RNA–Protein interactions for RNA: ENST00000480171.7

PKP4-210, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-210ENST00000480171 H1FX-AS1Q4G0G2 97 aa4.65□□□□□ -1.67
PKP4-210ENST00000480171 FAT1Q14517 4588 aa4.63□□□□□ -1.67
PKP4-210ENST00000480171 COX6B2Q6YFQ2 88 aa4.62□□□□□ -1.67
PKP4-210ENST00000480171 RYR2Q92736 4967 aa4.62□□□□□ -1.67
PKP4-210ENST00000480171 KRTAP10-4P60372 401 aaPredicted RBP4.61□□□□□ -1.67
PKP4-210ENST00000480171 KRTAP25-1Q3LHN0 102 aa4.61□□□□□ -1.67
PKP4-210ENST00000480171 A0A1B0GVY2 172 aa4.6□□□□□ -1.67
PKP4-210ENST00000480171 DYNC1H1Q14204 4646 aaKnown RBP4.58□□□□□ -1.68
PKP4-210ENST00000480171 PKHD1L1Q86WI1 4243 aa4.57□□□□□ -1.68
PKP4-210ENST00000480171 APOBP04114 4563 aaKnown RBP4.54□□□□□ -1.68
PKP4-210ENST00000480171 EPPK1P58107 5090 aaKnown RBP4.54□□□□□ -1.68
PKP4-210ENST00000480171 FLG2Q5D862 2391 aaPredicted RBP4.53□□□□□ -1.68
PKP4-210ENST00000480171 LCE2BO14633 110 aa4.53□□□□□ -1.68
PKP4-210ENST00000480171 KIAA1109Q2LD37 5005 aa4.51□□□□□ -1.69
PKP4-210ENST00000480171 RPL37P61927 97 aaKnown RBP4.49□□□□□ -1.69
PKP4-210ENST00000480171 SPINT4Q6UDR6 99 aa4.49□□□□□ -1.69
PKP4-210ENST00000480171 LCE2CQ5TA81 110 aa4.49□□□□□ -1.69
PKP4-210ENST00000480171 KRTAP10-8P60410 259 aa4.48□□□□□ -1.69
PKP4-210ENST00000480171 LCE2AQ5TA79 106 aaPredicted RBP4.48□□□□□ -1.69
PKP4-210ENST00000480171 KRTAP15-1Q3LI76 137 aa4.48□□□□□ -1.69
PKP4-210ENST00000480171 KRTAP17-1Q9BYP8 105 aa4.47□□□□□ -1.69
PKP4-210ENST00000480171 LRP1Q07954 4544 aaKnown RBP4.47□□□□□ -1.69
PKP4-210ENST00000480171 S4R3F8 94 aa4.46□□□□□ -1.7
PKP4-210ENST00000480171 KRTAP10-6P60371 365 aaPredicted RBP4.45□□□□□ -1.7
PKP4-210ENST00000480171 XP32Q5T750 250 aa4.44□□□□□ -1.7
PKP4-210ENST00000480171 MYCBP2O75592 4640 aa4.43□□□□□ -1.7
PKP4-210ENST00000480171 Q5VSD8 79 aa4.42□□□□□ -1.7
PKP4-210ENST00000480171 FAT3Q8TDW7 4589 aa4.42□□□□□ -1.7
PKP4-210ENST00000480171 DMBT1Q9UGM3 2413 aaPredicted RBP4.41□□□□□ -1.7
PKP4-210ENST00000480171 HSPG2P98160 4391 aa4.41□□□□□ -1.7
PKP4-210ENST00000480171 A0A0D9SG42 100 aa4.41□□□□□ -1.7
PKP4-210ENST00000480171 CRIPTQ9P021 101 aa4.41□□□□□ -1.7
PKP4-210ENST00000480171 KRTAP13-4Q3LI77 160 aa4.4□□□□□ -1.71
PKP4-210ENST00000480171 TNXBP22105 4242 aa4.36□□□□□ -1.71
PKP4-210ENST00000480171 RYR1P21817 5038 aa4.35□□□□□ -1.71
PKP4-210ENST00000480171 KRTAP4-5Q9BYR2 181 aa4.33□□□□□ -1.72
PKP4-210ENST00000480171 MT1HL1P0DM35 61 aa4.29□□□□□ -1.72
PKP4-210ENST00000480171 TPRXLQ17RH7 258 aa4.29□□□□□ -1.72
PKP4-210ENST00000480171 M0QZ58 72 aa4.28□□□□□ -1.72
PKP4-210ENST00000480171 R4GN34 69 aa4.28□□□□□ -1.72
PKP4-210ENST00000480171 ABCA13Q86UQ4 5058 aa4.28□□□□□ -1.72
PKP4-210ENST00000480171 KRTAP12-2P59991 146 aa4.28□□□□□ -1.72
PKP4-210ENST00000480171 KRTAP12-1P59990 96 aa4.25□□□□□ -1.73
PKP4-210ENST00000480171 C10orf95Q9H7T3 257 aa4.24□□□□□ -1.73
PKP4-210ENST00000480171 LPAP08519 4548 aa4.21□□□□□ -1.73
PKP4-210ENST00000480171 HERC2O95714 4834 aa4.19□□□□□ -1.74
PKP4-210ENST00000480171 PRO2289Q9P1D8 64 aa4.18□□□□□ -1.74
PKP4-210ENST00000480171 PCLOQ9Y6V0 5065 aa4.18□□□□□ -1.74
PKP4-210ENST00000480171 HERC1Q15751 4861 aa4.14□□□□□ -1.75
PKP4-210ENST00000480171 LRP2P98164 4655 aa4.13□□□□□ -1.75
PKP4-210ENST00000480171 MUC2Q02817 5179 aa4.11□□□□□ -1.75
PKP4-210ENST00000480171 LORP23490 312 aaPredicted RBP4.11□□□□□ -1.75
PKP4-210ENST00000480171 BIRC6Q9NR09 4857 aa4.11□□□□□ -1.75
PKP4-210ENST00000480171 RNF213Q63HN8 5207 aa3.99□□□□□ -1.77
PKP4-210ENST00000480171 KRTAP4-1Q9BYQ7 146 aa3.98□□□□□ -1.77
PKP4-210ENST00000480171 MUC17Q685J3 4493 aa3.96□□□□□ -1.78
PKP4-210ENST00000480171 UBR4Q5T4S7 5183 aa3.95□□□□□ -1.78
PKP4-210ENST00000480171 PP632Q6XCG6 107 aa3.95□□□□□ -1.78
PKP4-210ENST00000480171 PLAC4Q8WY50 150 aa3.95□□□□□ -1.78
PKP4-210ENST00000480171 KRTAP19-2Q3LHN2 52 aa3.92□□□□□ -1.78
PKP4-210ENST00000480171 FAT4Q6V0I7 4981 aa3.89□□□□□ -1.79
PKP4-210ENST00000480171 HMCN2Q8NDA2 5059 aa3.86□□□□□ -1.79
PKP4-210ENST00000480171 TNP1P09430 55 aa3.83□□□□□ -1.8
PKP4-210ENST00000480171 FLGP20930 4061 aaPredicted RBP3.79□□□□□ -1.8
PKP4-210ENST00000480171 INE1O15225 51 aa3.75□□□□□ -1.81
PKP4-210ENST00000480171 SPRR2GQ9BYE4 73 aa3.68□□□□□ -1.82
PKP4-210ENST00000480171 M0R2T5 61 aa3.67□□□□□ -1.82
PKP4-210ENST00000480171 SPRR5A0A1B0GTR4 108 aa3.64□□□□□ -1.83
PKP4-210ENST00000480171 KRTAP19-1Q8IUB9 90 aa3.64□□□□□ -1.83
PKP4-210ENST00000480171 KRTAP10-10P60014 251 aa3.58□□□□□ -1.84
PKP4-210ENST00000480171 MT1HP80294 61 aa3.58□□□□□ -1.84
PKP4-210ENST00000480171 LCE3AQ5TA76 89 aa3.56□□□□□ -1.84
PKP4-210ENST00000480171 MT2AP02795 61 aa3.55□□□□□ -1.84
PKP4-210ENST00000480171 MT1FP04733 61 aa3.54□□□□□ -1.84
PKP4-210ENST00000480171 KRTAP19-8Q3LI54 63 aa3.51□□□□□ -1.85
PKP4-210ENST00000480171 KRTAP9-8Q9BYQ0 159 aa3.5□□□□□ -1.85
PKP4-210ENST00000480171 KRTAP8-1Q8IUC2 63 aa3.49□□□□□ -1.85
PKP4-210ENST00000480171 FSIP2Q5CZC0 6907 aa3.49□□□□□ -1.85
PKP4-210ENST00000480171 USH2AO75445 5202 aa3.49□□□□□ -1.85
PKP4-210ENST00000480171 KRTAP9-6A0A140TA67 174 aa3.47□□□□□ -1.85
PKP4-210ENST00000480171 KRTAP10-5P60370 271 aa3.44□□□□□ -1.86
PKP4-210ENST00000480171 MT1BP07438 61 aa3.44□□□□□ -1.86
PKP4-210ENST00000480171 MT1XP80297 61 aa3.43□□□□□ -1.86
PKP4-210ENST00000480171 KRTAP10-12P60413 245 aa3.42□□□□□ -1.86
PKP4-210ENST00000480171 KRTAP12-3P60328 96 aa3.41□□□□□ -1.86
PKP4-210ENST00000480171 LCE5AQ5TCM9 118 aa3.41□□□□□ -1.86
PKP4-210ENST00000480171 KRTAP2-2Q9BYT5 123 aa3.36□□□□□ -1.87
PKP4-210ENST00000480171 KRTAP9-3Q9BYQ3 159 aa3.35□□□□□ -1.87
PKP4-210ENST00000480171 KRTAP10-7P60409 375 aaPredicted RBP3.33□□□□□ -1.88
PKP4-210ENST00000480171 LOC100996750A0A140TA64 210 aa3.28□□□□□ -1.89
PKP4-210ENST00000480171 KRTAP4-6Q9BYQ5 205 aa3.28□□□□□ -1.89
PKP4-210ENST00000480171 KMT2DO14686 5537 aa3.26□□□□□ -1.89
PKP4-210ENST00000480171 LCE1FQ5T754 118 aa3.24□□□□□ -1.89
PKP4-210ENST00000480171 KRTAP19-5Q3LI72 72 aa3.23□□□□□ -1.89
PKP4-210ENST00000480171 KRTAP9-4Q9BYQ2 154 aa3.23□□□□□ -1.89
PKP4-210ENST00000480171 LCE3CQ5T5A8 94 aa3.21□□□□□ -1.9
PKP4-210ENST00000480171 KRTAP9-2Q9BYQ4 174 aa3.14□□□□□ -1.91
PKP4-210ENST00000480171 SSPOA2VEC9 5147 aa3.14□□□□□ -1.91
PKP4-210ENST00000480171 LCE4AQ5TA78 99 aa3.14□□□□□ -1.91
PKP4-210ENST00000480171 LCE1EQ5T753 118 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 1038.3 ms