RNA–Protein interactions for RNA: ENST00000485835.1

PSMD3-203, Transcript of proteasome 26S subunit, non-ATPase 3, humanhuman

TSL 2

Gene PSMD3, Length 2,888 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD3-203ENST00000485835 PLAC4Q8WY50 150 aa5.39□□□□□ -1.55
PSMD3-203ENST00000485835 C9orf92A6NGG3 77 aa5.38□□□□□ -1.55
PSMD3-203ENST00000485835 SACSQ9NZJ4 4579 aa5.34□□□□□ -1.55
PSMD3-203ENST00000485835 DNAH5Q8TE73 4624 aa5.33□□□□□ -1.56
PSMD3-203ENST00000485835 DMBT1Q9UGM3 2413 aaPredicted RBP5.33□□□□□ -1.56
PSMD3-203ENST00000485835 STARD9Q9P2P6 4700 aa5.3□□□□□ -1.56
PSMD3-203ENST00000485835 RYR2Q92736 4967 aa5.3□□□□□ -1.56
PSMD3-203ENST00000485835 LRP1BQ9NZR2 4599 aa5.29□□□□□ -1.56
PSMD3-203ENST00000485835 EPPK1P58107 5090 aaKnown RBP5.27□□□□□ -1.57
PSMD3-203ENST00000485835 HYDINQ4G0P3 5121 aa5.26□□□□□ -1.57
PSMD3-203ENST00000485835 KRTAP10-2P60368 255 aa5.25□□□□□ -1.57
PSMD3-203ENST00000485835 VPS13BQ7Z7G8 4022 aa5.23□□□□□ -1.57
PSMD3-203ENST00000485835 M0QZ58 72 aa5.21□□□□□ -1.58
PSMD3-203ENST00000485835 PKHD1L1Q86WI1 4243 aa5.2□□□□□ -1.58
PSMD3-203ENST00000485835 KRTAP10-1P60331 282 aa5.2□□□□□ -1.58
PSMD3-203ENST00000485835 BIRC6Q9NR09 4857 aa5.19□□□□□ -1.58
PSMD3-203ENST00000485835 MYCBP2O75592 4640 aa5.17□□□□□ -1.58
PSMD3-203ENST00000485835 PKD1P98161 4303 aa5.17□□□□□ -1.58
PSMD3-203ENST00000485835 CAMK2N1Q7Z7J9 78 aa5.15□□□□□ -1.58
PSMD3-203ENST00000485835 KRTAP10-8P60410 259 aa5.12□□□□□ -1.59
PSMD3-203ENST00000485835 PKHD1P08F94 4074 aa5.1□□□□□ -1.59
PSMD3-203ENST00000485835 PP632Q6XCG6 107 aa5.07□□□□□ -1.6
PSMD3-203ENST00000485835 FAT2Q9NYQ8 4349 aa5.07□□□□□ -1.6
PSMD3-203ENST00000485835 APOBP04114 4563 aaKnown RBP5.06□□□□□ -1.6
PSMD3-203ENST00000485835 PRO2289Q9P1D8 64 aa5.05□□□□□ -1.6
PSMD3-203ENST00000485835 LRP1Q07954 4544 aaKnown RBP5.05□□□□□ -1.6
PSMD3-203ENST00000485835 TNXBP22105 4242 aa5.01□□□□□ -1.61
PSMD3-203ENST00000485835 KIAA1109Q2LD37 5005 aa5.01□□□□□ -1.61
PSMD3-203ENST00000485835 J3QL48 77 aa5.01□□□□□ -1.61
PSMD3-203ENST00000485835 KRTAP17-1Q9BYP8 105 aa5□□□□□ -1.61
PSMD3-203ENST00000485835 HERC2O95714 4834 aa4.99□□□□□ -1.61
PSMD3-203ENST00000485835 SPRR5A0A1B0GTR4 108 aa4.99□□□□□ -1.61
PSMD3-203ENST00000485835 RYR1P21817 5038 aa4.96□□□□□ -1.61
PSMD3-203ENST00000485835 PCLOQ9Y6V0 5065 aa4.94□□□□□ -1.62
PSMD3-203ENST00000485835 DYNC1H1Q14204 4646 aaKnown RBP4.94□□□□□ -1.62
PSMD3-203ENST00000485835 FAT3Q8TDW7 4589 aa4.93□□□□□ -1.62
PSMD3-203ENST00000485835 HSPG2P98160 4391 aa4.93□□□□□ -1.62
PSMD3-203ENST00000485835 R4GN34 69 aa4.91□□□□□ -1.62
PSMD3-203ENST00000485835 A0A1B0GVY2 172 aa4.9□□□□□ -1.63
PSMD3-203ENST00000485835 KRTAP10-4P60372 401 aaPredicted RBP4.86□□□□□ -1.63
PSMD3-203ENST00000485835 ABCA13Q86UQ4 5058 aa4.86□□□□□ -1.63
PSMD3-203ENST00000485835 INE1O15225 51 aa4.86□□□□□ -1.63
PSMD3-203ENST00000485835 KRTAP4-5Q9BYR2 181 aa4.84□□□□□ -1.63
PSMD3-203ENST00000485835 SMR3BP02814 79 aaPredicted RBP4.83□□□□□ -1.64
PSMD3-203ENST00000485835 FAT1Q14517 4588 aa4.82□□□□□ -1.64
PSMD3-203ENST00000485835 KRTAP23-1A1A580 65 aa4.79□□□□□ -1.64
PSMD3-203ENST00000485835 LORP23490 312 aaPredicted RBP4.75□□□□□ -1.65
PSMD3-203ENST00000485835 HERC1Q15751 4861 aa4.73□□□□□ -1.65
PSMD3-203ENST00000485835 TNP1P09430 55 aa4.66□□□□□ -1.66
PSMD3-203ENST00000485835 LCE2DQ5TA82 110 aaPredicted RBP4.66□□□□□ -1.66
PSMD3-203ENST00000485835 Q5VSD8 79 aa4.63□□□□□ -1.67
PSMD3-203ENST00000485835 LPAP08519 4548 aa4.62□□□□□ -1.67
PSMD3-203ENST00000485835 FLGP20930 4061 aaPredicted RBP4.54□□□□□ -1.68
PSMD3-203ENST00000485835 UBR4Q5T4S7 5183 aa4.5□□□□□ -1.69
PSMD3-203ENST00000485835 LRP2P98164 4655 aa4.47□□□□□ -1.69
PSMD3-203ENST00000485835 HMCN2Q8NDA2 5059 aa4.47□□□□□ -1.69
PSMD3-203ENST00000485835 MUC17Q685J3 4493 aa4.4□□□□□ -1.7
PSMD3-203ENST00000485835 MT1HL1P0DM35 61 aa4.37□□□□□ -1.71
PSMD3-203ENST00000485835 RNF213Q63HN8 5207 aa4.36□□□□□ -1.71
PSMD3-203ENST00000485835 LCE3AQ5TA76 89 aa4.35□□□□□ -1.71
PSMD3-203ENST00000485835 KRTAP19-2Q3LHN2 52 aa4.3□□□□□ -1.72
PSMD3-203ENST00000485835 KRTAP8-1Q8IUC2 63 aa4.26□□□□□ -1.73
PSMD3-203ENST00000485835 KRTAP10-10P60014 251 aa4.24□□□□□ -1.73
PSMD3-203ENST00000485835 KRTAP4-1Q9BYQ7 146 aa4.24□□□□□ -1.73
PSMD3-203ENST00000485835 KRTAP10-12P60413 245 aa4.21□□□□□ -1.73
PSMD3-203ENST00000485835 LCE2CQ5TA81 110 aa4.21□□□□□ -1.74
PSMD3-203ENST00000485835 LCE2BO14633 110 aa4.2□□□□□ -1.74
PSMD3-203ENST00000485835 MUC2Q02817 5179 aa4.2□□□□□ -1.74
PSMD3-203ENST00000485835 LCE2AQ5TA79 106 aaPredicted RBP4.12□□□□□ -1.75
PSMD3-203ENST00000485835 SPRR2GQ9BYE4 73 aa4.12□□□□□ -1.75
PSMD3-203ENST00000485835 KRTAP12-3P60328 96 aa4.11□□□□□ -1.75
PSMD3-203ENST00000485835 KRTAP10-5P60370 271 aa4.06□□□□□ -1.76
PSMD3-203ENST00000485835 KRTAP19-1Q8IUB9 90 aa4.04□□□□□ -1.76
PSMD3-203ENST00000485835 FAT4Q6V0I7 4981 aa4.04□□□□□ -1.76
PSMD3-203ENST00000485835 KRTAP9-2Q9BYQ4 174 aa3.94□□□□□ -1.78
PSMD3-203ENST00000485835 KRTAP2-3P0C7H8 128 aa3.94□□□□□ -1.78
PSMD3-203ENST00000485835 KRTAP2-4Q9BYR9 128 aa3.94□□□□□ -1.78
PSMD3-203ENST00000485835 KRTAP2-1Q9BYU5 128 aa3.94□□□□□ -1.78
PSMD3-203ENST00000485835 LCE3CQ5T5A8 94 aa3.92□□□□□ -1.78
PSMD3-203ENST00000485835 MT1XP80297 61 aa3.87□□□□□ -1.79
PSMD3-203ENST00000485835 FSIP2Q5CZC0 6907 aa3.87□□□□□ -1.79
PSMD3-203ENST00000485835 KRTAP19-8Q3LI54 63 aa3.84□□□□□ -1.79
PSMD3-203ENST00000485835 KRTAP9-6A0A140TA67 174 aa3.82□□□□□ -1.8
PSMD3-203ENST00000485835 KRTAP9-6A8MVA2 160 aa3.82□□□□□ -1.8
PSMD3-203ENST00000485835 KRTAP10-7P60409 375 aaPredicted RBP3.81□□□□□ -1.8
PSMD3-203ENST00000485835 MT1BP07438 61 aa3.76□□□□□ -1.81
PSMD3-203ENST00000485835 KRTAP19-5Q3LI72 72 aa3.74□□□□□ -1.81
PSMD3-203ENST00000485835 MT1FP04733 61 aa3.74□□□□□ -1.81
PSMD3-203ENST00000485835 MT1HP80294 61 aa3.72□□□□□ -1.81
PSMD3-203ENST00000485835 MT2AP02795 61 aa3.72□□□□□ -1.81
PSMD3-203ENST00000485835 CRCT1Q9UGL9 99 aa3.71□□□□□ -1.82
PSMD3-203ENST00000485835 M0R2T5 61 aa3.69□□□□□ -1.82
PSMD3-203ENST00000485835 KRTAP9-8Q9BYQ0 159 aa3.62□□□□□ -1.83
PSMD3-203ENST00000485835 USH2AO75445 5202 aa3.56□□□□□ -1.84
PSMD3-203ENST00000485835 KRTAP12-4P60329 112 aa3.55□□□□□ -1.84
PSMD3-203ENST00000485835 KRTAP19-4Q3LI73 84 aa3.55□□□□□ -1.84
PSMD3-203ENST00000485835 SSPOA2VEC9 5147 aa3.54□□□□□ -1.84
PSMD3-203ENST00000485835 KRTAP4-7Q9BYR0 210 aa3.53□□□□□ -1.85
PSMD3-203ENST00000485835 FCGBPQ9Y6R7 5405 aaPredicted RBP3.46□□□□□ -1.86
PSMD3-203ENST00000485835 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 72.5 ms