -1.57
GFM1-210ENST00000486715 LUZP6Q538Z0 58 aa5.22□□□□□ -1.57
GFM1-210ENST00000486715 A0A1B0GVY2 172 aa5.21□□□□□ -1.58
GFM1-210ENST00000486715 PKD1P98161 4303 aa5.2□□□□□ -1.58
GFM1-210ENST00000486715 DNAH5Q8TE73 4624 aa5.19□□□□□ -1.58
GFM1-210ENST00000486715 KRTAP3-2Q9BYR7 98 aa5.15□□□□□ -1.58
GFM1-210ENST00000486715 KRTAP3-3Q9BYR6 98 aa5.15□□□□□ -1.59
GFM1-210ENST00000486715 KRTAP10-8P60410 259 aa5.14□□□□□ -1.59
GFM1-210ENST00000486715 J3QL48 77 aa5.14□□□□□ -1.59
GFM1-210ENST00000486715 MYCBP2O75592 4640 aa5.13□□□□□ -1.59
GFM1-210ENST00000486715 FAT1Q14517 4588 aa5.13□□□□□ -1.59
GFM1-210ENST00000486715 KRTAP12-1P59990 96 aa5.11□□□□□ -1.59
GFM1-210ENST00000486715 KRTAP17-1Q9BYP8 105 aa5.11□□□□□ -1.59
GFM1-210ENST00000486715 RYR1P21817 5038 aa5.07□□□□□ -1.6
GFM1-210ENST00000486715 M0QZ58 72 aa5.06□□□□□ -1.6
GFM1-210ENST00000486715 PLAC4Q8WY50 150 aa5.06□□□□□ -1.6
GFM1-210ENST00000486715 RPS29P62273 56 aaKnown RBP5.05□□□□□ -1.6
GFM1-210ENST00000486715 HSPG2P98160 4391 aa5.04□□□□□ -1.6
GFM1-210ENST00000486715 PKHD1P08F94 4074 aa5.04□□□□□ -1.6
GFM1-210ENST00000486715 APOBP04114 4563 aaKnown RBP5.02□□□□□ -1.61
GFM1-210ENST00000486715 PKHD1L1Q86WI1 4243 aa5.01□□□□□ -1.61
GFM1-210ENST00000486715 XP32Q5T750 250 aa5.01□□□□□ -1.61
GFM1-210ENST00000486715 PCLOQ9Y6V0 5065 aa5.01□□□□□ -1.61
GFM1-210ENST00000486715 R4GN34 69 aa5□□□□□ -1.61
GFM1-210ENST00000486715 KIAA1109Q2LD37 5005 aa4.96□□□□□ -1.61
GFM1-210ENST00000486715 LCE2DQ5TA82 110 aaPredicted RBP4.96□□□□□ -1.62
GFM1-210ENST00000486715 ABCA13Q86UQ4 5058 aa4.94□□□□□ -1.62
GFM1-210ENST00000486715 LRP1Q07954 4544 aaKnown RBP4.93□□□□□ -1.62
GFM1-210ENST00000486715 CAMK2N1Q7Z7J9 78 aa4.9□□□□□ -1.63
GFM1-210ENST00000486715 KRTAP4-5Q9BYR2 181 aa4.87□□□□□ -1.63
GFM1-210ENST00000486715 FAT3Q8TDW7 4589 aa4.86□□□□□ -1.63
GFM1-210ENST00000486715 LPAP08519 4548 aa4.8□□□□□ -1.64
GFM1-210ENST00000486715 LORP23490 312 aaPredicted RBP4.79□□□□□ -1.64
GFM1-210ENST00000486715 KRTAP10-4P60372 401 aaPredicted RBP4.78□□□□□ -1.64
GFM1-210ENST00000486715 Q5VSD8 79 aa4.77□□□□□ -1.65
GFM1-210ENST00000486715 LRP2P98164 4655 aa4.76□□□□□ -1.65
GFM1-210ENST00000486715 TNXBP22105 4242 aa4.67□□□□□ -1.66
GFM1-210ENST00000486715 HERC1Q15751 4861 aa4.63□□□□□ -1.67
GFM1-210ENST00000486715 HMCN2Q8NDA2 5059 aa4.63□□□□□ -1.67
GFM1-210ENST00000486715 PP632Q6XCG6 107 aa4.61□□□□□ -1.67
GFM1-210ENST00000486715 MT1HL1P0DM35 61 aa4.58□□□□□ -1.68
GFM1-210ENST00000486715 TNP1P09430 55 aa4.57□□□□□ -1.68
GFM1-210ENST00000486715 SEC61BP60468 96 aaKnown RBP4.54□□□□□ -1.68
GFM1-210ENST00000486715 MUC17Q685J3 4493 aa4.42□□□□□ -1.7
GFM1-210ENST00000486715 MUC2Q02817 5179 aa4.41□□□□□ -1.7
GFM1-210ENST00000486715 KRTAP4-1Q9BYQ7 146 aa4.39□□□□□ -1.71
GFM1-210ENST00000486715 PRO2289Q9P1D8 64 aa4.36□□□□□ -1.71
GFM1-210ENST00000486715 UBR4Q5T4S7 5183 aa4.33□□□□□ -1.72
GFM1-210ENST00000486715 LCE2BO14633 110 aa4.32□□□□□ -1.72
GFM1-210ENST00000486715 RNF213Q63HN8 5207 aa4.29□□□□□ -1.72
GFM1-210ENST00000486715 LCE3AQ5TA76 89 aa4.28□□□□□ -1.72
GFM1-210ENST00000486715 M0R2T5 61 aa4.27□□□□□ -1.73
GFM1-210ENST00000486715 SPRR5A0A1B0GTR4 108 aa4.26□□□□□ -1.73
GFM1-210ENST00000486715 LCE2CQ5TA81 110 aa4.26□□□□□ -1.73
GFM1-210ENST00000486715 LCE2AQ5TA79 106 aaPredicted RBP4.24□□□□□ -1.73
GFM1-210ENST00000486715 FAT4Q6V0I7 4981 aa4.17□□□□□ -1.74
GFM1-210ENST00000486715 INE1O15225 51 aa4.17□□□□□ -1.74
GFM1-210ENST00000486715 KRTAP23-1A1A580 65 aa4.11□□□□□ -1.75
GFM1-210ENST00000486715 KRTAP9-2Q9BYQ4 174 aa4.09□□□□□ -1.75
GFM1-210ENST00000486715 KRTAP10-10P60014 251 aa4.08□□□□□ -1.76
GFM1-210ENST00000486715 KRTAP19-2Q3LHN2 52 aa4.07□□□□□ -1.76
GFM1-210ENST00000486715 KRTAP12-3P60328 96 aa4.03□□□□□ -1.76
GFM1-210ENST00000486715 KRTAP9-6A0A140TA67 174 aa4.02□□□□□ -1.77
GFM1-210ENST00000486715 FLGP20930 4061 aaPredicted RBP4.01□□□□□ -1.77
GFM1-210ENST00000486715 KRTAP19-1Q8IUB9 90 aa3.98□□□□□ -1.77
GFM1-210ENST00000486715 KRTAP10-12P60413 245 aa3.95□□□□□ -1.78
GFM1-210ENST00000486715 KRTAP8-1Q8IUC2 63 aa3.93□□□□□ -1.78
GFM1-210ENST00000486715 SPRR2GQ9BYE4 73 aa3.92□□□□□ -1.78
GFM1-210ENST00000486715 MT1HP80294 61 aa3.88□□□□□ -1.79
GFM1-210ENST00000486715 CRCT1Q9UGL9 99 aa3.86□□□□□ -1.79
GFM1-210ENST00000486715 MT1FP04733 61 aa3.86□□□□□ -1.79
GFM1-210ENST00000486715 KMT2DO14686 5537 aa3.85□□□□□ -1.79
GFM1-210ENST00000486715 KRTAP10-7P60409 375 aaPredicted RBP3.85□□□□□ -1.79
GFM1-210ENST00000486715 MT2AP02795 61 aa3.81□□□□□ -1.8
GFM1-210ENST00000486715 KRTAP10-5P60370 271 aa3.8□□□□□ -1.8
GFM1-210ENST00000486715 MT1XP80297 61 aa3.79□□□□□ -1.8
GFM1-210ENST00000486715 KRTAP19-5Q3LI72 72 aa3.75□□□□□ -1.81
GFM1-210ENST00000486715 USH2AO75445 5202 aa3.73□□□□□ -1.81
GFM1-210ENST00000486715 LCE3CQ5T5A8 94 aa3.72□□□□□ -1.81
GFM1-210ENST00000486715 MT1BP07438 61 aa3.72□□□□□ -1.81
GFM1-210ENST00000486715 KRTAP4-7Q9BYR0 210 aa3.71□□□□□ -1.82
GFM1-210ENST00000486715 KRTAP9-8Q9BYQ0 159 aa3.7□□□□□ -1.82
GFM1-210ENST00000486715 KRTAP9-6A8MVA2 160 aa3.66□□□□□ -1.82
GFM1-210ENST00000486715 KRTAP4-8A0A0G2JLE6 195 aa3.66□□□□□ -1.82
GFM1-210ENST00000486715 KRTAP4-8Q9BYQ9 185 aa3.66□□□□□ -1.82
GFM1-210ENST00000486715 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.63□□□□□ -1.83
GFM1-210ENST00000486715 KRTAP19-8Q3LI54 63 aa3.63□□□□□ -1.83
GFM1-210ENST00000486715 KRTAP9-3Q9BYQ3 159 aa3.6□□□□□ -1.83
GFM1-210ENST00000486715 KRTAP9-7A8MTY7 169 aa3.57□□□□□ -1.84
GFM1-210ENST00000486715 KRTAP19-6Q3LI70 58 aa3.56□□□□□ -1.84
GFM1-210ENST00000486715 OBSCNQ5VST9 7968 aa3.54□□□□□ -1.84
GFM1-210ENST00000486715 SSPOA2VEC9 5147 aa3.53□□□□□ -1.84
GFM1-210ENST00000486715 SYNE1Q8NF91 8797 aaKnown RBP3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms