RNA–Protein interactions for RNA: ENST00000482843.5

RAPGEF3-210, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 2

Gene RAPGEF3, Length 3,395 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-210ENST00000482843 RPS29P62273 56 aaKnown RBP6.49□□□□□ -1.37
RAPGEF3-210ENST00000482843 KRTAP10-4P60372 401 aaPredicted RBP6.47□□□□□ -1.37
RAPGEF3-210ENST00000482843 APOBP04114 4563 aaKnown RBP6.46□□□□□ -1.38
RAPGEF3-210ENST00000482843 LRP1Q07954 4544 aaKnown RBP6.45□□□□□ -1.38
RAPGEF3-210ENST00000482843 MYCBP2O75592 4640 aa6.42□□□□□ -1.38
RAPGEF3-210ENST00000482843 RYR2Q92736 4967 aa6.42□□□□□ -1.38
RAPGEF3-210ENST00000482843 CAMK2N1Q7Z7J9 78 aa6.41□□□□□ -1.38
RAPGEF3-210ENST00000482843 KIAA1109Q2LD37 5005 aa6.37□□□□□ -1.39
RAPGEF3-210ENST00000482843 KRTAP3-1Q9BYR8 98 aa6.32□□□□□ -1.4
RAPGEF3-210ENST00000482843 KRTAP10-8P60410 259 aa6.32□□□□□ -1.4
RAPGEF3-210ENST00000482843 C10orf95Q9H7T3 257 aa6.31□□□□□ -1.4
RAPGEF3-210ENST00000482843 COX6B2Q6YFQ2 88 aa6.31□□□□□ -1.4
RAPGEF3-210ENST00000482843 RYR3Q15413 4870 aa6.3□□□□□ -1.4
RAPGEF3-210ENST00000482843 A0A1B0GU33 70 aa6.29□□□□□ -1.4
RAPGEF3-210ENST00000482843 XP32Q5T750 250 aa6.27□□□□□ -1.41
RAPGEF3-210ENST00000482843 FAT3Q8TDW7 4589 aa6.27□□□□□ -1.41
RAPGEF3-210ENST00000482843 KRTAP17-1Q9BYP8 105 aa6.26□□□□□ -1.41
RAPGEF3-210ENST00000482843 RPL37P61927 97 aaKnown RBP6.25□□□□□ -1.41
RAPGEF3-210ENST00000482843 TPRXLQ17RH7 258 aa6.25□□□□□ -1.41
RAPGEF3-210ENST00000482843 A0A0D9SG42 100 aa6.23□□□□□ -1.41
RAPGEF3-210ENST00000482843 HSPG2P98160 4391 aa6.22□□□□□ -1.41
RAPGEF3-210ENST00000482843 PKHD1L1Q86WI1 4243 aa6.22□□□□□ -1.41
RAPGEF3-210ENST00000482843 RYR1P21817 5038 aa6.22□□□□□ -1.41
RAPGEF3-210ENST00000482843 H0YAA0 97 aa6.21□□□□□ -1.42
RAPGEF3-210ENST00000482843 H1FX-AS1Q4G0G2 97 aa6.18□□□□□ -1.42
RAPGEF3-210ENST00000482843 S4R3F8 94 aa6.18□□□□□ -1.42
RAPGEF3-210ENST00000482843 MT1HL1P0DM35 61 aa6.16□□□□□ -1.42
RAPGEF3-210ENST00000482843 KRTAP4-5Q9BYR2 181 aa6.14□□□□□ -1.43
RAPGEF3-210ENST00000482843 EPPK1P58107 5090 aaKnown RBP6.11□□□□□ -1.43
RAPGEF3-210ENST00000482843 TNXBP22105 4242 aa6.09□□□□□ -1.43
RAPGEF3-210ENST00000482843 LRP2P98164 4655 aa6.07□□□□□ -1.44
RAPGEF3-210ENST00000482843 R4GN34 69 aa6.06□□□□□ -1.44
RAPGEF3-210ENST00000482843 KRTAP3-3Q9BYR6 98 aa6.02□□□□□ -1.45
RAPGEF3-210ENST00000482843 LPAP08519 4548 aa6□□□□□ -1.45
RAPGEF3-210ENST00000482843 KRTAP23-1A1A580 65 aa5.98□□□□□ -1.45
RAPGEF3-210ENST00000482843 ABCA13Q86UQ4 5058 aa5.97□□□□□ -1.45
RAPGEF3-210ENST00000482843 KRTAP10-6P60371 365 aaPredicted RBP5.96□□□□□ -1.46
RAPGEF3-210ENST00000482843 KRTAP13-4Q3LI77 160 aa5.96□□□□□ -1.46
RAPGEF3-210ENST00000482843 KRTAP3-2Q9BYR7 98 aa5.9□□□□□ -1.46
RAPGEF3-210ENST00000482843 PRO2289Q9P1D8 64 aa5.89□□□□□ -1.47
RAPGEF3-210ENST00000482843 M0QZ58 72 aa5.86□□□□□ -1.47
RAPGEF3-210ENST00000482843 HERC2O95714 4834 aa5.86□□□□□ -1.47
RAPGEF3-210ENST00000482843 PLAC4Q8WY50 150 aa5.85□□□□□ -1.47
RAPGEF3-210ENST00000482843 KRTAP12-2P59991 146 aa5.8□□□□□ -1.48
RAPGEF3-210ENST00000482843 MUC2Q02817 5179 aa5.77□□□□□ -1.49
RAPGEF3-210ENST00000482843 KRTAP4-1Q9BYQ7 146 aa5.75□□□□□ -1.49
RAPGEF3-210ENST00000482843 KRTAP12-1P59990 96 aa5.7□□□□□ -1.5
RAPGEF3-210ENST00000482843 LORP23490 312 aaPredicted RBP5.65□□□□□ -1.5
RAPGEF3-210ENST00000482843 HERC1Q15751 4861 aa5.64□□□□□ -1.51
RAPGEF3-210ENST00000482843 M0R2T5 61 aa5.62□□□□□ -1.51
RAPGEF3-210ENST00000482843 BIRC6Q9NR09 4857 aa5.56□□□□□ -1.52
RAPGEF3-210ENST00000482843 PCLOQ9Y6V0 5065 aa5.54□□□□□ -1.52
RAPGEF3-210ENST00000482843 RNF213Q63HN8 5207 aa5.49□□□□□ -1.53
RAPGEF3-210ENST00000482843 FAT4Q6V0I7 4981 aa5.49□□□□□ -1.53
RAPGEF3-210ENST00000482843 MUC17Q685J3 4493 aa5.49□□□□□ -1.53
RAPGEF3-210ENST00000482843 INE1O15225 51 aa5.39□□□□□ -1.55
RAPGEF3-210ENST00000482843 KRTAP19-2Q3LHN2 52 aa5.39□□□□□ -1.55
RAPGEF3-210ENST00000482843 UBR4Q5T4S7 5183 aa5.37□□□□□ -1.55
RAPGEF3-210ENST00000482843 HMCN2Q8NDA2 5059 aa5.36□□□□□ -1.55
RAPGEF3-210ENST00000482843 KRTAP10-10P60014 251 aa5.32□□□□□ -1.56
RAPGEF3-210ENST00000482843 FLGP20930 4061 aaPredicted RBP5.3□□□□□ -1.56
RAPGEF3-210ENST00000482843 TNP1P09430 55 aa5.24□□□□□ -1.57
RAPGEF3-210ENST00000482843 LCE2CQ5TA81 110 aa5.22□□□□□ -1.57
RAPGEF3-210ENST00000482843 PP632Q6XCG6 107 aa5.21□□□□□ -1.58
RAPGEF3-210ENST00000482843 MT1HP80294 61 aa5.19□□□□□ -1.58
RAPGEF3-210ENST00000482843 MT1FP04733 61 aa5.1□□□□□ -1.59
RAPGEF3-210ENST00000482843 MT2AP02795 61 aa5.09□□□□□ -1.59
RAPGEF3-210ENST00000482843 KRTAP19-1Q8IUB9 90 aa5.09□□□□□ -1.59
RAPGEF3-210ENST00000482843 SPRR2GQ9BYE4 73 aa5.04□□□□□ -1.6
RAPGEF3-210ENST00000482843 KRTAP9-8Q9BYQ0 159 aa4.99□□□□□ -1.61
RAPGEF3-210ENST00000482843 LCE2AQ5TA79 106 aaPredicted RBP4.98□□□□□ -1.61
RAPGEF3-210ENST00000482843 LCE3AQ5TA76 89 aa4.93□□□□□ -1.62
RAPGEF3-210ENST00000482843 USH2AO75445 5202 aa4.87□□□□□ -1.63
RAPGEF3-210ENST00000482843 MT1BP07438 61 aa4.83□□□□□ -1.64
RAPGEF3-210ENST00000482843 SPRR5A0A1B0GTR4 108 aa4.83□□□□□ -1.64
RAPGEF3-210ENST00000482843 FSIP2Q5CZC0 6907 aa4.83□□□□□ -1.64
RAPGEF3-210ENST00000482843 KRTAP19-8Q3LI54 63 aa4.79□□□□□ -1.64
RAPGEF3-210ENST00000482843 KRTAP10-12P60413 245 aa4.78□□□□□ -1.64
RAPGEF3-210ENST00000482843 MT1XP80297 61 aa4.78□□□□□ -1.64
RAPGEF3-210ENST00000482843 KRTAP10-5P60370 271 aa4.78□□□□□ -1.65
RAPGEF3-210ENST00000482843 KRTAP9-3Q9BYQ3 159 aa4.77□□□□□ -1.65
RAPGEF3-210ENST00000482843 KRTAP10-7P60409 375 aaPredicted RBP4.74□□□□□ -1.65
RAPGEF3-210ENST00000482843 LCE2DQ5TA82 110 aaPredicted RBP4.72□□□□□ -1.65
RAPGEF3-210ENST00000482843 KRTAP12-3P60328 96 aa4.7□□□□□ -1.66
RAPGEF3-210ENST00000482843 LCE2BO14633 110 aa4.69□□□□□ -1.66
RAPGEF3-210ENST00000482843 KMT2DO14686 5537 aa4.69□□□□□ -1.66
RAPGEF3-210ENST00000482843 KRTAP8-1Q8IUC2 63 aa4.63□□□□□ -1.67
RAPGEF3-210ENST00000482843 KRTAP4-8A0A0G2JLE6 195 aa4.56□□□□□ -1.68
RAPGEF3-210ENST00000482843 KRTAP4-8Q9BYQ9 185 aa4.56□□□□□ -1.68
RAPGEF3-210ENST00000482843 KRTAP19-5Q3LI72 72 aa4.54□□□□□ -1.68
RAPGEF3-210ENST00000482843 LCE3CQ5T5A8 94 aa4.34□□□□□ -1.71
RAPGEF3-210ENST00000482843 SSPOA2VEC9 5147 aa4.34□□□□□ -1.71
RAPGEF3-210ENST00000482843 KRTAP4-7Q9BYR0 210 aa4.34□□□□□ -1.72
RAPGEF3-210ENST00000482843 DSTQ03001 7570 aaKnown RBP4.25□□□□□ -1.73
RAPGEF3-210ENST00000482843 KRTAP19-7Q3SYF9 63 aa4.24□□□□□ -1.73
RAPGEF3-210ENST00000482843 KRTAP2-2Q9BYT5 123 aa4.23□□□□□ -1.73
RAPGEF3-210ENST00000482843 CRCT1Q9UGL9 99 aa4.21□□□□□ -1.74
RAPGEF3-210ENST00000482843 MUC12Q9UKN1 5478 aa4.21□□□□□ -1.74
RAPGEF3-210ENST00000482843 LCE1EQ5T753 118 aa4.2□□□□□ -1.74
RAPGEF3-210ENST00000482843 LCE1AQ5T7P2 110 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms