RNA–Protein interactions for RNA: ENST00000481522.1

COPA-204, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-204ENST00000481522 SNCGO76070 127 aa-0.69□□□□□ -2.52
COPA-204ENST00000481522 PPP3R1P63098 170 aa-0.69□□□□□ -2.52
COPA-204ENST00000481522 MGPP08493 103 aa-0.7□□□□□ -2.52
COPA-204ENST00000481522 C3orf79P0CE67 100 aa-0.7□□□□□ -2.52
COPA-204ENST00000481522 CEBPZOSA8MTT3 80 aa-0.71□□□□□ -2.52
COPA-204ENST00000481522 K7ERU9 68 aa-0.71□□□□□ -2.52
COPA-204ENST00000481522 NDUFB6O95139 128 aa-0.71□□□□□ -2.52
COPA-204ENST00000481522 SIX6O95475 246 aa-0.71□□□□□ -2.52
COPA-204ENST00000481522 S100A7L2Q5SY68 101 aa-0.72□□□□□ -2.52
COPA-204ENST00000481522 SEC11CQ9BY50 192 aa-0.73□□□□□ -2.53
COPA-204ENST00000481522 ARPC4P59998 168 aa-0.74□□□□□ -2.53
COPA-204ENST00000481522 RPL39LQ96EH5 51 aaKnown RBP-0.74□□□□□ -2.53
COPA-204ENST00000481522 NMES1Q9C002 83 aa-0.74□□□□□ -2.53
COPA-204ENST00000481522 SSSCA1O60232 199 aa-0.75□□□□□ -2.53
COPA-204ENST00000481522 DR1Q01658 176 aa-0.75□□□□□ -2.53
COPA-204ENST00000481522 C10orf113Q5VZT2 155 aa-0.75□□□□□ -2.53
COPA-204ENST00000481522 KCNRGQ8N5I3 272 aa-0.75□□□□□ -2.53
COPA-204ENST00000481522 PPP1R17O96001 155 aa-0.76□□□□□ -2.53
COPA-204ENST00000481522 SMIM4Q8WVI0 70 aa-0.76□□□□□ -2.53
COPA-204ENST00000481522 ARPC5O15511 151 aa-0.77□□□□□ -2.53
COPA-204ENST00000481522 TP53AIP1Q9HCN2 124 aa-0.77□□□□□ -2.53
COPA-204ENST00000481522 PAIP2BQ9ULR5 123 aaKnown RBP-0.77□□□□□ -2.53
COPA-204ENST00000481522 C7orf77A4D0Y5 90 aa-0.78□□□□□ -2.53
COPA-204ENST00000481522 HIST1H1DP16402 221 aaKnown RBP-0.79□□□□□ -2.54
COPA-204ENST00000481522 RPS25P62851 125 aaKnown RBP-0.79□□□□□ -2.54
COPA-204ENST00000481522 SMIM2Q9BVW6 85 aa-0.79□□□□□ -2.54
COPA-204ENST00000481522 FAM107BQ9H098 131 aa-0.79□□□□□ -2.54
COPA-204ENST00000481522 FXYD6Q9H0Q3 95 aa-0.79□□□□□ -2.54
COPA-204ENST00000481522 PIGBOS1A0A0B4J2F0 54 aa-0.8□□□□□ -2.54
COPA-204ENST00000481522 CTXND1A0A1B0GTU2 59 aa-0.8□□□□□ -2.54
COPA-204ENST00000481522 HCG22E2RYF7 251 aa-0.8□□□□□ -2.54
COPA-204ENST00000481522 HMGN1P05114 100 aa-0.8□□□□□ -2.54
COPA-204ENST00000481522 FAM167A-AS1Q96KT0 104 aa-0.8□□□□□ -2.54
COPA-204ENST00000481522 CCDC167Q9P0B6 97 aa-0.8□□□□□ -2.54
COPA-204ENST00000481522 I3L3M4 83 aa-0.81□□□□□ -2.54
COPA-204ENST00000481522 TNP1P09430 55 aa-0.81□□□□□ -2.54
COPA-204ENST00000481522 TMEM191AQ9H0A3 160 aa-0.81□□□□□ -2.54
COPA-204ENST00000481522 TRAV13-2A0A0B4J235 113 aa-0.82□□□□□ -2.54
COPA-204ENST00000481522 NDUFC1O43677 76 aa-0.82□□□□□ -2.54
COPA-204ENST00000481522 SMIM11AP58511 58 aa-0.82□□□□□ -2.54
COPA-204ENST00000481522 SMCO1Q147U7 214 aa-0.82□□□□□ -2.54
COPA-204ENST00000481522 ANP32BQ92688 251 aaKnown RBP-0.82□□□□□ -2.54
COPA-204ENST00000481522 RPL39P62891 51 aaKnown RBP-0.83□□□□□ -2.54
COPA-204ENST00000481522 MGST2Q99735 147 aa-0.83□□□□□ -2.54
COPA-204ENST00000481522 TMEM170BQ5T4T1 132 aa-0.84□□□□□ -2.54
COPA-204ENST00000481522 CDKN2A-AS1Q9UH64 79 aa-0.84□□□□□ -2.54
COPA-204ENST00000481522 V9GYH0 126 aa-0.84□□□□□ -2.54
COPA-204ENST00000481522 POLR2KP53803 58 aaKnown RBP-0.85□□□□□ -2.55
COPA-204ENST00000481522 S100A12P80511 92 aa-0.85□□□□□ -2.55
COPA-204ENST00000481522 COX17Q14061 63 aa-0.85□□□□□ -2.55
COPA-204ENST00000481522 A0A087WXM4 84 aa-0.86□□□□□ -2.55
COPA-204ENST00000481522 Q6JHZ5 121 aa-0.86□□□□□ -2.55
COPA-204ENST00000481522 AP4S1Q9Y587 144 aa-0.86□□□□□ -2.55
COPA-204ENST00000481522 COPS9Q8WXC6 57 aa-0.87□□□□□ -2.55
COPA-204ENST00000481522 C12orf73Q69YU5 71 aa-0.89□□□□□ -2.55
COPA-204ENST00000481522 PFDN5Q99471 154 aa-0.89□□□□□ -2.55
COPA-204ENST00000481522 NXT2Q9NPJ8 142 aaKnown RBP-0.89□□□□□ -2.55
COPA-204ENST00000481522 H3BUT2 72 aa-0.9□□□□□ -2.55
COPA-204ENST00000481522 UQCR11O14957 56 aa-0.91□□□□□ -2.56
COPA-204ENST00000481522 GNG2P59768 71 aa-0.91□□□□□ -2.56
COPA-204ENST00000481522 UBE2L3P68036 154 aaKnown RBP-0.91□□□□□ -2.56
COPA-204ENST00000481522 BAGE2Q86Y30 109 aa-0.91□□□□□ -2.56
COPA-204ENST00000481522 ACBD7Q8N6N7 88 aa-0.91□□□□□ -2.56
COPA-204ENST00000481522 APOC3P02656 99 aa-0.92□□□□□ -2.56
COPA-204ENST00000481522 FCER1GP30273 86 aa-0.92□□□□□ -2.56
COPA-204ENST00000481522 Q8N8P6 123 aa-0.92□□□□□ -2.56
COPA-204ENST00000481522 PDCD5O14737 125 aa-0.93□□□□□ -2.56
COPA-204ENST00000481522 LINC00158P58513 81 aa-0.93□□□□□ -2.56
COPA-204ENST00000481522 ST20Q9HBF5 79 aa-0.93□□□□□ -2.56
COPA-204ENST00000481522 SERP1Q9Y6X1 66 aa-0.94□□□□□ -2.56
COPA-204ENST00000481522 SYS1-DBNDD2H3BUS1 97 aa-0.95□□□□□ -2.56
COPA-204ENST00000481522 CCDC58Q4VC31 144 aa-0.95□□□□□ -2.56
COPA-204ENST00000481522 MUSTN1Q8IVN3 82 aa-0.95□□□□□ -2.56
COPA-204ENST00000481522 COX7BP24311 80 aa-0.96□□□□□ -2.56
COPA-204ENST00000481522 LINC01558Q9Y6Z2 57 aa-0.96□□□□□ -2.56
COPA-204ENST00000481522 MMP24-AS1A0A0U1RRL7 71 aa-0.98□□□□□ -2.57
COPA-204ENST00000481522 LOC105371267A0A1B0GV96 52 aa-0.98□□□□□ -2.57
COPA-204ENST00000481522 SMIM13P0DJ93 91 aa-0.98□□□□□ -2.57
COPA-204ENST00000481522 COX8AP10176 69 aa-0.98□□□□□ -2.57
COPA-204ENST00000481522 CACFD1Q9UGQ2 172 aa-0.98□□□□□ -2.57
COPA-204ENST00000481522 TRBV7-4A0A0J9YYF1 115 aa-0.99□□□□□ -2.57
COPA-204ENST00000481522 PSENENQ9NZ42 101 aa-1□□□□□ -2.57
COPA-204ENST00000481522 FAM25AB3EWG3 89 aa-1.01□□□□□ -2.57
COPA-204ENST00000481522 FAM25CB3EWG5 89 aa-1.01□□□□□ -2.57
COPA-204ENST00000481522 FAM25GB3EWG6 89 aa-1.01□□□□□ -2.57
COPA-204ENST00000481522 IFI27P40305 119 aaPredicted RBP-1.01□□□□□ -2.57
COPA-204ENST00000481522 C2orf88Q9BSF0 95 aa-1.01□□□□□ -2.57
COPA-204ENST00000481522 SFT2D2O95562 160 aa-1.02□□□□□ -2.57
COPA-204ENST00000481522 MEIG1Q5JSS6 88 aa-1.02□□□□□ -2.57
COPA-204ENST00000481522 MRPL34Q9BQ48 92 aaKnown RBP-1.02□□□□□ -2.57
COPA-204ENST00000481522 UBE2L5PA0A1B0GUS4 154 aa-1.03□□□□□ -2.57
COPA-204ENST00000481522 SPANXDQ9BXN6 97 aa-1.03□□□□□ -2.57
COPA-204ENST00000481522 MRPS10P82664 201 aaKnown RBP-1.04□□□□□ -2.58
COPA-204ENST00000481522 MRPL54Q6P161 138 aaKnown RBP-1.04□□□□□ -2.58
COPA-204ENST00000481522 C8orf59Q8N0T1 100 aaPredicted RBP-1.05□□□□□ -2.58
COPA-204ENST00000481522 C9orf62Q8N4C0 152 aa-1.05□□□□□ -2.58
COPA-204ENST00000481522 SEC11AP67812 179 aa-1.07□□□□□ -2.58
COPA-204ENST00000481522 CHKB-CPT1BH3BT56 60 aa-1.09□□□□□ -2.58
COPA-204ENST00000481522 WHAMMP3Q1A5X7 153 aa-1.09□□□□□ -2.58
COPA-204ENST00000481522 UQCR10Q9UDW1 63 aa-1.1□□□□□ -2.59
Retrieved 100 of 20,778 RNA–protein pairs in 161 ms