RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 Q5VV11 94 aa6.89□□□□□ -1.31
LIMS3-203ENST00000480744 CYP4F30PQ9H0H9 118 aa6.89□□□□□ -1.31
LIMS3-203ENST00000480744 UQCRQO14949 82 aa6.88□□□□□ -1.31
LIMS3-203ENST00000480744 H0Y9P7 68 aa6.87□□□□□ -1.31
LIMS3-203ENST00000480744 MT1BP07438 61 aa6.87□□□□□ -1.31
LIMS3-203ENST00000480744 OCR1Q9BZK8 76 aa6.86□□□□□ -1.31
LIMS3-203ENST00000480744 LOC101927531A0A1B0GV80 90 aa6.85□□□□□ -1.31
LIMS3-203ENST00000480744 K7ERU9 68 aa6.83□□□□□ -1.32
LIMS3-203ENST00000480744 MT-ATP8P03928 68 aa6.83□□□□□ -1.32
LIMS3-203ENST00000480744 SPRR2GQ9BYE4 73 aa6.83□□□□□ -1.32
LIMS3-203ENST00000480744 KRTAP19-8Q3LI54 63 aa6.82□□□□□ -1.32
LIMS3-203ENST00000480744 ATOX1O00244 68 aa6.8□□□□□ -1.32
LIMS3-203ENST00000480744 NEBP20929 6669 aa6.8□□□□□ -1.32
LIMS3-203ENST00000480744 KLKP1Q107X0 134 aa6.79□□□□□ -1.32
LIMS3-203ENST00000480744 LINC00208Q96KT6 92 aa6.77□□□□□ -1.33
LIMS3-203ENST00000480744 MUC12Q9UKN1 5478 aa6.75□□□□□ -1.33
LIMS3-203ENST00000480744 KRTAP10-5P60370 271 aa6.75□□□□□ -1.33
LIMS3-203ENST00000480744 IMUPQ9GZP8 106 aa6.74□□□□□ -1.33
LIMS3-203ENST00000480744 SCGB1A1P11684 91 aa6.71□□□□□ -1.34
LIMS3-203ENST00000480744 MP68P56378 58 aa6.7□□□□□ -1.34
LIMS3-203ENST00000480744 CRIPTQ9P021 101 aa6.67□□□□□ -1.34
LIMS3-203ENST00000480744 H3BPC8 53 aa6.65□□□□□ -1.34
LIMS3-203ENST00000480744 TRAV7A0A075B6U4 112 aa6.61□□□□□ -1.35
LIMS3-203ENST00000480744 NDUFC1O43677 76 aa6.6□□□□□ -1.35
LIMS3-203ENST00000480744 A8MUN3 132 aa6.59□□□□□ -1.35
LIMS3-203ENST00000480744 KRTAP5-9P26371 169 aa6.59□□□□□ -1.35
LIMS3-203ENST00000480744 KRTAP20-1Q3LI63 56 aa6.59□□□□□ -1.35
LIMS3-203ENST00000480744 KRTAP4-8Q9BYQ9 185 aa6.59□□□□□ -1.35
LIMS3-203ENST00000480744 KMT2DO14686 5537 aa6.56□□□□□ -1.36
LIMS3-203ENST00000480744 SMIM20Q8N5G0 67 aa6.56□□□□□ -1.36
LIMS3-203ENST00000480744 MDN1Q9NU22 5596 aa6.55□□□□□ -1.36
LIMS3-203ENST00000480744 H0YAA0 97 aa6.54□□□□□ -1.36
LIMS3-203ENST00000480744 DMAC1Q96GE9 116 aa6.54□□□□□ -1.36
LIMS3-203ENST00000480744 ADM2Q7Z4H4 148 aa6.53□□□□□ -1.36
LIMS3-203ENST00000480744 SNURFQ9Y675 71 aa6.49□□□□□ -1.37
LIMS3-203ENST00000480744 SERP2Q8N6R1 65 aa6.46□□□□□ -1.38
LIMS3-203ENST00000480744 PRO2289Q9P1D8 64 aa6.45□□□□□ -1.38
LIMS3-203ENST00000480744 C20orf197Q8N268 126 aa6.43□□□□□ -1.38
LIMS3-203ENST00000480744 PLAC4Q8WY50 150 aa6.42□□□□□ -1.38
LIMS3-203ENST00000480744 SPRR2FQ96RM1 72 aa6.41□□□□□ -1.38
LIMS3-203ENST00000480744 MT1XP80297 61 aa6.4□□□□□ -1.38
LIMS3-203ENST00000480744 SPRR2EP22531 72 aa6.37□□□□□ -1.39
LIMS3-203ENST00000480744 SPRR2BP35325 72 aa6.37□□□□□ -1.39
LIMS3-203ENST00000480744 SPRR2AP35326 72 aa6.37□□□□□ -1.39
LIMS3-203ENST00000480744 R4GN34 69 aa6.37□□□□□ -1.39
LIMS3-203ENST00000480744 KRTAP2-3P0C7H8 128 aa6.36□□□□□ -1.39
LIMS3-203ENST00000480744 KRTAP2-4Q9BYR9 128 aa6.36□□□□□ -1.39
LIMS3-203ENST00000480744 ACYP2P14621 99 aa6.35□□□□□ -1.39
LIMS3-203ENST00000480744 P0C880 135 aa6.34□□□□□ -1.39
LIMS3-203ENST00000480744 KRTAP8-1Q8IUC2 63 aa6.34□□□□□ -1.39
LIMS3-203ENST00000480744 M0QZ58 72 aa6.33□□□□□ -1.4
LIMS3-203ENST00000480744 SPANXA2-OT1Q8N9U9 137 aa6.33□□□□□ -1.4
LIMS3-203ENST00000480744 COX7CP15954 63 aa6.32□□□□□ -1.4
LIMS3-203ENST00000480744 CYSTM1Q9H1C7 97 aa6.31□□□□□ -1.4
LIMS3-203ENST00000480744 LCE3BQ5TA77 95 aa6.3□□□□□ -1.4
LIMS3-203ENST00000480744 LINC01554Q52M75 96 aa6.27□□□□□ -1.41
LIMS3-203ENST00000480744 KRTAP12-2P59991 146 aa6.26□□□□□ -1.41
LIMS3-203ENST00000480744 KRTAP4-12Q9BQ66 201 aa6.24□□□□□ -1.41
LIMS3-203ENST00000480744 CHKB-CPT1BH3BT56 60 aa6.23□□□□□ -1.41
LIMS3-203ENST00000480744 H7BZZ5 65 aa6.22□□□□□ -1.41
LIMS3-203ENST00000480744 LCE1AQ5T7P2 110 aa6.22□□□□□ -1.41
LIMS3-203ENST00000480744 KRTAP4-8A0A0G2JLE6 195 aa6.2□□□□□ -1.42
LIMS3-203ENST00000480744 SPTSSBQ8NFR3 76 aa6.19□□□□□ -1.42
LIMS3-203ENST00000480744 ANAPC13Q9BS18 74 aa6.19□□□□□ -1.42
LIMS3-203ENST00000480744 COA5Q86WW8 74 aa6.17□□□□□ -1.42
LIMS3-203ENST00000480744 SPRR2DP22532 72 aa6.16□□□□□ -1.42
LIMS3-203ENST00000480744 KRTAP2-2Q9BYT5 123 aa6.14□□□□□ -1.43
LIMS3-203ENST00000480744 KRTAP2-1Q9BYU5 128 aa6.14□□□□□ -1.43
LIMS3-203ENST00000480744 CCDC179H3BU77 68 aa6.13□□□□□ -1.43
LIMS3-203ENST00000480744 KRTAP10-7P60409 375 aaPredicted RBP6.12□□□□□ -1.43
LIMS3-203ENST00000480744 KRTAP9-9Q9BYP9 154 aa6.12□□□□□ -1.43
LIMS3-203ENST00000480744 KRTAP9-4Q9BYQ2 154 aa6.12□□□□□ -1.43
LIMS3-203ENST00000480744 KRTAP10-12P60413 245 aa6.07□□□□□ -1.44
LIMS3-203ENST00000480744 KRTAP13-4Q3LI77 160 aa6.03□□□□□ -1.44
LIMS3-203ENST00000480744 ATP5EP56381 51 aaPredicted RBP5.9□□□□□ -1.46
LIMS3-203ENST00000480744 SEC61GP60059 68 aa5.88□□□□□ -1.47
LIMS3-203ENST00000480744 LCE1DQ5T752 114 aa5.88□□□□□ -1.47
LIMS3-203ENST00000480744 KRTAP4-7Q9BYR0 210 aa5.88□□□□□ -1.47
LIMS3-203ENST00000480744 SERP1Q9Y6X1 66 aa5.88□□□□□ -1.47
LIMS3-203ENST00000480744 CAMK2N1Q7Z7J9 78 aa5.86□□□□□ -1.47
LIMS3-203ENST00000480744 SPATA8Q6RVD6 105 aa5.85□□□□□ -1.47
LIMS3-203ENST00000480744 TMEM258P61165 79 aa5.84□□□□□ -1.47
LIMS3-203ENST00000480744 A0A1B0GU33 70 aa5.83□□□□□ -1.48
LIMS3-203ENST00000480744 A0A1B0GU69 56 aa5.8□□□□□ -1.48
LIMS3-203ENST00000480744 A0A0D9SG42 100 aa5.79□□□□□ -1.48
LIMS3-203ENST00000480744 KRTAP19-7Q3SYF9 63 aa5.72□□□□□ -1.49
LIMS3-203ENST00000480744 KRTAP4-9Q9BYQ8 210 aa5.72□□□□□ -1.49
LIMS3-203ENST00000480744 KRTAP12-1P59990 96 aa5.71□□□□□ -1.5
LIMS3-203ENST00000480744 LINC01558Q9Y6Z2 57 aa5.71□□□□□ -1.5
LIMS3-203ENST00000480744 DSTQ03001 7570 aaKnown RBP5.69□□□□□ -1.5
LIMS3-203ENST00000480744 A8MU10 97 aa5.69□□□□□ -1.5
LIMS3-203ENST00000480744 MT1EP04732 61 aa5.69□□□□□ -1.5
LIMS3-203ENST00000480744 LCE5AQ5TCM9 118 aa5.69□□□□□ -1.5
LIMS3-203ENST00000480744 GPR98Q8WXG9 6306 aa5.68□□□□□ -1.5
LIMS3-203ENST00000480744 KRTAP19-3Q7Z4W3 81 aa5.68□□□□□ -1.5
LIMS3-203ENST00000480744 SPINT4Q6UDR6 99 aa5.66□□□□□ -1.5
LIMS3-203ENST00000480744 PRR15LQ9BU68 103 aa5.64□□□□□ -1.51
LIMS3-203ENST00000480744 SMIM26A0A096LP01 95 aa5.62□□□□□ -1.51
LIMS3-203ENST00000480744 KRTAP4-2Q9BYR5 136 aa5.61□□□□□ -1.51
LIMS3-203ENST00000480744 KRTAP19-5Q3LI72 72 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms