RNA–Protein interactions for RNA: ENST00000482855.5

RPGR-208, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,819 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-208ENST00000482855 VPS13BQ7Z7G8 4022 aa5.85□□□□□ -1.47
RPGR-208ENST00000482855 RYR1P21817 5038 aa5.83□□□□□ -1.48
RPGR-208ENST00000482855 APOBP04114 4563 aaKnown RBP5.81□□□□□ -1.48
RPGR-208ENST00000482855 TPRXLQ17RH7 258 aa5.8□□□□□ -1.48
RPGR-208ENST00000482855 PKHD1P08F94 4074 aa5.8□□□□□ -1.48
RPGR-208ENST00000482855 PKHD1L1Q86WI1 4243 aa5.8□□□□□ -1.48
RPGR-208ENST00000482855 A0A0D9SG42 100 aa5.78□□□□□ -1.48
RPGR-208ENST00000482855 HSPG2P98160 4391 aa5.78□□□□□ -1.48
RPGR-208ENST00000482855 KRTAP10-6P60371 365 aaPredicted RBP5.75□□□□□ -1.49
RPGR-208ENST00000482855 KRTAP13-4Q3LI77 160 aa5.75□□□□□ -1.49
RPGR-208ENST00000482855 C10orf95Q9H7T3 257 aa5.74□□□□□ -1.49
RPGR-208ENST00000482855 NDUFAF8A1L188 74 aa5.73□□□□□ -1.49
RPGR-208ENST00000482855 DMBT1Q9UGM3 2413 aaPredicted RBP5.72□□□□□ -1.49
RPGR-208ENST00000482855 KRTAP15-1Q3LI76 137 aa5.72□□□□□ -1.49
RPGR-208ENST00000482855 KIAA1109Q2LD37 5005 aa5.69□□□□□ -1.5
RPGR-208ENST00000482855 KRTAP10-4P60372 401 aaPredicted RBP5.68□□□□□ -1.5
RPGR-208ENST00000482855 KRTAP3-3Q9BYR6 98 aa5.68□□□□□ -1.5
RPGR-208ENST00000482855 KRTAP3-2Q9BYR7 98 aa5.68□□□□□ -1.5
RPGR-208ENST00000482855 Q5VSD8 79 aa5.66□□□□□ -1.5
RPGR-208ENST00000482855 KRTAP17-1Q9BYP8 105 aa5.65□□□□□ -1.5
RPGR-208ENST00000482855 S4R3F8 94 aa5.65□□□□□ -1.5
RPGR-208ENST00000482855 SMR3BP02814 79 aaPredicted RBP5.61□□□□□ -1.51
RPGR-208ENST00000482855 KRTAP12-2P59991 146 aa5.61□□□□□ -1.51
RPGR-208ENST00000482855 KRTAP4-5Q9BYR2 181 aa5.6□□□□□ -1.51
RPGR-208ENST00000482855 PCLOQ9Y6V0 5065 aa5.59□□□□□ -1.52
RPGR-208ENST00000482855 ABCA13Q86UQ4 5058 aa5.56□□□□□ -1.52
RPGR-208ENST00000482855 KRTAP12-1P59990 96 aa5.54□□□□□ -1.52
RPGR-208ENST00000482855 XP32Q5T750 250 aa5.52□□□□□ -1.53
RPGR-208ENST00000482855 KRTAP10-8P60410 259 aa5.52□□□□□ -1.53
RPGR-208ENST00000482855 FAT3Q8TDW7 4589 aa5.48□□□□□ -1.53
RPGR-208ENST00000482855 FAT1Q14517 4588 aa5.47□□□□□ -1.53
RPGR-208ENST00000482855 MYCBP2O75592 4640 aa5.44□□□□□ -1.54
RPGR-208ENST00000482855 MT1HL1P0DM35 61 aa5.44□□□□□ -1.54
RPGR-208ENST00000482855 M0QZ58 72 aa5.43□□□□□ -1.54
RPGR-208ENST00000482855 LRP1Q07954 4544 aaKnown RBP5.41□□□□□ -1.54
RPGR-208ENST00000482855 J3QL48 77 aa5.39□□□□□ -1.55
RPGR-208ENST00000482855 TNXBP22105 4242 aa5.38□□□□□ -1.55
RPGR-208ENST00000482855 A0A0A0MQY5 61 aa5.35□□□□□ -1.55
RPGR-208ENST00000482855 PLAC4Q8WY50 150 aa5.33□□□□□ -1.56
RPGR-208ENST00000482855 LUZP6Q538Z0 58 aa5.3□□□□□ -1.56
RPGR-208ENST00000482855 R4GN34 69 aa5.25□□□□□ -1.57
RPGR-208ENST00000482855 HMCN2Q8NDA2 5059 aa5.24□□□□□ -1.57
RPGR-208ENST00000482855 HERC1Q15751 4861 aa5.19□□□□□ -1.58
RPGR-208ENST00000482855 LPAP08519 4548 aa5.15□□□□□ -1.59
RPGR-208ENST00000482855 PP632Q6XCG6 107 aa5.13□□□□□ -1.59
RPGR-208ENST00000482855 MUC17Q685J3 4493 aa5.12□□□□□ -1.59
RPGR-208ENST00000482855 LRP2P98164 4655 aa5.08□□□□□ -1.6
RPGR-208ENST00000482855 LORP23490 312 aaPredicted RBP5.07□□□□□ -1.6
RPGR-208ENST00000482855 CAMK2N1Q7Z7J9 78 aa5.03□□□□□ -1.6
RPGR-208ENST00000482855 SEC61BP60468 96 aaKnown RBP4.92□□□□□ -1.62
RPGR-208ENST00000482855 SPRR5A0A1B0GTR4 108 aa4.87□□□□□ -1.63
RPGR-208ENST00000482855 TNP1P09430 55 aa4.87□□□□□ -1.63
RPGR-208ENST00000482855 UBR4Q5T4S7 5183 aa4.87□□□□□ -1.63
RPGR-208ENST00000482855 KRTAP23-1A1A580 65 aa4.85□□□□□ -1.63
RPGR-208ENST00000482855 RNF213Q63HN8 5207 aa4.85□□□□□ -1.63
RPGR-208ENST00000482855 LCE2AQ5TA79 106 aaPredicted RBP4.83□□□□□ -1.64
RPGR-208ENST00000482855 KRTAP4-1Q9BYQ7 146 aa4.79□□□□□ -1.64
RPGR-208ENST00000482855 KRTAP19-2Q3LHN2 52 aa4.74□□□□□ -1.65
RPGR-208ENST00000482855 PRO2289Q9P1D8 64 aa4.69□□□□□ -1.66
RPGR-208ENST00000482855 LCE2CQ5TA81 110 aa4.69□□□□□ -1.66
RPGR-208ENST00000482855 LCE2DQ5TA82 110 aaPredicted RBP4.65□□□□□ -1.66
RPGR-208ENST00000482855 FAT4Q6V0I7 4981 aa4.64□□□□□ -1.67
RPGR-208ENST00000482855 FLGP20930 4061 aaPredicted RBP4.62□□□□□ -1.67
RPGR-208ENST00000482855 MT1HP80294 61 aa4.59□□□□□ -1.67
RPGR-208ENST00000482855 INE1O15225 51 aa4.59□□□□□ -1.67
RPGR-208ENST00000482855 LCE3AQ5TA76 89 aa4.56□□□□□ -1.68
RPGR-208ENST00000482855 KRTAP9-2Q9BYQ4 174 aa4.51□□□□□ -1.69
RPGR-208ENST00000482855 MUC2Q02817 5179 aa4.5□□□□□ -1.69
RPGR-208ENST00000482855 SPRR2GQ9BYE4 73 aa4.49□□□□□ -1.69
RPGR-208ENST00000482855 KRTAP19-1Q8IUB9 90 aa4.45□□□□□ -1.7
RPGR-208ENST00000482855 KRTAP8-1Q8IUC2 63 aa4.43□□□□□ -1.7
RPGR-208ENST00000482855 KRTAP9-8Q9BYQ0 159 aa4.39□□□□□ -1.71
RPGR-208ENST00000482855 KRTAP9-6A0A140TA67 174 aa4.37□□□□□ -1.71
RPGR-208ENST00000482855 M0R2T5 61 aa4.34□□□□□ -1.72
RPGR-208ENST00000482855 KRTAP12-3P60328 96 aa4.33□□□□□ -1.72
RPGR-208ENST00000482855 MT2AP02795 61 aa4.3□□□□□ -1.72
RPGR-208ENST00000482855 CRCT1Q9UGL9 99 aa4.3□□□□□ -1.72
RPGR-208ENST00000482855 KRTAP10-12P60413 245 aa4.28□□□□□ -1.72
RPGR-208ENST00000482855 KRTAP9-3Q9BYQ3 159 aa4.27□□□□□ -1.73
RPGR-208ENST00000482855 KRTAP10-10P60014 251 aa4.26□□□□□ -1.73
RPGR-208ENST00000482855 MT1FP04733 61 aa4.24□□□□□ -1.73
RPGR-208ENST00000482855 KRTAP10-5P60370 271 aa4.24□□□□□ -1.73
RPGR-208ENST00000482855 KRTAP19-8Q3LI54 63 aa4.22□□□□□ -1.73
RPGR-208ENST00000482855 MT1XP80297 61 aa4.22□□□□□ -1.73
RPGR-208ENST00000482855 MT1BP07438 61 aa4.16□□□□□ -1.74
RPGR-208ENST00000482855 KRTAP19-6Q3LI70 58 aa4.15□□□□□ -1.75
RPGR-208ENST00000482855 LCE2BO14633 110 aa4.14□□□□□ -1.75
RPGR-208ENST00000482855 KRTAP10-7P60409 375 aaPredicted RBP4.14□□□□□ -1.75
RPGR-208ENST00000482855 LCE3CQ5T5A8 94 aa4.08□□□□□ -1.76
RPGR-208ENST00000482855 USH2AO75445 5202 aa4.04□□□□□ -1.76
RPGR-208ENST00000482855 KRTAP19-5Q3LI72 72 aa4.03□□□□□ -1.76
RPGR-208ENST00000482855 SSPOA2VEC9 5147 aa4.02□□□□□ -1.77
RPGR-208ENST00000482855 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.01□□□□□ -1.77
RPGR-208ENST00000482855 KRTAP9-6A8MVA2 160 aa3.95□□□□□ -1.78
RPGR-208ENST00000482855 KRTAP2-3P0C7H8 128 aa3.94□□□□□ -1.78
RPGR-208ENST00000482855 KRTAP2-4Q9BYR9 128 aa3.94□□□□□ -1.78
RPGR-208ENST00000482855 KRTAP2-1Q9BYU5 128 aa3.94□□□□□ -1.78
RPGR-208ENST00000482855 KRTAP9-7A8MTY7 169 aa3.91□□□□□ -1.78
RPGR-208ENST00000482855 KRTAP6-3Q3LI67 103 aa3.9□□□□□ -1.78
RPGR-208ENST00000482855 FCGBPQ9Y6R7 5405 aaPredicted RBP3.88□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 69.4 ms