RNA–Protein interactions for RNA: ENST00000486506.5

MECP2-209, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5

Gene MECP2, Length 2,907 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-209ENST00000486506 HSPG2P98160 4391 aa4.39□□□□□ -1.71
MECP2-209ENST00000486506 RYR1P21817 5038 aa4.38□□□□□ -1.71
MECP2-209ENST00000486506 TPRXLQ17RH7 258 aa4.38□□□□□ -1.71
MECP2-209ENST00000486506 A0A1B0GU33 70 aa4.37□□□□□ -1.71
MECP2-209ENST00000486506 IGKV2-30P06310 120 aa4.37□□□□□ -1.71
MECP2-209ENST00000486506 KRTAP17-1Q9BYP8 105 aa4.34□□□□□ -1.71
MECP2-209ENST00000486506 LRP1Q07954 4544 aaKnown RBP4.34□□□□□ -1.71
MECP2-209ENST00000486506 KRTAP10-4P60372 401 aaPredicted RBP4.33□□□□□ -1.72
MECP2-209ENST00000486506 H1FX-AS1Q4G0G2 97 aa4.33□□□□□ -1.72
MECP2-209ENST00000486506 MYCBP2O75592 4640 aa4.33□□□□□ -1.72
MECP2-209ENST00000486506 IGKV2D-30A0A075B6S6 120 aa4.33□□□□□ -1.72
MECP2-209ENST00000486506 Q5VSD8 79 aa4.32□□□□□ -1.72
MECP2-209ENST00000486506 CAMK2N1Q7Z7J9 78 aa4.32□□□□□ -1.72
MECP2-209ENST00000486506 SPINK6Q6UWN8 80 aa4.3□□□□□ -1.72
MECP2-209ENST00000486506 KRTAP1-4P0C5Y4 121 aa4.3□□□□□ -1.72
MECP2-209ENST00000486506 HERC2O95714 4834 aa4.28□□□□□ -1.72
MECP2-209ENST00000486506 Q8N1X5 172 aa4.27□□□□□ -1.73
MECP2-209ENST00000486506 KRTAP13-2Q52LG2 175 aa4.26□□□□□ -1.73
MECP2-209ENST00000486506 SPINK1P00995 79 aa4.26□□□□□ -1.73
MECP2-209ENST00000486506 KRTAP4-5Q9BYR2 181 aa4.25□□□□□ -1.73
MECP2-209ENST00000486506 FAT3Q8TDW7 4589 aa4.25□□□□□ -1.73
MECP2-209ENST00000486506 TYMSOSQ8TAI1 123 aa4.24□□□□□ -1.73
MECP2-209ENST00000486506 COX6B2Q6YFQ2 88 aa4.23□□□□□ -1.73
MECP2-209ENST00000486506 PKHD1L1Q86WI1 4243 aa4.22□□□□□ -1.73
MECP2-209ENST00000486506 C10orf95Q9H7T3 257 aa4.22□□□□□ -1.73
MECP2-209ENST00000486506 RPL37P61927 97 aaKnown RBP4.22□□□□□ -1.73
MECP2-209ENST00000486506 ABCA13Q86UQ4 5058 aa4.22□□□□□ -1.73
MECP2-209ENST00000486506 TNXBP22105 4242 aa4.17□□□□□ -1.74
MECP2-209ENST00000486506 KRTAP10-8P60410 259 aa4.15□□□□□ -1.75
MECP2-209ENST00000486506 MT1HL1P0DM35 61 aa4.13□□□□□ -1.75
MECP2-209ENST00000486506 PCLOQ9Y6V0 5065 aa4.13□□□□□ -1.75
MECP2-209ENST00000486506 C9orf92A6NGG3 77 aa4.11□□□□□ -1.75
MECP2-209ENST00000486506 PLAC4Q8WY50 150 aa4.09□□□□□ -1.75
MECP2-209ENST00000486506 LCE2BO14633 110 aa4.08□□□□□ -1.76
MECP2-209ENST00000486506 RPS29P62273 56 aaKnown RBP4.08□□□□□ -1.76
MECP2-209ENST00000486506 LCE2CQ5TA81 110 aa4.08□□□□□ -1.76
MECP2-209ENST00000486506 LPAP08519 4548 aa4.07□□□□□ -1.76
MECP2-209ENST00000486506 PRO2289Q9P1D8 64 aa4.06□□□□□ -1.76
MECP2-209ENST00000486506 XP32Q5T750 250 aa4.06□□□□□ -1.76
MECP2-209ENST00000486506 HERC1Q15751 4861 aa4.05□□□□□ -1.76
MECP2-209ENST00000486506 LRP2P98164 4655 aa4.03□□□□□ -1.76
MECP2-209ENST00000486506 LCE2AQ5TA79 106 aaPredicted RBP4.03□□□□□ -1.76
MECP2-209ENST00000486506 KRTAP3-1Q9BYR8 98 aa4.01□□□□□ -1.77
MECP2-209ENST00000486506 S4R3F8 94 aa4.01□□□□□ -1.77
MECP2-209ENST00000486506 KRTAP23-1A1A580 65 aa4.01□□□□□ -1.77
MECP2-209ENST00000486506 A0A0D9SG42 100 aa3.99□□□□□ -1.77
MECP2-209ENST00000486506 MUC2Q02817 5179 aa3.99□□□□□ -1.77
MECP2-209ENST00000486506 KRTAP13-4Q3LI77 160 aa3.97□□□□□ -1.77
MECP2-209ENST00000486506 KRTAP10-6P60371 365 aaPredicted RBP3.94□□□□□ -1.78
MECP2-209ENST00000486506 HMCN2Q8NDA2 5059 aa3.91□□□□□ -1.78
MECP2-209ENST00000486506 KRTAP12-2P59991 146 aa3.91□□□□□ -1.78
MECP2-209ENST00000486506 R4GN34 69 aa3.9□□□□□ -1.78
MECP2-209ENST00000486506 KRTAP12-1P59990 96 aa3.86□□□□□ -1.79
MECP2-209ENST00000486506 INE1O15225 51 aa3.86□□□□□ -1.79
MECP2-209ENST00000486506 RNF213Q63HN8 5207 aa3.85□□□□□ -1.79
MECP2-209ENST00000486506 UBR4Q5T4S7 5183 aa3.82□□□□□ -1.8
MECP2-209ENST00000486506 FAT4Q6V0I7 4981 aa3.76□□□□□ -1.81
MECP2-209ENST00000486506 PP632Q6XCG6 107 aa3.76□□□□□ -1.81
MECP2-209ENST00000486506 LORP23490 312 aaPredicted RBP3.74□□□□□ -1.81
MECP2-209ENST00000486506 KRTAP4-1Q9BYQ7 146 aa3.74□□□□□ -1.81
MECP2-209ENST00000486506 SPRR5A0A1B0GTR4 108 aa3.72□□□□□ -1.81
MECP2-209ENST00000486506 M0QZ58 72 aa3.72□□□□□ -1.81
MECP2-209ENST00000486506 MUC17Q685J3 4493 aa3.71□□□□□ -1.81
MECP2-209ENST00000486506 LOC100996750A0A140TA64 210 aa3.61□□□□□ -1.83
MECP2-209ENST00000486506 KRTAP4-6Q9BYQ5 205 aa3.61□□□□□ -1.83
MECP2-209ENST00000486506 KRTAP19-2Q3LHN2 52 aa3.6□□□□□ -1.83
MECP2-209ENST00000486506 FLGP20930 4061 aaPredicted RBP3.54□□□□□ -1.84
MECP2-209ENST00000486506 M0R2T5 61 aa3.49□□□□□ -1.85
MECP2-209ENST00000486506 MT1HP80294 61 aa3.49□□□□□ -1.85
MECP2-209ENST00000486506 KRTAP9-6A0A140TA67 174 aa3.42□□□□□ -1.86
MECP2-209ENST00000486506 FSIP2Q5CZC0 6907 aa3.4□□□□□ -1.87
MECP2-209ENST00000486506 KRTAP9-2Q9BYQ4 174 aa3.38□□□□□ -1.87
MECP2-209ENST00000486506 USH2AO75445 5202 aa3.35□□□□□ -1.87
MECP2-209ENST00000486506 KRTAP9-8Q9BYQ0 159 aa3.35□□□□□ -1.87
MECP2-209ENST00000486506 MT2AP02795 61 aa3.33□□□□□ -1.88
MECP2-209ENST00000486506 MT1FP04733 61 aa3.32□□□□□ -1.88
MECP2-209ENST00000486506 TNP1P09430 55 aa3.32□□□□□ -1.88
MECP2-209ENST00000486506 KRTAP10-10P60014 251 aa3.32□□□□□ -1.88
MECP2-209ENST00000486506 KRTAP4-8Q9BYQ9 185 aa3.26□□□□□ -1.89
MECP2-209ENST00000486506 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.24□□□□□ -1.89
MECP2-209ENST00000486506 KRTAP19-1Q8IUB9 90 aa3.23□□□□□ -1.89
MECP2-209ENST00000486506 KRTAP9-3Q9BYQ3 159 aa3.22□□□□□ -1.89
MECP2-209ENST00000486506 SPRR2GQ9BYE4 73 aa3.21□□□□□ -1.9
MECP2-209ENST00000486506 CRCT1Q9UGL9 99 aa3.2□□□□□ -1.9
MECP2-209ENST00000486506 LCE3BQ5TA77 95 aa3.14□□□□□ -1.91
MECP2-209ENST00000486506 KMT2DO14686 5537 aa3.14□□□□□ -1.91
MECP2-209ENST00000486506 MT1BP07438 61 aa3.12□□□□□ -1.91
MECP2-209ENST00000486506 KRTAP19-8Q3LI54 63 aa3.12□□□□□ -1.91
MECP2-209ENST00000486506 SSPOA2VEC9 5147 aa3.08□□□□□ -1.92
MECP2-209ENST00000486506 KRTAP9-9Q9BYP9 154 aa3.06□□□□□ -1.92
MECP2-209ENST00000486506 KRTAP9-4Q9BYQ2 154 aa3.06□□□□□ -1.92
MECP2-209ENST00000486506 LCE3AQ5TA76 89 aa3.04□□□□□ -1.92
MECP2-209ENST00000486506 KRTAP4-12Q9BQ66 201 aa3.04□□□□□ -1.92
MECP2-209ENST00000486506 KRTAP4-8A0A0G2JLE6 195 aa3.03□□□□□ -1.93
MECP2-209ENST00000486506 MT1XP80297 61 aa3□□□□□ -1.93
MECP2-209ENST00000486506 KRTAP9-7A8MTY7 169 aa3□□□□□ -1.93
MECP2-209ENST00000486506 KRTAP10-5P60370 271 aa2.99□□□□□ -1.93
MECP2-209ENST00000486506 KRTAP10-12P60413 245 aa2.99□□□□□ -1.93
MECP2-209ENST00000486506 KRTAP8-1Q8IUC2 63 aa2.99□□□□□ -1.93
MECP2-209ENST00000486506 FCGBPQ9Y6R7 5405 aaPredicted RBP2.96□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms