RNA–Protein interactions for RNA: ENST00000480032.4

SCN2A-205, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 1 (best)

Gene SCN2A, Length 11,676 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-205ENST00000480032 HYDINQ4G0P3 5121 aa1.62□□□□□ -2.15
SCN2A-205ENST00000480032 PCLOQ9Y6V0 5065 aa1.62□□□□□ -2.15
SCN2A-205ENST00000480032 CUBNO60494 3623 aa1.61□□□□□ -2.15
SCN2A-205ENST00000480032 KIAA1109Q2LD37 5005 aa1.61□□□□□ -2.15
SCN2A-205ENST00000480032 DNAH11Q96DT5 4516 aa1.61□□□□□ -2.15
SCN2A-205ENST00000480032 CSMD1Q96PZ7 3565 aa1.61□□□□□ -2.15
SCN2A-205ENST00000480032 MT1HL1P0DM35 61 aa1.6□□□□□ -2.15
SCN2A-205ENST00000480032 LAMA5O15230 3695 aa1.6□□□□□ -2.15
SCN2A-205ENST00000480032 LCE3CQ5T5A8 94 aa1.6□□□□□ -2.15
SCN2A-205ENST00000480032 DNHD1Q96M86 4753 aa1.59□□□□□ -2.15
SCN2A-205ENST00000480032 LCE3AQ5TA76 89 aa1.59□□□□□ -2.16
SCN2A-205ENST00000480032 SMG1Q96Q15 3661 aaKnown RBP1.59□□□□□ -2.16
SCN2A-205ENST00000480032 DNAH10Q8IVF4 4471 aa1.58□□□□□ -2.16
SCN2A-205ENST00000480032 CSMD2Q7Z408 3487 aa1.57□□□□□ -2.16
SCN2A-205ENST00000480032 RYR3Q15413 4870 aa1.57□□□□□ -2.16
SCN2A-205ENST00000480032 ANK2Q01484 3957 aa1.57□□□□□ -2.16
SCN2A-205ENST00000480032 ALMS1Q8TCU4 4167 aa1.57□□□□□ -2.16
SCN2A-205ENST00000480032 PLECQ15149 4684 aaKnown RBP1.57□□□□□ -2.16
SCN2A-205ENST00000480032 SPRR2FQ96RM1 72 aa1.56□□□□□ -2.16
SCN2A-205ENST00000480032 HERC2O95714 4834 aa1.56□□□□□ -2.16
SCN2A-205ENST00000480032 SPENQ96T58 3664 aaKnown RBP1.56□□□□□ -2.16
SCN2A-205ENST00000480032 DMDP11532 3685 aa1.55□□□□□ -2.16
SCN2A-205ENST00000480032 KRTAP19-8Q3LI54 63 aa1.55□□□□□ -2.16
SCN2A-205ENST00000480032 ANK3Q12955 4377 aaKnown RBP1.54□□□□□ -2.16
SCN2A-205ENST00000480032 SPRR2EP22531 72 aa1.54□□□□□ -2.16
SCN2A-205ENST00000480032 SPRR2BP35325 72 aa1.54□□□□□ -2.16
SCN2A-205ENST00000480032 SPRR2AP35326 72 aa1.54□□□□□ -2.16
SCN2A-205ENST00000480032 LCE2DQ5TA82 110 aaPredicted RBP1.54□□□□□ -2.16
SCN2A-205ENST00000480032 SVEP1Q4LDE5 3571 aa1.53□□□□□ -2.16
SCN2A-205ENST00000480032 DNAH1Q9P2D7 4330 aa1.52□□□□□ -2.17
SCN2A-205ENST00000480032 HERC1Q15751 4861 aa1.52□□□□□ -2.17
SCN2A-205ENST00000480032 ABCA13Q86UQ4 5058 aa1.51□□□□□ -2.17
SCN2A-205ENST00000480032 DNAH5Q8TE73 4624 aa1.51□□□□□ -2.17
SCN2A-205ENST00000480032 KMT2CQ8NEZ4 4911 aaKnown RBP1.5□□□□□ -2.17
SCN2A-205ENST00000480032 DNAH17Q9UFH2 4485 aa1.5□□□□□ -2.17
SCN2A-205ENST00000480032 KRTAP12-4P60329 112 aa1.5□□□□□ -2.17
SCN2A-205ENST00000480032 SPRR2DP22532 72 aa1.5□□□□□ -2.17
SCN2A-205ENST00000480032 KRTAP2-3P0C7H8 128 aa1.49□□□□□ -2.17
SCN2A-205ENST00000480032 KRTAP2-4Q9BYR9 128 aa1.49□□□□□ -2.17
SCN2A-205ENST00000480032 KRTAP2-1Q9BYU5 128 aa1.49□□□□□ -2.17
SCN2A-205ENST00000480032 DYNC1H1Q14204 4646 aaKnown RBP1.49□□□□□ -2.17
SCN2A-205ENST00000480032 HUWE1Q7Z6Z7 4374 aaKnown RBP1.49□□□□□ -2.17
SCN2A-205ENST00000480032 LCE3EQ5T5B0 92 aa1.48□□□□□ -2.17
SCN2A-205ENST00000480032 VPS13DQ5THJ4 4388 aa1.47□□□□□ -2.17
SCN2A-205ENST00000480032 DNAH3Q8TD57 4116 aa1.47□□□□□ -2.17
SCN2A-205ENST00000480032 DYNC2H1Q8NCM8 4307 aaKnown RBP1.46□□□□□ -2.18
SCN2A-205ENST00000480032 MYCBP2O75592 4640 aa1.46□□□□□ -2.18
SCN2A-205ENST00000480032 MT1LQ93083 61 aa1.46□□□□□ -2.18
SCN2A-205ENST00000480032 KRTAP9-6A0A140TA67 174 aa1.45□□□□□ -2.18
SCN2A-205ENST00000480032 DNAH9Q9NYC9 4486 aa1.45□□□□□ -2.18
SCN2A-205ENST00000480032 HSPG2P98160 4391 aa1.44□□□□□ -2.18
SCN2A-205ENST00000480032 LCE2BO14633 110 aa1.44□□□□□ -2.18
SCN2A-205ENST00000480032 TRRAPQ9Y4A5 3859 aa1.44□□□□□ -2.18
SCN2A-205ENST00000480032 DNAH6Q9C0G6 4158 aa1.44□□□□□ -2.18
SCN2A-205ENST00000480032 ZNF469Q96JG9 3925 aaPredicted RBP1.44□□□□□ -2.18
SCN2A-205ENST00000480032 VPS13CQ709C8 3753 aa1.43□□□□□ -2.18
SCN2A-205ENST00000480032 HMCN2Q8NDA2 5059 aa1.43□□□□□ -2.18
SCN2A-205ENST00000480032 SACSQ9NZJ4 4579 aa1.43□□□□□ -2.18
SCN2A-205ENST00000480032 KRTAP9-2Q9BYQ4 174 aa1.43□□□□□ -2.18
SCN2A-205ENST00000480032 LCE2CQ5TA81 110 aa1.43□□□□□ -2.18
SCN2A-205ENST00000480032 LCE3DQ9BYE3 92 aa1.43□□□□□ -2.18
SCN2A-205ENST00000480032 MT1GP13640 62 aa1.43□□□□□ -2.18
SCN2A-205ENST00000480032 FAT3Q8TDW7 4589 aa1.42□□□□□ -2.18
SCN2A-205ENST00000480032 UBR4Q5T4S7 5183 aa1.41□□□□□ -2.18
SCN2A-205ENST00000480032 STARD9Q9P2P6 4700 aa1.41□□□□□ -2.18
SCN2A-205ENST00000480032 MT1EP04732 61 aa1.41□□□□□ -2.18
SCN2A-205ENST00000480032 KRTAP19-1Q8IUB9 90 aa1.41□□□□□ -2.18
SCN2A-205ENST00000480032 MT1AP04731 61 aa1.41□□□□□ -2.18
SCN2A-205ENST00000480032 CSMD3Q7Z407 3707 aa1.4□□□□□ -2.18
SCN2A-205ENST00000480032 DNAH8Q96JB1 4490 aa1.4□□□□□ -2.19
SCN2A-205ENST00000480032 RNF213Q63HN8 5207 aa1.4□□□□□ -2.19
SCN2A-205ENST00000480032 AKAP9Q99996 3911 aa1.4□□□□□ -2.19
SCN2A-205ENST00000480032 APOBP04114 4563 aaKnown RBP1.39□□□□□ -2.19
SCN2A-205ENST00000480032 MT1HP80294 61 aa1.39□□□□□ -2.19
SCN2A-205ENST00000480032 CMYA5Q8N3K9 4069 aa1.38□□□□□ -2.19
SCN2A-205ENST00000480032 MT1FP04733 61 aa1.37□□□□□ -2.19
SCN2A-205ENST00000480032 DNAH2Q9P225 4427 aa1.37□□□□□ -2.19
SCN2A-205ENST00000480032 KRTAP19-2Q3LHN2 52 aa1.36□□□□□ -2.19
SCN2A-205ENST00000480032 LCE3BQ5TA77 95 aa1.36□□□□□ -2.19
SCN2A-205ENST00000480032 PRKDCP78527 4128 aaKnown RBP1.36□□□□□ -2.19
SCN2A-205ENST00000480032 EPPK1P58107 5090 aaKnown RBP1.36□□□□□ -2.19
SCN2A-205ENST00000480032 MT4P47944 62 aa1.35□□□□□ -2.19
SCN2A-205ENST00000480032 MT2AP02795 61 aa1.34□□□□□ -2.19
SCN2A-205ENST00000480032 KRTAP19-5Q3LI72 72 aa1.34□□□□□ -2.19
SCN2A-205ENST00000480032 KRTAP9-7A8MTY7 169 aa1.34□□□□□ -2.19
SCN2A-205ENST00000480032 FRAS1Q86XX4 4008 aa1.34□□□□□ -2.2
SCN2A-205ENST00000480032 LCE2AQ5TA79 106 aaPredicted RBP1.33□□□□□ -2.2
SCN2A-205ENST00000480032 DNAH7Q8WXX0 4024 aa1.32□□□□□ -2.2
SCN2A-205ENST00000480032 MT1XP80297 61 aa1.32□□□□□ -2.2
SCN2A-205ENST00000480032 MUC12Q9UKN1 5478 aa1.32□□□□□ -2.2
SCN2A-205ENST00000480032 PKHD1P08F94 4074 aa1.31□□□□□ -2.2
SCN2A-205ENST00000480032 FAT1Q14517 4588 aa1.31□□□□□ -2.2
SCN2A-205ENST00000480032 KRTAP20-1Q3LI63 56 aa1.31□□□□□ -2.2
SCN2A-205ENST00000480032 LRP1Q07954 4544 aaKnown RBP1.31□□□□□ -2.2
SCN2A-205ENST00000480032 USH2AO75445 5202 aa1.31□□□□□ -2.2
SCN2A-205ENST00000480032 OBSCNQ5VST9 7968 aa1.31□□□□□ -2.2
SCN2A-205ENST00000480032 MUC17Q685J3 4493 aa1.31□□□□□ -2.2
SCN2A-205ENST00000480032 FAT4Q6V0I7 4981 aa1.3□□□□□ -2.2
SCN2A-205ENST00000480032 VPS13BQ7Z7G8 4022 aa1.29□□□□□ -2.2
SCN2A-205ENST00000480032 HECTD4Q9Y4D8 3996 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms