RNA–Protein interactions for RNA: ENST00000481135.1

CUL3-209, Transcript of cullin 3, humanhuman

TSL 3

Gene CUL3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL3-209ENST00000481135 BOD1L1Q8NFC6 3051 aa0.54□□□□□ -2.32
CUL3-209ENST00000481135 CENPEQ02224 2701 aa0.54□□□□□ -2.32
CUL3-209ENST00000481135 TENM2Q9NT68 2774 aa0.54□□□□□ -2.32
CUL3-209ENST00000481135 DMBT1Q9UGM3 2413 aaPredicted RBP0.54□□□□□ -2.32
CUL3-209ENST00000481135 SPENQ96T58 3664 aaKnown RBP0.54□□□□□ -2.32
CUL3-209ENST00000481135 DMDP11532 3685 aa0.54□□□□□ -2.32
CUL3-209ENST00000481135 SPTBN5Q9NRC6 3674 aaKnown RBP0.54□□□□□ -2.32
CUL3-209ENST00000481135 LOC400499M0QZD8 3231 aa0.54□□□□□ -2.32
CUL3-209ENST00000481135 NBEAL2Q6ZNJ1 2754 aa0.53□□□□□ -2.32
CUL3-209ENST00000481135 AKAP9Q99996 3911 aa0.53□□□□□ -2.32
CUL3-209ENST00000481135 LRBAP50851 2863 aa0.53□□□□□ -2.32
CUL3-209ENST00000481135 SMG1Q96Q15 3661 aaKnown RBP0.53□□□□□ -2.32
CUL3-209ENST00000481135 ATMQ13315 3056 aa0.53□□□□□ -2.32
CUL3-209ENST00000481135 PTPN13Q12923 2485 aa0.53□□□□□ -2.32
CUL3-209ENST00000481135 CCDC168Q8NDH2 2452 aa0.53□□□□□ -2.32
CUL3-209ENST00000481135 CHD8Q9HCK8 2581 aa0.53□□□□□ -2.32
CUL3-209ENST00000481135 COL6A5A8TX70 2615 aa0.53□□□□□ -2.32
CUL3-209ENST00000481135 CRYBG3Q68DQ2 2970 aa0.53□□□□□ -2.33
CUL3-209ENST00000481135 MTORP42345 2549 aa0.53□□□□□ -2.33
CUL3-209ENST00000481135 USP9XQ93008 2570 aaPredicted RBP0.52□□□□□ -2.33
CUL3-209ENST00000481135 UTP20O75691 2785 aaKnown RBP0.52□□□□□ -2.33
CUL3-209ENST00000481135 TGP01266 2768 aa0.52□□□□□ -2.33
CUL3-209ENST00000481135 NF1P21359 2839 aa0.52□□□□□ -2.33
CUL3-209ENST00000481135 NBPF19A0A087WUL8 3843 aa0.52□□□□□ -2.33
CUL3-209ENST00000481135 DCHS2Q6V1P9 2916 aa0.52□□□□□ -2.33
CUL3-209ENST00000481135 MYO15AQ9UKN7 3530 aa0.52□□□□□ -2.33
CUL3-209ENST00000481135 MYO18BQ8IUG5 2567 aa0.51□□□□□ -2.33
CUL3-209ENST00000481135 UBR5O95071 2799 aaPredicted RBP0.51□□□□□ -2.33
CUL3-209ENST00000481135 NIPBLQ6KC79 2804 aaeCLIP0.51□□□□□ -2.33
CUL3-209ENST00000481135 ASPMQ8IZT6 3477 aa0.51□□□□□ -2.33
CUL3-209ENST00000481135 FAT4Q6V0I7 4981 aa0.51□□□□□ -2.33
CUL3-209ENST00000481135 PDZD2O15018 2839 aa0.51□□□□□ -2.33
CUL3-209ENST00000481135 EYSQ5T1H1 3165 aa0.51□□□□□ -2.33
CUL3-209ENST00000481135 KRTAP8-1Q8IUC2 63 aa0.51□□□□□ -2.33
CUL3-209ENST00000481135 GPR98Q8WXG9 6306 aa0.51□□□□□ -2.33
CUL3-209ENST00000481135 TEX15Q9BXT5 2789 aa0.51□□□□□ -2.33
CUL3-209ENST00000481135 UNC79Q9P2D8 2635 aa0.51□□□□□ -2.33
CUL3-209ENST00000481135 SRRM2Q9UQ35 2752 aaKnown RBP0.51□□□□□ -2.33
CUL3-209ENST00000481135 COL7A1Q02388 2944 aa0.51□□□□□ -2.33
CUL3-209ENST00000481135 CFAP46Q8IYW2 2715 aa0.51□□□□□ -2.33
CUL3-209ENST00000481135 GCN1Q92616 2671 aaKnown RBP0.51□□□□□ -2.33
CUL3-209ENST00000481135 STAB2Q8WWQ8 2551 aa0.51□□□□□ -2.33
CUL3-209ENST00000481135 OTOGQ6ZRI0 2925 aa0.5□□□□□ -2.33
CUL3-209ENST00000481135 TENM4Q6N022 2769 aa0.5□□□□□ -2.33
CUL3-209ENST00000481135 USP9YO00507 2555 aaPredicted RBP0.5□□□□□ -2.33
CUL3-209ENST00000481135 FASNP49327 2511 aaKnown RBP0.5□□□□□ -2.33
CUL3-209ENST00000481135 SVEP1Q4LDE5 3571 aa0.5□□□□□ -2.33
CUL3-209ENST00000481135 ANKRD11Q6UB99 2663 aaPredicted RBP0.5□□□□□ -2.33
CUL3-209ENST00000481135 EPG5Q9HCE0 2579 aa0.5□□□□□ -2.33
CUL3-209ENST00000481135 ACACBO00763 2458 aa0.49□□□□□ -2.33
CUL3-209ENST00000481135 LAMA5O15230 3695 aa0.49□□□□□ -2.33
CUL3-209ENST00000481135 RELNP78509 3460 aa0.49□□□□□ -2.33
CUL3-209ENST00000481135 NBEAL1Q6ZS30 2694 aa0.49□□□□□ -2.33
CUL3-209ENST00000481135 SETXQ7Z333 2677 aaKnown RBP0.49□□□□□ -2.33
CUL3-209ENST00000481135 CEP295Q9C0D2 2601 aa0.49□□□□□ -2.33
CUL3-209ENST00000481135 HECTD1Q9ULT8 2610 aa0.49□□□□□ -2.33
CUL3-209ENST00000481135 CACNA1AO00555 2505 aa0.49□□□□□ -2.33
CUL3-209ENST00000481135 VPS13DQ5THJ4 4388 aa0.49□□□□□ -2.33
CUL3-209ENST00000481135 HRNRQ86YZ3 2850 aaPredicted RBP0.48□□□□□ -2.33
CUL3-209ENST00000481135 MAST4O15021 2626 aa0.48□□□□□ -2.33
CUL3-209ENST00000481135 SPRR2GQ9BYE4 73 aa0.48□□□□□ -2.33
CUL3-209ENST00000481135 CSMD2Q7Z408 3487 aa0.48□□□□□ -2.33
CUL3-209ENST00000481135 VPS13CQ709C8 3753 aa0.48□□□□□ -2.33
CUL3-209ENST00000481135 MGAM2Q2M2H8 2515 aa0.47□□□□□ -2.33
CUL3-209ENST00000481135 TRRAPQ9Y4A5 3859 aa0.47□□□□□ -2.33
CUL3-209ENST00000481135 MUC3AQ02505 3323 aa0.47□□□□□ -2.33
CUL3-209ENST00000481135 SETD2Q9BYW2 2564 aaPredicted RBP0.47□□□□□ -2.33
CUL3-209ENST00000481135 BSNQ9UPA5 3926 aa0.47□□□□□ -2.33
CUL3-209ENST00000481135 DNAH8Q96JB1 4490 aa0.47□□□□□ -2.33
CUL3-209ENST00000481135 VWFP04275 2813 aa0.46□□□□□ -2.34
CUL3-209ENST00000481135 MXRA5Q9NR99 2828 aa0.46□□□□□ -2.34
CUL3-209ENST00000481135 CUBNO60494 3623 aa0.46□□□□□ -2.34
CUL3-209ENST00000481135 DNAH3Q8TD57 4116 aa0.46□□□□□ -2.34
CUL3-209ENST00000481135 CMYA5Q8N3K9 4069 aa0.46□□□□□ -2.34
CUL3-209ENST00000481135 ITPR3Q14573 2671 aa0.46□□□□□ -2.34
CUL3-209ENST00000481135 DNAH1Q9P2D7 4330 aa0.46□□□□□ -2.34
CUL3-209ENST00000481135 MYCBP2O75592 4640 aa0.45□□□□□ -2.34
CUL3-209ENST00000481135 HIVEP1P15822 2718 aa0.45□□□□□ -2.34
CUL3-209ENST00000481135 TEP1Q99973 2627 aaKnown RBP0.45□□□□□ -2.34
CUL3-209ENST00000481135 STAB1Q9NY15 2570 aa0.45□□□□□ -2.34
CUL3-209ENST00000481135 DNAH10Q8IVF4 4471 aa0.45□□□□□ -2.34
CUL3-209ENST00000481135 DNAH17Q9UFH2 4485 aa0.45□□□□□ -2.34
CUL3-209ENST00000481135 MT1HL1P0DM35 61 aa0.45□□□□□ -2.34
CUL3-209ENST00000481135 ATRQ13535 2644 aa0.45□□□□□ -2.34
CUL3-209ENST00000481135 DNAH9Q9NYC9 4486 aa0.44□□□□□ -2.34
CUL3-209ENST00000481135 MDN1Q9NU22 5596 aa0.44□□□□□ -2.34
CUL3-209ENST00000481135 FLNAP21333 2647 aaKnown RBP0.44□□□□□ -2.34
CUL3-209ENST00000481135 MUC5ACP98088 5654 aa0.44□□□□□ -2.34
CUL3-209ENST00000481135 PRM1P04553 51 aa0.44□□□□□ -2.34
CUL3-209ENST00000481135 ITPR2Q14571 2701 aa0.44□□□□□ -2.34
CUL3-209ENST00000481135 NSD1Q96L73 2696 aaPredicted RBP0.44□□□□□ -2.34
CUL3-209ENST00000481135 ANK3Q12955 4377 aaKnown RBP0.44□□□□□ -2.34
CUL3-209ENST00000481135 HUWE1Q7Z6Z7 4374 aaKnown RBP0.44□□□□□ -2.34
CUL3-209ENST00000481135 DNAH11Q96DT5 4516 aa0.43□□□□□ -2.34
CUL3-209ENST00000481135 LYSTQ99698 3801 aa0.43□□□□□ -2.34
CUL3-209ENST00000481135 FLNBO75369 2602 aaKnown RBP0.43□□□□□ -2.34
CUL3-209ENST00000481135 DNAH6Q9C0G6 4158 aa0.43□□□□□ -2.34
CUL3-209ENST00000481135 KRTAP19-8Q3LI54 63 aa0.43□□□□□ -2.34
CUL3-209ENST00000481135 KRTAP19-5Q3LI72 72 aa0.43□□□□□ -2.34
CUL3-209ENST00000481135 DNAH2Q9P225 4427 aa0.43□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms