RNA–Protein interactions for RNA: ENST00000482098.1

LINC00888-203, long intergenic non-protein coding RNA 888, humanhuman

TSL 2

Gene LINC00888, Length 794 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00888-203ENST00000482098 MACF1Q9UPN3 7388 aaKnown RBP3.97□□□□□ -1.77
LINC00888-203ENST00000482098 SSPOA2VEC9 5147 aa3.96□□□□□ -1.78
LINC00888-203ENST00000482098 SYNE2Q8WXH0 6885 aaKnown RBP3.96□□□□□ -1.78
LINC00888-203ENST00000482098 KRTAP10-6P60371 365 aaPredicted RBP3.95□□□□□ -1.78
LINC00888-203ENST00000482098 KRTAP13-3Q3SY46 172 aa3.95□□□□□ -1.78
LINC00888-203ENST00000482098 USH2AO75445 5202 aa3.95□□□□□ -1.78
LINC00888-203ENST00000482098 KRTAP19-2Q3LHN2 52 aa3.94□□□□□ -1.78
LINC00888-203ENST00000482098 LCA10Q71F78 164 aa3.93□□□□□ -1.78
LINC00888-203ENST00000482098 Q96NJ1 140 aa3.93□□□□□ -1.78
LINC00888-203ENST00000482098 FCGBPQ9Y6R7 5405 aaPredicted RBP3.93□□□□□ -1.78
LINC00888-203ENST00000482098 HRES1P13985 223 aa3.92□□□□□ -1.78
LINC00888-203ENST00000482098 LINC00846Q9NV44 126 aa3.91□□□□□ -1.78
LINC00888-203ENST00000482098 NREPQ16612 68 aa3.9□□□□□ -1.79
LINC00888-203ENST00000482098 KTN1-AS1Q86SY8 53 aa3.9□□□□□ -1.79
LINC00888-203ENST00000482098 LINC00472Q9H8W2 130 aa3.9□□□□□ -1.79
LINC00888-203ENST00000482098 FLGP20930 4061 aaPredicted RBP3.89□□□□□ -1.79
LINC00888-203ENST00000482098 J3QR89 54 aa3.89□□□□□ -1.79
LINC00888-203ENST00000482098 IGKV4-1P06312 121 aa3.89□□□□□ -1.79
LINC00888-203ENST00000482098 ACYP1P07311 99 aa3.89□□□□□ -1.79
LINC00888-203ENST00000482098 UBL5Q9BZL1 73 aa3.89□□□□□ -1.79
LINC00888-203ENST00000482098 LINC01554Q52M75 96 aa3.87□□□□□ -1.79
LINC00888-203ENST00000482098 M0R2T5 61 aa3.85□□□□□ -1.79
LINC00888-203ENST00000482098 TRAV7A0A075B6U4 112 aa3.84□□□□□ -1.79
LINC00888-203ENST00000482098 K7EQZ3 153 aa3.84□□□□□ -1.79
LINC00888-203ENST00000482098 ATP5EP2Q5VTU8 51 aa3.84□□□□□ -1.79
LINC00888-203ENST00000482098 IGKV3D-7A0A0C4DH55 119 aa3.83□□□□□ -1.8
LINC00888-203ENST00000482098 C9orf92A6NGG3 77 aa3.83□□□□□ -1.8
LINC00888-203ENST00000482098 NDUFB1O75438 58 aa3.83□□□□□ -1.8
LINC00888-203ENST00000482098 LINC00643Q86TS7 51 aa3.82□□□□□ -1.8
LINC00888-203ENST00000482098 PRR15Q8IV56 129 aa3.82□□□□□ -1.8
LINC00888-203ENST00000482098 MMP24-AS1A0A0U1RRL7 71 aa3.8□□□□□ -1.8
LINC00888-203ENST00000482098 NEBP20929 6669 aa3.78□□□□□ -1.8
LINC00888-203ENST00000482098 HCG22E2RYF7 251 aa3.77□□□□□ -1.81
LINC00888-203ENST00000482098 PCOTHQ58A44 107 aa3.77□□□□□ -1.81
LINC00888-203ENST00000482098 TMEM254Q8TBM7 123 aa3.77□□□□□ -1.81
LINC00888-203ENST00000482098 hDV103S1A0JD37 113 aa3.76□□□□□ -1.81
LINC00888-203ENST00000482098 RPL37P61927 97 aaKnown RBP3.76□□□□□ -1.81
LINC00888-203ENST00000482098 CASC2Q6XLA1 102 aa3.76□□□□□ -1.81
LINC00888-203ENST00000482098 WFDC13Q8IUB5 93 aa3.76□□□□□ -1.81
LINC00888-203ENST00000482098 C20orf166-AS1Q96NR2 134 aa3.76□□□□□ -1.81
LINC00888-203ENST00000482098 MT-ATP8P03928 68 aa3.75□□□□□ -1.81
LINC00888-203ENST00000482098 TMEM258P61165 79 aa3.75□□□□□ -1.81
LINC00888-203ENST00000482098 COX6B2Q6YFQ2 88 aa3.75□□□□□ -1.81
LINC00888-203ENST00000482098 MRPL34Q9BQ48 92 aaKnown RBP3.75□□□□□ -1.81
LINC00888-203ENST00000482098 A0A087WVE0 104 aa3.74□□□□□ -1.81
LINC00888-203ENST00000482098 BRK1Q8WUW1 75 aa3.73□□□□□ -1.81
LINC00888-203ENST00000482098 KRTAP6-3Q3LI67 103 aa3.71□□□□□ -1.82
LINC00888-203ENST00000482098 ATP11AUNQ6ZP68 121 aa3.69□□□□□ -1.82
LINC00888-203ENST00000482098 ZCCHC13Q8WW36 166 aaKnown RBP3.69□□□□□ -1.82
LINC00888-203ENST00000482098 FAM236AA0A1B0GUQ0 79 aa3.68□□□□□ -1.82
LINC00888-203ENST00000482098 FAM236BA0A1B0GV22 79 aa3.68□□□□□ -1.82
LINC00888-203ENST00000482098 KRTAP10-5P60370 271 aa3.68□□□□□ -1.82
LINC00888-203ENST00000482098 TP53AIP1Q9HCN2 124 aa3.66□□□□□ -1.82
LINC00888-203ENST00000482098 MUC12Q9UKN1 5478 aa3.66□□□□□ -1.82
LINC00888-203ENST00000482098 KRTAP5-3Q6L8H2 238 aa3.65□□□□□ -1.83
LINC00888-203ENST00000482098 TRAV22A0A0B4J277 110 aa3.64□□□□□ -1.83
LINC00888-203ENST00000482098 UQCRQO14949 82 aa3.64□□□□□ -1.83
LINC00888-203ENST00000482098 KRTAP12-2P59991 146 aa3.64□□□□□ -1.83
LINC00888-203ENST00000482098 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
LINC00888-203ENST00000482098 PRO2289Q9P1D8 64 aa3.64□□□□□ -1.83
LINC00888-203ENST00000482098 CCDC179H3BU77 68 aa3.63□□□□□ -1.83
LINC00888-203ENST00000482098 KRTAP19-6Q3LI70 58 aa3.63□□□□□ -1.83
LINC00888-203ENST00000482098 ATOX1O00244 68 aa3.62□□□□□ -1.83
LINC00888-203ENST00000482098 P0C880 135 aa3.62□□□□□ -1.83
LINC00888-203ENST00000482098 H0Y9P7 68 aa3.61□□□□□ -1.83
LINC00888-203ENST00000482098 C7orf65Q6ZTY9 151 aa3.61□□□□□ -1.83
LINC00888-203ENST00000482098 SPRR5A0A1B0GTR4 108 aa3.6□□□□□ -1.83
LINC00888-203ENST00000482098 SPINK7P58062 85 aa3.6□□□□□ -1.83
LINC00888-203ENST00000482098 MT2AP02795 61 aa3.59□□□□□ -1.83
LINC00888-203ENST00000482098 KRTAP20-1Q3LI63 56 aa3.58□□□□□ -1.84
LINC00888-203ENST00000482098 LOC101927531A0A1B0GV80 90 aa3.57□□□□□ -1.84
LINC00888-203ENST00000482098 SERP2Q8N6R1 65 aa3.56□□□□□ -1.84
LINC00888-203ENST00000482098 LINC00208Q96KT6 92 aa3.56□□□□□ -1.84
LINC00888-203ENST00000482098 MT1FP04733 61 aa3.55□□□□□ -1.84
LINC00888-203ENST00000482098 CYP4F30PQ9H0H9 118 aa3.55□□□□□ -1.84
LINC00888-203ENST00000482098 KRTAP10-10P60014 251 aa3.54□□□□□ -1.84
LINC00888-203ENST00000482098 SERP1Q9Y6X1 66 aa3.52□□□□□ -1.85
LINC00888-203ENST00000482098 MDN1Q9NU22 5596 aa3.52□□□□□ -1.85
LINC00888-203ENST00000482098 COX7CP15954 63 aa3.51□□□□□ -1.85
LINC00888-203ENST00000482098 KLKP1Q107X0 134 aa3.51□□□□□ -1.85
LINC00888-203ENST00000482098 C20orf197Q8N268 126 aa3.51□□□□□ -1.85
LINC00888-203ENST00000482098 LCE1EQ5T753 118 aa3.5□□□□□ -1.85
LINC00888-203ENST00000482098 SNURFQ9Y675 71 aa3.5□□□□□ -1.85
LINC00888-203ENST00000482098 KMT2DO14686 5537 aa3.48□□□□□ -1.85
LINC00888-203ENST00000482098 ROMO1P60602 79 aa3.45□□□□□ -1.86
LINC00888-203ENST00000482098 H1FX-AS1Q4G0G2 97 aa3.45□□□□□ -1.86
LINC00888-203ENST00000482098 CYSTM1Q9H1C7 97 aa3.44□□□□□ -1.86
LINC00888-203ENST00000482098 H7BZZ5 65 aa3.42□□□□□ -1.86
LINC00888-203ENST00000482098 NDUFC1O43677 76 aa3.42□□□□□ -1.86
LINC00888-203ENST00000482098 KRTAP2-3P0C7H8 128 aa3.42□□□□□ -1.86
LINC00888-203ENST00000482098 Q1T7F1 81 aa3.42□□□□□ -1.86
LINC00888-203ENST00000482098 DMAC1Q96GE9 116 aa3.42□□□□□ -1.86
LINC00888-203ENST00000482098 KRTAP2-4Q9BYR9 128 aa3.42□□□□□ -1.86
LINC00888-203ENST00000482098 S4R3F8 94 aa3.41□□□□□ -1.86
LINC00888-203ENST00000482098 GPR98Q8WXG9 6306 aa3.39□□□□□ -1.87
LINC00888-203ENST00000482098 A6NN06 94 aa3.39□□□□□ -1.87
LINC00888-203ENST00000482098 KRTAP5-9P26371 169 aa3.39□□□□□ -1.87
LINC00888-203ENST00000482098 KRTAP10-7P60409 375 aaPredicted RBP3.39□□□□□ -1.87
LINC00888-203ENST00000482098 ATP5EP56381 51 aaPredicted RBP3.37□□□□□ -1.87
LINC00888-203ENST00000482098 ACYP2P14621 99 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms