RNA–Protein interactions for RNA: ENST00000480549.5

SH3D21-203, Transcript of SH3 domain containing 21, humanhuman

TSL 2

Gene SH3D21, Length 3,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D21-203ENST00000480549 Q8N1X5 172 aa9.18□□□□□ -0.94
SH3D21-203ENST00000480549 KIAA1109Q2LD37 5005 aa9.17□□□□□ -0.94
SH3D21-203ENST00000480549 IGKV2D-30A0A075B6S6 120 aa9.16□□□□□ -0.94
SH3D21-203ENST00000480549 EPPK1P58107 5090 aaKnown RBP9.15□□□□□ -0.94
SH3D21-203ENST00000480549 H0YAA0 97 aa9.14□□□□□ -0.95
SH3D21-203ENST00000480549 C9orf92A6NGG3 77 aa9.14□□□□□ -0.95
SH3D21-203ENST00000480549 C20orf166-AS1Q96NR2 134 aa9.1□□□□□ -0.95
SH3D21-203ENST00000480549 A0A0A0MQY5 61 aa9.07□□□□□ -0.96
SH3D21-203ENST00000480549 SPINT4Q6UDR6 99 aa9.06□□□□□ -0.96
SH3D21-203ENST00000480549 NDUFAF8A1L188 74 aa9.03□□□□□ -0.96
SH3D21-203ENST00000480549 MYCBP2O75592 4640 aa9.03□□□□□ -0.96
SH3D21-203ENST00000480549 MT1HL1P0DM35 61 aa9□□□□□ -0.97
SH3D21-203ENST00000480549 A0A1B0GU33 70 aa8.97□□□□□ -0.97
SH3D21-203ENST00000480549 DMBT1Q9UGM3 2413 aaPredicted RBP8.91□□□□□ -0.98
SH3D21-203ENST00000480549 K7ERS5 55 aa8.9□□□□□ -0.98
SH3D21-203ENST00000480549 H1FX-AS1Q4G0G2 97 aa8.87□□□□□ -0.99
SH3D21-203ENST00000480549 KRTAP4-5Q9BYR2 181 aa8.85□□□□□ -0.99
SH3D21-203ENST00000480549 XP32Q5T750 250 aa8.83□□□□□ -1
SH3D21-203ENST00000480549 RPL37P61927 97 aaKnown RBP8.81□□□□□ -1
SH3D21-203ENST00000480549 TPRXLQ17RH7 258 aa8.79□□□□□ -1
SH3D21-203ENST00000480549 KRTAP3-1Q9BYR8 98 aa8.77□□□□□ -1
SH3D21-203ENST00000480549 KRTAP15-1Q3LI76 137 aa8.76□□□□□ -1.01
SH3D21-203ENST00000480549 C10orf95Q9H7T3 257 aa8.75□□□□□ -1.01
SH3D21-203ENST00000480549 ABCA13Q86UQ4 5058 aa8.71□□□□□ -1.02
SH3D21-203ENST00000480549 COX6B2Q6YFQ2 88 aa8.67□□□□□ -1.02
SH3D21-203ENST00000480549 LPAP08519 4548 aa8.63□□□□□ -1.03
SH3D21-203ENST00000480549 LRP2P98164 4655 aa8.62□□□□□ -1.03
SH3D21-203ENST00000480549 HERC2O95714 4834 aa8.62□□□□□ -1.03
SH3D21-203ENST00000480549 BIRC6Q9NR09 4857 aa8.62□□□□□ -1.03
SH3D21-203ENST00000480549 A0A0D9SG42 100 aa8.61□□□□□ -1.03
SH3D21-203ENST00000480549 LUZP6Q538Z0 58 aa8.52□□□□□ -1.05
SH3D21-203ENST00000480549 J3QL48 77 aa8.49□□□□□ -1.05
SH3D21-203ENST00000480549 KRTAP3-3Q9BYR6 98 aa8.44□□□□□ -1.06
SH3D21-203ENST00000480549 KRTAP13-4Q3LI77 160 aa8.43□□□□□ -1.06
SH3D21-203ENST00000480549 S4R3F8 94 aa8.37□□□□□ -1.07
SH3D21-203ENST00000480549 MUC17Q685J3 4493 aa8.34□□□□□ -1.07
SH3D21-203ENST00000480549 SEC61BP60468 96 aaKnown RBP8.32□□□□□ -1.08
SH3D21-203ENST00000480549 KRTAP10-6P60371 365 aaPredicted RBP8.31□□□□□ -1.08
SH3D21-203ENST00000480549 PCLOQ9Y6V0 5065 aa8.26□□□□□ -1.09
SH3D21-203ENST00000480549 KRTAP4-1Q9BYQ7 146 aa8.26□□□□□ -1.09
SH3D21-203ENST00000480549 KRTAP12-2P59991 146 aa8.24□□□□□ -1.09
SH3D21-203ENST00000480549 KRTAP3-2Q9BYR7 98 aa8.22□□□□□ -1.09
SH3D21-203ENST00000480549 HERC1Q15751 4861 aa8.17□□□□□ -1.1
SH3D21-203ENST00000480549 HMCN2Q8NDA2 5059 aa8.13□□□□□ -1.11
SH3D21-203ENST00000480549 KRTAP19-2Q3LHN2 52 aa8.1□□□□□ -1.11
SH3D21-203ENST00000480549 KRTAP12-1P59990 96 aa8.06□□□□□ -1.12
SH3D21-203ENST00000480549 PLAC4Q8WY50 150 aa8.04□□□□□ -1.12
SH3D21-203ENST00000480549 MUC2Q02817 5179 aa8.01□□□□□ -1.13
SH3D21-203ENST00000480549 FLGP20930 4061 aaPredicted RBP7.9□□□□□ -1.15
SH3D21-203ENST00000480549 M0QZ58 72 aa7.84□□□□□ -1.15
SH3D21-203ENST00000480549 LORP23490 312 aaPredicted RBP7.77□□□□□ -1.17
SH3D21-203ENST00000480549 LCE2CQ5TA81 110 aa7.76□□□□□ -1.17
SH3D21-203ENST00000480549 R4GN34 69 aa7.72□□□□□ -1.17
SH3D21-203ENST00000480549 RNF213Q63HN8 5207 aa7.71□□□□□ -1.17
SH3D21-203ENST00000480549 UBR4Q5T4S7 5183 aa7.71□□□□□ -1.17
SH3D21-203ENST00000480549 FAT4Q6V0I7 4981 aa7.66□□□□□ -1.18
SH3D21-203ENST00000480549 MT1HP80294 61 aa7.55□□□□□ -1.2
SH3D21-203ENST00000480549 M0R2T5 61 aa7.45□□□□□ -1.22
SH3D21-203ENST00000480549 CAMK2N1Q7Z7J9 78 aa7.42□□□□□ -1.22
SH3D21-203ENST00000480549 PP632Q6XCG6 107 aa7.38□□□□□ -1.23
SH3D21-203ENST00000480549 KRTAP9-8Q9BYQ0 159 aa7.34□□□□□ -1.23
SH3D21-203ENST00000480549 MT2AP02795 61 aa7.33□□□□□ -1.24
SH3D21-203ENST00000480549 SPRR2GQ9BYE4 73 aa7.33□□□□□ -1.24
SH3D21-203ENST00000480549 MT1FP04733 61 aa7.32□□□□□ -1.24
SH3D21-203ENST00000480549 PRO2289Q9P1D8 64 aa7.32□□□□□ -1.24
SH3D21-203ENST00000480549 KRTAP19-1Q8IUB9 90 aa7.31□□□□□ -1.24
SH3D21-203ENST00000480549 KRTAP10-10P60014 251 aa7.25□□□□□ -1.25
SH3D21-203ENST00000480549 SPRR5A0A1B0GTR4 108 aa7.16□□□□□ -1.26
SH3D21-203ENST00000480549 KRTAP19-8Q3LI54 63 aa7.08□□□□□ -1.28
SH3D21-203ENST00000480549 KRTAP9-3Q9BYQ3 159 aa7.05□□□□□ -1.28
SH3D21-203ENST00000480549 LCE2AQ5TA79 106 aaPredicted RBP7.02□□□□□ -1.29
SH3D21-203ENST00000480549 MT1BP07438 61 aa7□□□□□ -1.29
SH3D21-203ENST00000480549 INE1O15225 51 aa6.99□□□□□ -1.29
SH3D21-203ENST00000480549 TNP1P09430 55 aa6.98□□□□□ -1.29
SH3D21-203ENST00000480549 KRTAP10-5P60370 271 aa6.85□□□□□ -1.31
SH3D21-203ENST00000480549 MT1XP80297 61 aa6.85□□□□□ -1.31
SH3D21-203ENST00000480549 KRTAP23-1A1A580 65 aa6.83□□□□□ -1.32
SH3D21-203ENST00000480549 LCE2BO14633 110 aa6.82□□□□□ -1.32
SH3D21-203ENST00000480549 LCE3AQ5TA76 89 aa6.68□□□□□ -1.34
SH3D21-203ENST00000480549 USH2AO75445 5202 aa6.61□□□□□ -1.35
SH3D21-203ENST00000480549 KRTAP10-7P60409 375 aaPredicted RBP6.61□□□□□ -1.35
SH3D21-203ENST00000480549 KRTAP10-12P60413 245 aa6.56□□□□□ -1.36
SH3D21-203ENST00000480549 KRTAP8-1Q8IUC2 63 aa6.53□□□□□ -1.36
SH3D21-203ENST00000480549 SSPOA2VEC9 5147 aa6.39□□□□□ -1.39
SH3D21-203ENST00000480549 KRTAP12-3P60328 96 aa6.37□□□□□ -1.39
SH3D21-203ENST00000480549 KMT2DO14686 5537 aa6.3□□□□□ -1.4
SH3D21-203ENST00000480549 KRTAP4-8A0A0G2JLE6 195 aa6.28□□□□□ -1.4
SH3D21-203ENST00000480549 KRTAP4-8Q9BYQ9 185 aa6.28□□□□□ -1.4
SH3D21-203ENST00000480549 KRTAP19-6Q3LI70 58 aa6.27□□□□□ -1.41
SH3D21-203ENST00000480549 KRTAP19-5Q3LI72 72 aa6.25□□□□□ -1.41
SH3D21-203ENST00000480549 LCE2DQ5TA82 110 aaPredicted RBP6.2□□□□□ -1.42
SH3D21-203ENST00000480549 KRTAP9-2Q9BYQ4 174 aa6.19□□□□□ -1.42
SH3D21-203ENST00000480549 FSIP2Q5CZC0 6907 aa6.18□□□□□ -1.42
SH3D21-203ENST00000480549 KRTAP9-6A0A140TA67 174 aa6.16□□□□□ -1.42
SH3D21-203ENST00000480549 KRTAP19-7Q3SYF9 63 aa6.11□□□□□ -1.43
SH3D21-203ENST00000480549 FCGBPQ9Y6R7 5405 aaPredicted RBP5.99□□□□□ -1.45
SH3D21-203ENST00000480549 LCE3CQ5T5A8 94 aa5.98□□□□□ -1.45
SH3D21-203ENST00000480549 MT1EP04732 61 aa5.96□□□□□ -1.46
SH3D21-203ENST00000480549 MT1LQ93083 61 aa5.89□□□□□ -1.47
SH3D21-203ENST00000480549 KRTAP19-4Q3LI73 84 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms