RNA–Protein interactions for RNA: ENST00000482722.5

COL9A2-207, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 1 (best)

Gene COL9A2, Length 2,887 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-207ENST00000482722 EPPK1P58107 5090 aaKnown RBP7.72□□□□□ -1.17
COL9A2-207ENST00000482722 KRTAP3-1Q9BYR8 98 aa7.7□□□□□ -1.18
COL9A2-207ENST00000482722 KRTAP10-4P60372 401 aaPredicted RBP7.69□□□□□ -1.18
COL9A2-207ENST00000482722 KRTAP17-1Q9BYP8 105 aa7.68□□□□□ -1.18
COL9A2-207ENST00000482722 RYR1P21817 5038 aa7.63□□□□□ -1.19
COL9A2-207ENST00000482722 P0C880 135 aa7.62□□□□□ -1.19
COL9A2-207ENST00000482722 K7ERS5 55 aa7.61□□□□□ -1.19
COL9A2-207ENST00000482722 FAT3Q8TDW7 4589 aa7.6□□□□□ -1.19
COL9A2-207ENST00000482722 COX6B2Q6YFQ2 88 aa7.6□□□□□ -1.19
COL9A2-207ENST00000482722 RPS29P62273 56 aaKnown RBP7.59□□□□□ -1.19
COL9A2-207ENST00000482722 TNXBP22105 4242 aa7.59□□□□□ -1.2
COL9A2-207ENST00000482722 Q5VSD8 79 aa7.55□□□□□ -1.2
COL9A2-207ENST00000482722 C20orf166-AS1Q96NR2 134 aa7.54□□□□□ -1.2
COL9A2-207ENST00000482722 J3QL48 77 aa7.53□□□□□ -1.2
COL9A2-207ENST00000482722 TPRXLQ17RH7 258 aa7.45□□□□□ -1.22
COL9A2-207ENST00000482722 RPL37P61927 97 aaKnown RBP7.44□□□□□ -1.22
COL9A2-207ENST00000482722 SPINT4Q6UDR6 99 aa7.44□□□□□ -1.22
COL9A2-207ENST00000482722 ABCA13Q86UQ4 5058 aa7.43□□□□□ -1.22
COL9A2-207ENST00000482722 A0A0D9SG42 100 aa7.42□□□□□ -1.22
COL9A2-207ENST00000482722 KRTAP13-4Q3LI77 160 aa7.42□□□□□ -1.22
COL9A2-207ENST00000482722 KRTAP10-6P60371 365 aaPredicted RBP7.4□□□□□ -1.22
COL9A2-207ENST00000482722 LPAP08519 4548 aa7.4□□□□□ -1.23
COL9A2-207ENST00000482722 C10orf95Q9H7T3 257 aa7.38□□□□□ -1.23
COL9A2-207ENST00000482722 KRTAP4-5Q9BYR2 181 aa7.38□□□□□ -1.23
COL9A2-207ENST00000482722 KRTAP10-8P60410 259 aa7.36□□□□□ -1.23
COL9A2-207ENST00000482722 LRP2P98164 4655 aa7.36□□□□□ -1.23
COL9A2-207ENST00000482722 KRTAP3-3Q9BYR6 98 aa7.33□□□□□ -1.24
COL9A2-207ENST00000482722 KRTAP3-2Q9BYR7 98 aa7.32□□□□□ -1.24
COL9A2-207ENST00000482722 NDUFAF8A1L188 74 aa7.3□□□□□ -1.24
COL9A2-207ENST00000482722 KRTAP15-1Q3LI76 137 aa7.29□□□□□ -1.24
COL9A2-207ENST00000482722 MT1HL1P0DM35 61 aa7.27□□□□□ -1.25
COL9A2-207ENST00000482722 S4R3F8 94 aa7.22□□□□□ -1.25
COL9A2-207ENST00000482722 HERC2O95714 4834 aa7.22□□□□□ -1.25
COL9A2-207ENST00000482722 KRTAP12-2P59991 146 aa7.21□□□□□ -1.26
COL9A2-207ENST00000482722 XP32Q5T750 250 aa7.21□□□□□ -1.26
COL9A2-207ENST00000482722 KRTAP12-1P59990 96 aa7.1□□□□□ -1.27
COL9A2-207ENST00000482722 MUC2Q02817 5179 aa7.1□□□□□ -1.27
COL9A2-207ENST00000482722 HERC1Q15751 4861 aa7.05□□□□□ -1.28
COL9A2-207ENST00000482722 PCLOQ9Y6V0 5065 aa7.01□□□□□ -1.29
COL9A2-207ENST00000482722 BIRC6Q9NR09 4857 aa6.98□□□□□ -1.29
COL9A2-207ENST00000482722 M0QZ58 72 aa6.9□□□□□ -1.3
COL9A2-207ENST00000482722 A0A0A0MQY5 61 aa6.87□□□□□ -1.31
COL9A2-207ENST00000482722 MUC17Q685J3 4493 aa6.84□□□□□ -1.31
COL9A2-207ENST00000482722 KRTAP4-1Q9BYQ7 146 aa6.8□□□□□ -1.32
COL9A2-207ENST00000482722 PLAC4Q8WY50 150 aa6.78□□□□□ -1.32
COL9A2-207ENST00000482722 RNF213Q63HN8 5207 aa6.77□□□□□ -1.33
COL9A2-207ENST00000482722 R4GN34 69 aa6.73□□□□□ -1.33
COL9A2-207ENST00000482722 FAT4Q6V0I7 4981 aa6.73□□□□□ -1.33
COL9A2-207ENST00000482722 HMCN2Q8NDA2 5059 aa6.69□□□□□ -1.34
COL9A2-207ENST00000482722 UBR4Q5T4S7 5183 aa6.68□□□□□ -1.34
COL9A2-207ENST00000482722 LORP23490 312 aaPredicted RBP6.67□□□□□ -1.34
COL9A2-207ENST00000482722 LUZP6Q538Z0 58 aa6.67□□□□□ -1.34
COL9A2-207ENST00000482722 LCE2DQ5TA82 110 aaPredicted RBP6.67□□□□□ -1.34
COL9A2-207ENST00000482722 SEC61BP60468 96 aaKnown RBP6.64□□□□□ -1.35
COL9A2-207ENST00000482722 KRTAP19-2Q3LHN2 52 aa6.49□□□□□ -1.37
COL9A2-207ENST00000482722 PP632Q6XCG6 107 aa6.47□□□□□ -1.37
COL9A2-207ENST00000482722 FLGP20930 4061 aaPredicted RBP6.46□□□□□ -1.37
COL9A2-207ENST00000482722 CAMK2N1Q7Z7J9 78 aa6.45□□□□□ -1.38
COL9A2-207ENST00000482722 LCE2CQ5TA81 110 aa6.27□□□□□ -1.41
COL9A2-207ENST00000482722 SPRR5A0A1B0GTR4 108 aa6.21□□□□□ -1.41
COL9A2-207ENST00000482722 M0R2T5 61 aa6.21□□□□□ -1.41
COL9A2-207ENST00000482722 TNP1P09430 55 aa6.2□□□□□ -1.42
COL9A2-207ENST00000482722 KRTAP23-1A1A580 65 aa6.12□□□□□ -1.43
COL9A2-207ENST00000482722 MT1HP80294 61 aa6.11□□□□□ -1.43
COL9A2-207ENST00000482722 KRTAP10-10P60014 251 aa5.98□□□□□ -1.45
COL9A2-207ENST00000482722 LCE2AQ5TA79 106 aaPredicted RBP5.98□□□□□ -1.45
COL9A2-207ENST00000482722 MT1FP04733 61 aa5.97□□□□□ -1.45
COL9A2-207ENST00000482722 USH2AO75445 5202 aa5.95□□□□□ -1.46
COL9A2-207ENST00000482722 MT2AP02795 61 aa5.94□□□□□ -1.46
COL9A2-207ENST00000482722 KRTAP19-1Q8IUB9 90 aa5.94□□□□□ -1.46
COL9A2-207ENST00000482722 KRTAP9-8Q9BYQ0 159 aa5.93□□□□□ -1.46
COL9A2-207ENST00000482722 SPRR2GQ9BYE4 73 aa5.9□□□□□ -1.46
COL9A2-207ENST00000482722 LCE2BO14633 110 aa5.9□□□□□ -1.47
COL9A2-207ENST00000482722 PRO2289Q9P1D8 64 aa5.9□□□□□ -1.47
COL9A2-207ENST00000482722 LCE3AQ5TA76 89 aa5.87□□□□□ -1.47
COL9A2-207ENST00000482722 FSIP2Q5CZC0 6907 aa5.76□□□□□ -1.49
COL9A2-207ENST00000482722 INE1O15225 51 aa5.75□□□□□ -1.49
COL9A2-207ENST00000482722 KMT2DO14686 5537 aa5.68□□□□□ -1.5
COL9A2-207ENST00000482722 KRTAP9-3Q9BYQ3 159 aa5.67□□□□□ -1.5
COL9A2-207ENST00000482722 KRTAP8-1Q8IUC2 63 aa5.67□□□□□ -1.5
COL9A2-207ENST00000482722 MT1BP07438 61 aa5.66□□□□□ -1.5
COL9A2-207ENST00000482722 KRTAP19-8Q3LI54 63 aa5.6□□□□□ -1.51
COL9A2-207ENST00000482722 KRTAP10-5P60370 271 aa5.59□□□□□ -1.51
COL9A2-207ENST00000482722 MT1XP80297 61 aa5.58□□□□□ -1.52
COL9A2-207ENST00000482722 KRTAP12-3P60328 96 aa5.54□□□□□ -1.52
COL9A2-207ENST00000482722 KRTAP10-12P60413 245 aa5.52□□□□□ -1.53
COL9A2-207ENST00000482722 KRTAP10-7P60409 375 aaPredicted RBP5.5□□□□□ -1.53
COL9A2-207ENST00000482722 SSPOA2VEC9 5147 aa5.4□□□□□ -1.55
COL9A2-207ENST00000482722 KRTAP4-8A0A0G2JLE6 195 aa5.3□□□□□ -1.56
COL9A2-207ENST00000482722 KRTAP4-8Q9BYQ9 185 aa5.3□□□□□ -1.56
COL9A2-207ENST00000482722 KRTAP19-5Q3LI72 72 aa5.26□□□□□ -1.57
COL9A2-207ENST00000482722 LCE3CQ5T5A8 94 aa5.24□□□□□ -1.57
COL9A2-207ENST00000482722 KRTAP9-6A8MVA2 160 aa5.14□□□□□ -1.59
COL9A2-207ENST00000482722 FCGBPQ9Y6R7 5405 aaPredicted RBP5.09□□□□□ -1.59
COL9A2-207ENST00000482722 KRTAP4-7Q9BYR0 210 aa5.09□□□□□ -1.6
COL9A2-207ENST00000482722 MUC12Q9UKN1 5478 aa5.08□□□□□ -1.6
COL9A2-207ENST00000482722 KRTAP2-3P0C7H8 128 aa5.04□□□□□ -1.6
COL9A2-207ENST00000482722 KRTAP2-4Q9BYR9 128 aa5.04□□□□□ -1.6
COL9A2-207ENST00000482722 KRTAP2-1Q9BYU5 128 aa5.04□□□□□ -1.6
COL9A2-207ENST00000482722 KRTAP19-7Q3SYF9 63 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms