RNA–Protein interactions for RNA: ENST00000480102.1

PTCD3-213, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-213ENST00000480102 hDV103S1A0JD37 113 aa2.46□□□□□ -2.02
PTCD3-213ENST00000480102 ACYP1P07311 99 aa2.46□□□□□ -2.02
PTCD3-213ENST00000480102 K7EQZ3 153 aa2.45□□□□□ -2.02
PTCD3-213ENST00000480102 SPINK7P58062 85 aa2.45□□□□□ -2.02
PTCD3-213ENST00000480102 NDUFS5O43920 106 aa2.44□□□□□ -2.02
PTCD3-213ENST00000480102 C4orf26Q17RF5 130 aa2.44□□□□□ -2.02
PTCD3-213ENST00000480102 LINC00846Q9NV44 126 aa2.44□□□□□ -2.02
PTCD3-213ENST00000480102 ATP5EP2Q5VTU8 51 aa2.43□□□□□ -2.02
PTCD3-213ENST00000480102 TP53AIP1Q9HCN2 124 aa2.43□□□□□ -2.02
PTCD3-213ENST00000480102 M0R2T5 61 aa2.42□□□□□ -2.02
PTCD3-213ENST00000480102 CASC2Q6XLA1 102 aa2.42□□□□□ -2.02
PTCD3-213ENST00000480102 HCG22E2RYF7 251 aa2.41□□□□□ -2.02
PTCD3-213ENST00000480102 ETDBQ3ZM63 59 aa2.41□□□□□ -2.02
PTCD3-213ENST00000480102 C7orf65Q6ZTY9 151 aa2.41□□□□□ -2.02
PTCD3-213ENST00000480102 PRO0628Q9UI54 55 aa2.4□□□□□ -2.03
PTCD3-213ENST00000480102 FAM236DA0A1B0GTK5 79 aa2.39□□□□□ -2.03
PTCD3-213ENST00000480102 PSPHP1O15172 72 aa2.39□□□□□ -2.03
PTCD3-213ENST00000480102 FAM236CP0DP71 79 aa2.39□□□□□ -2.03
PTCD3-213ENST00000480102 OBSCNQ5VST9 7968 aa2.39□□□□□ -2.03
PTCD3-213ENST00000480102 H1FX-AS1Q4G0G2 97 aa2.38□□□□□ -2.03
PTCD3-213ENST00000480102 Q5W150 140 aa2.38□□□□□ -2.03
PTCD3-213ENST00000480102 CAMK2N1Q7Z7J9 78 aa2.38□□□□□ -2.03
PTCD3-213ENST00000480102 LINC00643Q86TS7 51 aa2.37□□□□□ -2.03
PTCD3-213ENST00000480102 Q8N9L7 120 aa2.37□□□□□ -2.03
PTCD3-213ENST00000480102 CRCT1Q9UGL9 99 aa2.37□□□□□ -2.03
PTCD3-213ENST00000480102 MT2AP02795 61 aa2.36□□□□□ -2.03
PTCD3-213ENST00000480102 ANAPC13Q9BS18 74 aa2.36□□□□□ -2.03
PTCD3-213ENST00000480102 LOC101927531A0A1B0GV80 90 aa2.35□□□□□ -2.03
PTCD3-213ENST00000480102 J3QR89 54 aa2.35□□□□□ -2.03
PTCD3-213ENST00000480102 ATOX1O00244 68 aa2.35□□□□□ -2.03
PTCD3-213ENST00000480102 LCE3EQ5T5B0 92 aa2.35□□□□□ -2.03
PTCD3-213ENST00000480102 UQCRQO14949 82 aa2.34□□□□□ -2.03
PTCD3-213ENST00000480102 USH2AO75445 5202 aa2.33□□□□□ -2.04
PTCD3-213ENST00000480102 TRAV22A0A0B4J277 110 aa2.33□□□□□ -2.04
PTCD3-213ENST00000480102 MT1FP04733 61 aa2.33□□□□□ -2.04
PTCD3-213ENST00000480102 KRTAP4-3Q9BYR4 195 aa2.33□□□□□ -2.04
PTCD3-213ENST00000480102 CYP4F30PQ9H0H9 118 aa2.33□□□□□ -2.04
PTCD3-213ENST00000480102 A8MUN3 132 aa2.32□□□□□ -2.04
PTCD3-213ENST00000480102 MP68P56378 58 aa2.32□□□□□ -2.04
PTCD3-213ENST00000480102 IMUPQ9GZP8 106 aa2.32□□□□□ -2.04
PTCD3-213ENST00000480102 H3BPC8 53 aa2.31□□□□□ -2.04
PTCD3-213ENST00000480102 FSIP2Q5CZC0 6907 aa2.31□□□□□ -2.04
PTCD3-213ENST00000480102 A8MU10 97 aa2.3□□□□□ -2.04
PTCD3-213ENST00000480102 H0YAA0 97 aa2.3□□□□□ -2.04
PTCD3-213ENST00000480102 KRTAP10-10P60014 251 aa2.3□□□□□ -2.04
PTCD3-213ENST00000480102 KRTAP12-2P59991 146 aa2.29□□□□□ -2.04
PTCD3-213ENST00000480102 CSAG1Q6PB30 78 aa2.29□□□□□ -2.04
PTCD3-213ENST00000480102 C1orf64Q8NEQ6 169 aa2.29□□□□□ -2.04
PTCD3-213ENST00000480102 SSPOA2VEC9 5147 aa2.28□□□□□ -2.04
PTCD3-213ENST00000480102 A0A1B0GV90 55 aa2.28□□□□□ -2.04
PTCD3-213ENST00000480102 HIST1H4AP62805 103 aaKnown RBP2.28□□□□□ -2.04
PTCD3-213ENST00000480102 CRIPTQ9P021 101 aa2.28□□□□□ -2.04
PTCD3-213ENST00000480102 K7ERU9 68 aa2.27□□□□□ -2.05
PTCD3-213ENST00000480102 KRTAP19-6Q3LI70 58 aa2.27□□□□□ -2.05
PTCD3-213ENST00000480102 LUZP6Q538Z0 58 aa2.27□□□□□ -2.05
PTCD3-213ENST00000480102 SMIM20Q8N5G0 67 aa2.27□□□□□ -2.05
PTCD3-213ENST00000480102 S4R3F8 94 aa2.27□□□□□ -2.05
PTCD3-213ENST00000480102 H0Y9P7 68 aa2.26□□□□□ -2.05
PTCD3-213ENST00000480102 KRTAP5-2Q701N4 177 aa2.26□□□□□ -2.05
PTCD3-213ENST00000480102 SPRR2GQ9BYE4 73 aa2.26□□□□□ -2.05
PTCD3-213ENST00000480102 PMAIP1Q13794 54 aa2.25□□□□□ -2.05
PTCD3-213ENST00000480102 LCA10Q71F78 164 aa2.25□□□□□ -2.05
PTCD3-213ENST00000480102 A0A087WVE0 104 aa2.24□□□□□ -2.05
PTCD3-213ENST00000480102 NDUFC1O43677 76 aa2.23□□□□□ -2.05
PTCD3-213ENST00000480102 KRTAP19-8Q3LI54 63 aa2.23□□□□□ -2.05
PTCD3-213ENST00000480102 FCGBPQ9Y6R7 5405 aaPredicted RBP2.22□□□□□ -2.05
PTCD3-213ENST00000480102 KLKP1Q107X0 134 aa2.22□□□□□ -2.05
PTCD3-213ENST00000480102 DMAC1Q96GE9 116 aa2.22□□□□□ -2.05
PTCD3-213ENST00000480102 LINC00208Q96KT6 92 aa2.22□□□□□ -2.05
PTCD3-213ENST00000480102 SCGB1A1P11684 91 aa2.21□□□□□ -2.06
PTCD3-213ENST00000480102 TRAV7A0A075B6U4 112 aa2.2□□□□□ -2.06
PTCD3-213ENST00000480102 LCE3AQ5TA76 89 aa2.2□□□□□ -2.06
PTCD3-213ENST00000480102 K7ERS5 55 aa2.19□□□□□ -2.06
PTCD3-213ENST00000480102 C20orf197Q8N268 126 aa2.19□□□□□ -2.06
PTCD3-213ENST00000480102 FAM236AA0A1B0GUQ0 79 aa2.18□□□□□ -2.06
PTCD3-213ENST00000480102 FAM236BA0A1B0GV22 79 aa2.18□□□□□ -2.06
PTCD3-213ENST00000480102 A6NED7 52 aa2.18□□□□□ -2.06
PTCD3-213ENST00000480102 ADM2Q7Z4H4 148 aa2.18□□□□□ -2.06
PTCD3-213ENST00000480102 SPANXA2-OT1Q8N9U9 137 aa2.18□□□□□ -2.06
PTCD3-213ENST00000480102 MT-ATP8P03928 68 aa2.17□□□□□ -2.06
PTCD3-213ENST00000480102 MT1BP07438 61 aa2.17□□□□□ -2.06
PTCD3-213ENST00000480102 Q5VV11 94 aa2.17□□□□□ -2.06
PTCD3-213ENST00000480102 ACYP2P14621 99 aa2.16□□□□□ -2.06
PTCD3-213ENST00000480102 SERP2Q8N6R1 65 aa2.15□□□□□ -2.07
PTCD3-213ENST00000480102 SPTSSBQ8NFR3 76 aa2.15□□□□□ -2.07
PTCD3-213ENST00000480102 KRTAP6-3Q3LI67 103 aa2.12□□□□□ -2.07
PTCD3-213ENST00000480102 A6NN06 94 aa2.11□□□□□ -2.07
PTCD3-213ENST00000480102 PRO2289Q9P1D8 64 aa2.11□□□□□ -2.07
PTCD3-213ENST00000480102 M0QZ58 72 aa2.1□□□□□ -2.07
PTCD3-213ENST00000480102 R4GN34 69 aa2.1□□□□□ -2.07
PTCD3-213ENST00000480102 MACF1Q9UPN3 7388 aaKnown RBP2.1□□□□□ -2.07
PTCD3-213ENST00000480102 COX7CP15954 63 aa2.08□□□□□ -2.08
PTCD3-213ENST00000480102 P0C880 135 aa2.07□□□□□ -2.08
PTCD3-213ENST00000480102 CHKB-CPT1BH3BT56 60 aa2.06□□□□□ -2.08
PTCD3-213ENST00000480102 PLAC4Q8WY50 150 aa2.06□□□□□ -2.08
PTCD3-213ENST00000480102 SNURFQ9Y675 71 aa2.06□□□□□ -2.08
PTCD3-213ENST00000480102 H7BZZ5 65 aa2.05□□□□□ -2.08
PTCD3-213ENST00000480102 MT1XP80297 61 aa2.05□□□□□ -2.08
PTCD3-213ENST00000480102 SYNE2Q8WXH0 6885 aaKnown RBP2.04□□□□□ -2.08
PTCD3-213ENST00000480102 KRTAP5-5Q701N2 237 aaPredicted RBP2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 180.4 ms