RNA–Protein interactions for RNA: ENST00000485155.1

MDH1-212, Transcript of malate dehydrogenase 1, humanhuman

TSL 1 (best)

Gene MDH1, Length 571 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDH1-212ENST00000485155 LRRK2Q5S007 2527 aa1.84□□□□□ -2.12
MDH1-212ENST00000485155 MXRA5Q9NR99 2828 aa1.84□□□□□ -2.12
MDH1-212ENST00000485155 BAHCC1Q9P281 2608 aa1.83□□□□□ -2.12
MDH1-212ENST00000485155 LAMA5O15230 3695 aa1.83□□□□□ -2.12
MDH1-212ENST00000485155 USP9YO00507 2555 aaPredicted RBP1.83□□□□□ -2.12
MDH1-212ENST00000485155 DMBT1Q9UGM3 2413 aaPredicted RBP1.82□□□□□ -2.12
MDH1-212ENST00000485155 CFAP46Q8IYW2 2715 aa1.81□□□□□ -2.12
MDH1-212ENST00000485155 FASNP49327 2511 aaKnown RBP1.81□□□□□ -2.12
MDH1-212ENST00000485155 ABCA12Q86UK0 2595 aa1.8□□□□□ -2.12
MDH1-212ENST00000485155 EPG5Q9HCE0 2579 aa1.8□□□□□ -2.12
MDH1-212ENST00000485155 ASPMQ8IZT6 3477 aa1.8□□□□□ -2.12
MDH1-212ENST00000485155 ANK3Q12955 4377 aaKnown RBP1.8□□□□□ -2.12
MDH1-212ENST00000485155 BSNQ9UPA5 3926 aa1.8□□□□□ -2.12
MDH1-212ENST00000485155 SETD2Q9BYW2 2564 aaPredicted RBP1.8□□□□□ -2.12
MDH1-212ENST00000485155 HIVEP1P15822 2718 aa1.8□□□□□ -2.12
MDH1-212ENST00000485155 PDZD2O15018 2839 aa1.8□□□□□ -2.12
MDH1-212ENST00000485155 ACACBO00763 2458 aa1.79□□□□□ -2.12
MDH1-212ENST00000485155 RELNP78509 3460 aa1.78□□□□□ -2.12
MDH1-212ENST00000485155 J3QKU1 62 aa1.78□□□□□ -2.12
MDH1-212ENST00000485155 SVEP1Q4LDE5 3571 aa1.77□□□□□ -2.13
MDH1-212ENST00000485155 CACNA1AO00555 2505 aa1.77□□□□□ -2.13
MDH1-212ENST00000485155 EYSQ5T1H1 3165 aa1.77□□□□□ -2.13
MDH1-212ENST00000485155 STAB2Q8WWQ8 2551 aa1.76□□□□□ -2.13
MDH1-212ENST00000485155 FRAS1Q86XX4 4008 aa1.76□□□□□ -2.13
MDH1-212ENST00000485155 KRTAP21-2Q3LI59 83 aa1.76□□□□□ -2.13
MDH1-212ENST00000485155 NBEAL1Q6ZS30 2694 aa1.75□□□□□ -2.13
MDH1-212ENST00000485155 MYO18BQ8IUG5 2567 aa1.75□□□□□ -2.13
MDH1-212ENST00000485155 DNAH8Q96JB1 4490 aa1.75□□□□□ -2.13
MDH1-212ENST00000485155 ITPR3Q14573 2671 aa1.74□□□□□ -2.13
MDH1-212ENST00000485155 BDP1A6H8Y1 2624 aa1.74□□□□□ -2.13
MDH1-212ENST00000485155 COL7A1Q02388 2944 aa1.74□□□□□ -2.13
MDH1-212ENST00000485155 TRRAPQ9Y4A5 3859 aa1.74□□□□□ -2.13
MDH1-212ENST00000485155 ITPR2Q14571 2701 aa1.73□□□□□ -2.13
MDH1-212ENST00000485155 FBN2P35556 2912 aa1.73□□□□□ -2.13
MDH1-212ENST00000485155 POLQO75417 2590 aa1.73□□□□□ -2.13
MDH1-212ENST00000485155 ANK2Q01484 3957 aa1.72□□□□□ -2.13
MDH1-212ENST00000485155 DYNC2H1Q8NCM8 4307 aaKnown RBP1.72□□□□□ -2.13
MDH1-212ENST00000485155 ZNF292O60281 2723 aa1.71□□□□□ -2.14
MDH1-212ENST00000485155 DNAH3Q8TD57 4116 aa1.71□□□□□ -2.14
MDH1-212ENST00000485155 ZANQ9Y493 2812 aa1.71□□□□□ -2.14
MDH1-212ENST00000485155 VPS13CQ709C8 3753 aa1.71□□□□□ -2.14
MDH1-212ENST00000485155 CMYA5Q8N3K9 4069 aa1.71□□□□□ -2.14
MDH1-212ENST00000485155 MUC3AQ02505 3323 aa1.7□□□□□ -2.14
MDH1-212ENST00000485155 KRTAP12-4P60329 112 aa1.7□□□□□ -2.14
MDH1-212ENST00000485155 ATRQ13535 2644 aa1.7□□□□□ -2.14
MDH1-212ENST00000485155 CSMD2Q7Z408 3487 aa1.7□□□□□ -2.14
MDH1-212ENST00000485155 KRTAP8-1Q8IUC2 63 aa1.69□□□□□ -2.14
MDH1-212ENST00000485155 HUWE1Q7Z6Z7 4374 aaKnown RBP1.69□□□□□ -2.14
MDH1-212ENST00000485155 DNAH10Q8IVF4 4471 aa1.69□□□□□ -2.14
MDH1-212ENST00000485155 DNAH17Q9UFH2 4485 aa1.69□□□□□ -2.14
MDH1-212ENST00000485155 DNAH6Q9C0G6 4158 aa1.69□□□□□ -2.14
MDH1-212ENST00000485155 TEP1Q99973 2627 aaKnown RBP1.69□□□□□ -2.14
MDH1-212ENST00000485155 DNAH11Q96DT5 4516 aa1.68□□□□□ -2.14
MDH1-212ENST00000485155 PRKDCP78527 4128 aaKnown RBP1.68□□□□□ -2.14
MDH1-212ENST00000485155 DNAH9Q9NYC9 4486 aa1.68□□□□□ -2.14
MDH1-212ENST00000485155 NOTCH1P46531 2555 aa1.68□□□□□ -2.14
MDH1-212ENST00000485155 FBN3Q75N90 2809 aa1.67□□□□□ -2.14
MDH1-212ENST00000485155 PKD1L1Q8TDX9 2849 aa1.67□□□□□ -2.14
MDH1-212ENST00000485155 CSMD3Q7Z407 3707 aa1.67□□□□□ -2.14
MDH1-212ENST00000485155 TENM3Q9P273 2699 aa1.67□□□□□ -2.14
MDH1-212ENST00000485155 USP24Q9UPU5 2620 aa1.67□□□□□ -2.14
MDH1-212ENST00000485155 DNAH2Q9P225 4427 aa1.67□□□□□ -2.14
MDH1-212ENST00000485155 MAST4O15021 2626 aa1.66□□□□□ -2.14
MDH1-212ENST00000485155 FLNAP21333 2647 aaKnown RBP1.66□□□□□ -2.14
MDH1-212ENST00000485155 LYSTQ99698 3801 aa1.66□□□□□ -2.14
MDH1-212ENST00000485155 CUBNO60494 3623 aa1.64□□□□□ -2.15
MDH1-212ENST00000485155 MYCBP2O75592 4640 aa1.64□□□□□ -2.15
MDH1-212ENST00000485155 KRTAP12-3P60328 96 aa1.64□□□□□ -2.15
MDH1-212ENST00000485155 DNAH7Q8WXX0 4024 aa1.63□□□□□ -2.15
MDH1-212ENST00000485155 KRTAP21-3Q3LHN1 58 aa1.62□□□□□ -2.15
MDH1-212ENST00000485155 MGAM2Q2M2H8 2515 aa1.61□□□□□ -2.15
MDH1-212ENST00000485155 STAB1Q9NY15 2570 aa1.61□□□□□ -2.15
MDH1-212ENST00000485155 SACSQ9NZJ4 4579 aa1.61□□□□□ -2.15
MDH1-212ENST00000485155 KRTAP10-4P60372 401 aaPredicted RBP1.6□□□□□ -2.15
MDH1-212ENST00000485155 FLNBO75369 2602 aaKnown RBP1.59□□□□□ -2.15
MDH1-212ENST00000485155 NSD1Q96L73 2696 aaPredicted RBP1.59□□□□□ -2.15
MDH1-212ENST00000485155 M0R2T5 61 aa1.59□□□□□ -2.15
MDH1-212ENST00000485155 KRTAP2-3P0C7H8 128 aa1.59□□□□□ -2.15
MDH1-212ENST00000485155 KRTAP2-4Q9BYR9 128 aa1.59□□□□□ -2.15
MDH1-212ENST00000485155 KRTAP2-1Q9BYU5 128 aa1.59□□□□□ -2.15
MDH1-212ENST00000485155 IGSF10Q6WRI0 2623 aa1.58□□□□□ -2.16
MDH1-212ENST00000485155 HECTD4Q9Y4D8 3996 aa1.58□□□□□ -2.16
MDH1-212ENST00000485155 PKHD1L1Q86WI1 4243 aa1.55□□□□□ -2.16
MDH1-212ENST00000485155 PKD1P98161 4303 aa1.55□□□□□ -2.16
MDH1-212ENST00000485155 KMT2AQ03164 3969 aa1.54□□□□□ -2.16
MDH1-212ENST00000485155 LRP1Q07954 4544 aaKnown RBP1.54□□□□□ -2.16
MDH1-212ENST00000485155 FLNCQ14315 2725 aa1.53□□□□□ -2.16
MDH1-212ENST00000485155 APOBP04114 4563 aaKnown RBP1.53□□□□□ -2.16
MDH1-212ENST00000485155 SPRR2GQ9BYE4 73 aa1.53□□□□□ -2.16
MDH1-212ENST00000485155 CRCT1Q9UGL9 99 aa1.53□□□□□ -2.16
MDH1-212ENST00000485155 STARD9Q9P2P6 4700 aa1.52□□□□□ -2.17
MDH1-212ENST00000485155 HSPG2P98160 4391 aa1.52□□□□□ -2.17
MDH1-212ENST00000485155 TENM1Q9UKZ4 2725 aa1.52□□□□□ -2.17
MDH1-212ENST00000485155 PKHD1P08F94 4074 aa1.51□□□□□ -2.17
MDH1-212ENST00000485155 FLGP20930 4061 aaPredicted RBP1.5□□□□□ -2.17
MDH1-212ENST00000485155 SMR3BP02814 79 aaPredicted RBP1.49□□□□□ -2.17
MDH1-212ENST00000485155 DNAH5Q8TE73 4624 aa1.48□□□□□ -2.17
MDH1-212ENST00000485155 ZNF469Q96JG9 3925 aaPredicted RBP1.48□□□□□ -2.17
MDH1-212ENST00000485155 LRP1BQ9NZR2 4599 aa1.48□□□□□ -2.17
MDH1-212ENST00000485155 DYNC1H1Q14204 4646 aaKnown RBP1.48□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms