RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 S4R3F8 94 aa5.48□□□□□ -1.53
SIK3-210ENST00000480468 KRTAP21-3Q3LHN1 58 aa5.47□□□□□ -1.53
SIK3-210ENST00000480468 PKHD1L1Q86WI1 4243 aa5.45□□□□□ -1.54
SIK3-210ENST00000480468 FAT2Q9NYQ8 4349 aa5.42□□□□□ -1.54
SIK3-210ENST00000480468 XP32Q5T750 250 aa5.42□□□□□ -1.54
SIK3-210ENST00000480468 KRTAP12-2P59991 146 aa5.41□□□□□ -1.54
SIK3-210ENST00000480468 DMBT1Q9UGM3 2413 aaPredicted RBP5.38□□□□□ -1.55
SIK3-210ENST00000480468 KRTAP12-1P59990 96 aa5.38□□□□□ -1.55
SIK3-210ENST00000480468 PKHD1P08F94 4074 aa5.34□□□□□ -1.55
SIK3-210ENST00000480468 A0A0A0MQY5 61 aa5.33□□□□□ -1.56
SIK3-210ENST00000480468 APOBP04114 4563 aaKnown RBP5.32□□□□□ -1.56
SIK3-210ENST00000480468 M0QZ58 72 aa5.29□□□□□ -1.56
SIK3-210ENST00000480468 KRTAP10-8P60410 259 aa5.25□□□□□ -1.57
SIK3-210ENST00000480468 KRTAP10-4P60372 401 aaPredicted RBP5.24□□□□□ -1.57
SIK3-210ENST00000480468 LRP1Q07954 4544 aaKnown RBP5.24□□□□□ -1.57
SIK3-210ENST00000480468 HYDINQ4G0P3 5121 aa5.24□□□□□ -1.57
SIK3-210ENST00000480468 LUZP6Q538Z0 58 aa5.23□□□□□ -1.57
SIK3-210ENST00000480468 FAT3Q8TDW7 4589 aa5.21□□□□□ -1.58
SIK3-210ENST00000480468 LCE2BO14633 110 aa5.21□□□□□ -1.58
SIK3-210ENST00000480468 SMR3BP02814 79 aaPredicted RBP5.2□□□□□ -1.58
SIK3-210ENST00000480468 DYNC1H1Q14204 4646 aaKnown RBP5.2□□□□□ -1.58
SIK3-210ENST00000480468 PLAC4Q8WY50 150 aa5.2□□□□□ -1.58
SIK3-210ENST00000480468 TNXBP22105 4242 aa5.19□□□□□ -1.58
SIK3-210ENST00000480468 FAT1Q14517 4588 aa5.17□□□□□ -1.58
SIK3-210ENST00000480468 HSPG2P98160 4391 aa5.15□□□□□ -1.58
SIK3-210ENST00000480468 LOC100996750A0A140TA64 210 aa5.07□□□□□ -1.6
SIK3-210ENST00000480468 KRTAP4-6Q9BYQ5 205 aa5.07□□□□□ -1.6
SIK3-210ENST00000480468 MYCBP2O75592 4640 aa5.05□□□□□ -1.6
SIK3-210ENST00000480468 A0A1B0GVY2 172 aa5.04□□□□□ -1.6
SIK3-210ENST00000480468 PP632Q6XCG6 107 aa5.04□□□□□ -1.6
SIK3-210ENST00000480468 R4GN34 69 aa5.01□□□□□ -1.61
SIK3-210ENST00000480468 LCE2AQ5TA79 106 aaPredicted RBP4.98□□□□□ -1.61
SIK3-210ENST00000480468 KMT2CQ8NEZ4 4911 aaKnown RBP4.88□□□□□ -1.63
SIK3-210ENST00000480468 SPRR5A0A1B0GTR4 108 aa4.84□□□□□ -1.63
SIK3-210ENST00000480468 LORP23490 312 aaPredicted RBP4.83□□□□□ -1.64
SIK3-210ENST00000480468 RYR3Q15413 4870 aa4.82□□□□□ -1.64
SIK3-210ENST00000480468 LPAP08519 4548 aa4.82□□□□□ -1.64
SIK3-210ENST00000480468 KRTAP23-1A1A580 65 aa4.82□□□□□ -1.64
SIK3-210ENST00000480468 SEC61BP60468 96 aaKnown RBP4.82□□□□□ -1.64
SIK3-210ENST00000480468 Q5VSD8 79 aa4.82□□□□□ -1.64
SIK3-210ENST00000480468 CAMK2N1Q7Z7J9 78 aa4.79□□□□□ -1.64
SIK3-210ENST00000480468 LRP2P98164 4655 aa4.79□□□□□ -1.64
SIK3-210ENST00000480468 MT1HL1P0DM35 61 aa4.78□□□□□ -1.64
SIK3-210ENST00000480468 RYR2Q92736 4967 aa4.76□□□□□ -1.65
SIK3-210ENST00000480468 TNP1P09430 55 aa4.7□□□□□ -1.66
SIK3-210ENST00000480468 RYR1P21817 5038 aa4.69□□□□□ -1.66
SIK3-210ENST00000480468 PRO2289Q9P1D8 64 aa4.68□□□□□ -1.66
SIK3-210ENST00000480468 EPPK1P58107 5090 aaKnown RBP4.66□□□□□ -1.66
SIK3-210ENST00000480468 LCE2CQ5TA81 110 aa4.66□□□□□ -1.66
SIK3-210ENST00000480468 MUC17Q685J3 4493 aa4.64□□□□□ -1.67
SIK3-210ENST00000480468 KRTAP17-1Q9BYP8 105 aa4.6□□□□□ -1.67
SIK3-210ENST00000480468 INE1O15225 51 aa4.58□□□□□ -1.68
SIK3-210ENST00000480468 KRTAP19-2Q3LHN2 52 aa4.57□□□□□ -1.68
SIK3-210ENST00000480468 BIRC6Q9NR09 4857 aa4.57□□□□□ -1.68
SIK3-210ENST00000480468 J3QL48 77 aa4.56□□□□□ -1.68
SIK3-210ENST00000480468 KRTAP4-8Q9BYQ9 185 aa4.55□□□□□ -1.68
SIK3-210ENST00000480468 FLGP20930 4061 aaPredicted RBP4.53□□□□□ -1.68
SIK3-210ENST00000480468 KRTAP4-1Q9BYQ7 146 aa4.53□□□□□ -1.68
SIK3-210ENST00000480468 HERC1Q15751 4861 aa4.51□□□□□ -1.69
SIK3-210ENST00000480468 KIAA1109Q2LD37 5005 aa4.48□□□□□ -1.69
SIK3-210ENST00000480468 KRTAP9-2Q9BYQ4 174 aa4.45□□□□□ -1.7
SIK3-210ENST00000480468 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.45□□□□□ -1.7
SIK3-210ENST00000480468 ABCA13Q86UQ4 5058 aa4.45□□□□□ -1.7
SIK3-210ENST00000480468 KRTAP9-6A0A140TA67 174 aa4.42□□□□□ -1.7
SIK3-210ENST00000480468 HERC2O95714 4834 aa4.42□□□□□ -1.7
SIK3-210ENST00000480468 PCLOQ9Y6V0 5065 aa4.4□□□□□ -1.71
SIK3-210ENST00000480468 LCE3AQ5TA76 89 aa4.37□□□□□ -1.71
SIK3-210ENST00000480468 LCE3BQ5TA77 95 aa4.34□□□□□ -1.72
SIK3-210ENST00000480468 SPRR2GQ9BYE4 73 aa4.34□□□□□ -1.72
SIK3-210ENST00000480468 KRTAP8-1Q8IUC2 63 aa4.33□□□□□ -1.72
SIK3-210ENST00000480468 KRTAP4-5Q9BYR2 181 aa4.3□□□□□ -1.72
SIK3-210ENST00000480468 KRTAP19-1Q8IUB9 90 aa4.26□□□□□ -1.73
SIK3-210ENST00000480468 KRTAP4-12Q9BQ66 201 aa4.25□□□□□ -1.73
SIK3-210ENST00000480468 KRTAP4-8A0A0G2JLE6 195 aa4.23□□□□□ -1.73
SIK3-210ENST00000480468 KRTAP9-9Q9BYP9 154 aa4.22□□□□□ -1.73
SIK3-210ENST00000480468 KRTAP9-4Q9BYQ2 154 aa4.22□□□□□ -1.73
SIK3-210ENST00000480468 KRTAP10-12P60413 245 aa4.18□□□□□ -1.74
SIK3-210ENST00000480468 KRTAP12-3P60328 96 aa4.17□□□□□ -1.74
SIK3-210ENST00000480468 MUC2Q02817 5179 aa4.13□□□□□ -1.75
SIK3-210ENST00000480468 KRTAP4-7Q9BYR0 210 aa4.11□□□□□ -1.75
SIK3-210ENST00000480468 KRTAP19-8Q3LI54 63 aa4.09□□□□□ -1.75
SIK3-210ENST00000480468 KRTAP10-5P60370 271 aa4.06□□□□□ -1.76
SIK3-210ENST00000480468 KRTAP10-10P60014 251 aa4.06□□□□□ -1.76
SIK3-210ENST00000480468 LCE1DQ5T752 114 aa4.06□□□□□ -1.76
SIK3-210ENST00000480468 MT1XP80297 61 aa4.05□□□□□ -1.76
SIK3-210ENST00000480468 MT1FP04733 61 aa4.01□□□□□ -1.77
SIK3-210ENST00000480468 MT2AP02795 61 aa4.01□□□□□ -1.77
SIK3-210ENST00000480468 MT1BP07438 61 aa3.98□□□□□ -1.77
SIK3-210ENST00000480468 HMCN2Q8NDA2 5059 aa3.98□□□□□ -1.77
SIK3-210ENST00000480468 M0R2T5 61 aa3.97□□□□□ -1.77
SIK3-210ENST00000480468 MT1HP80294 61 aa3.95□□□□□ -1.78
SIK3-210ENST00000480468 LCE3CQ5T5A8 94 aa3.95□□□□□ -1.78
SIK3-210ENST00000480468 KRTAP4-9Q9BYQ8 210 aa3.95□□□□□ -1.78
SIK3-210ENST00000480468 UBR4Q5T4S7 5183 aa3.95□□□□□ -1.78
SIK3-210ENST00000480468 FAT4Q6V0I7 4981 aa3.94□□□□□ -1.78
SIK3-210ENST00000480468 KRTAP9-8Q9BYQ0 159 aa3.94□□□□□ -1.78
SIK3-210ENST00000480468 KRTAP10-7P60409 375 aaPredicted RBP3.93□□□□□ -1.78
SIK3-210ENST00000480468 KRTAP4-2Q9BYR5 136 aa3.91□□□□□ -1.78
SIK3-210ENST00000480468 KRTAP2-3P0C7H8 128 aa3.89□□□□□ -1.79
SIK3-210ENST00000480468 KRTAP2-4Q9BYR9 128 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms