RNA–Protein interactions for RNA: ENST00000479868.6

SEC13-216, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best)

Gene SEC13, Length 2,374 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-216ENST00000479868 MT1HL1P0DM35 61 aa6.91□□□□□ -1.3
SEC13-216ENST00000479868 PRAC1Q96KF2 57 aa6.89□□□□□ -1.31
SEC13-216ENST00000479868 KRTAP3-1Q9BYR8 98 aa6.89□□□□□ -1.31
SEC13-216ENST00000479868 A0A1B0GU69 56 aa6.87□□□□□ -1.31
SEC13-216ENST00000479868 XP32Q5T750 250 aa6.85□□□□□ -1.31
SEC13-216ENST00000479868 RPL37P61927 97 aaKnown RBP6.83□□□□□ -1.32
SEC13-216ENST00000479868 COX6B2Q6YFQ2 88 aa6.79□□□□□ -1.32
SEC13-216ENST00000479868 KRTAP4-5Q9BYR2 181 aa6.77□□□□□ -1.32
SEC13-216ENST00000479868 ADM2Q7Z4H4 148 aa6.77□□□□□ -1.33
SEC13-216ENST00000479868 ABCA13Q86UQ4 5058 aa6.72□□□□□ -1.33
SEC13-216ENST00000479868 UQCR11O14957 56 aa6.71□□□□□ -1.34
SEC13-216ENST00000479868 SPATA8Q6RVD6 105 aa6.69□□□□□ -1.34
SEC13-216ENST00000479868 LRP2P98164 4655 aa6.68□□□□□ -1.34
SEC13-216ENST00000479868 MIR22HGQ0VDD5 57 aa6.67□□□□□ -1.34
SEC13-216ENST00000479868 TPRXLQ17RH7 258 aa6.67□□□□□ -1.34
SEC13-216ENST00000479868 LPAP08519 4548 aa6.67□□□□□ -1.34
SEC13-216ENST00000479868 KRTAP3-3Q9BYR6 98 aa6.61□□□□□ -1.35
SEC13-216ENST00000479868 CSAG1Q6PB30 78 aa6.61□□□□□ -1.35
SEC13-216ENST00000479868 ROMO1P60602 79 aa6.59□□□□□ -1.35
SEC13-216ENST00000479868 H0YAA0 97 aa6.56□□□□□ -1.36
SEC13-216ENST00000479868 S4R3F8 94 aa6.56□□□□□ -1.36
SEC13-216ENST00000479868 A0A1B0GU33 70 aa6.55□□□□□ -1.36
SEC13-216ENST00000479868 HERC2O95714 4834 aa6.55□□□□□ -1.36
SEC13-216ENST00000479868 H1FX-AS1Q4G0G2 97 aa6.54□□□□□ -1.36
SEC13-216ENST00000479868 KRTAP10-6P60371 365 aaPredicted RBP6.48□□□□□ -1.37
SEC13-216ENST00000479868 BIRC6Q9NR09 4857 aa6.48□□□□□ -1.37
SEC13-216ENST00000479868 KRTAP3-2Q9BYR7 98 aa6.45□□□□□ -1.38
SEC13-216ENST00000479868 P0C880 135 aa6.39□□□□□ -1.39
SEC13-216ENST00000479868 KRTAP13-4Q3LI77 160 aa6.38□□□□□ -1.39
SEC13-216ENST00000479868 MUC17Q685J3 4493 aa6.38□□□□□ -1.39
SEC13-216ENST00000479868 KRTAP4-1Q9BYQ7 146 aa6.38□□□□□ -1.39
SEC13-216ENST00000479868 KRTAP25-1Q3LHN0 102 aa6.37□□□□□ -1.39
SEC13-216ENST00000479868 LUZP6Q538Z0 58 aa6.32□□□□□ -1.4
SEC13-216ENST00000479868 PCLOQ9Y6V0 5065 aa6.31□□□□□ -1.4
SEC13-216ENST00000479868 A0A0D9SG42 100 aa6.29□□□□□ -1.4
SEC13-216ENST00000479868 HERC1Q15751 4861 aa6.26□□□□□ -1.41
SEC13-216ENST00000479868 MUC2Q02817 5179 aa6.25□□□□□ -1.41
SEC13-216ENST00000479868 K7ERS5 55 aa6.25□□□□□ -1.41
SEC13-216ENST00000479868 KRTAP19-2Q3LHN2 52 aa6.23□□□□□ -1.41
SEC13-216ENST00000479868 HMCN2Q8NDA2 5059 aa6.18□□□□□ -1.42
SEC13-216ENST00000479868 NDUFAF8A1L188 74 aa6.15□□□□□ -1.42
SEC13-216ENST00000479868 M0QZ58 72 aa6.15□□□□□ -1.42
SEC13-216ENST00000479868 KRTAP12-2P59991 146 aa6.15□□□□□ -1.43
SEC13-216ENST00000479868 KRTAP12-1P59990 96 aa6.11□□□□□ -1.43
SEC13-216ENST00000479868 FLGP20930 4061 aaPredicted RBP6.1□□□□□ -1.43
SEC13-216ENST00000479868 SPINT4Q6UDR6 99 aa6.09□□□□□ -1.43
SEC13-216ENST00000479868 LORP23490 312 aaPredicted RBP6.09□□□□□ -1.43
SEC13-216ENST00000479868 KRTAP23-1A1A580 65 aa6.07□□□□□ -1.44
SEC13-216ENST00000479868 R4GN34 69 aa6.07□□□□□ -1.44
SEC13-216ENST00000479868 CRIPTQ9P021 101 aa6.06□□□□□ -1.44
SEC13-216ENST00000479868 KRTAP15-1Q3LI76 137 aa6.01□□□□□ -1.45
SEC13-216ENST00000479868 LCE2CQ5TA81 110 aa5.95□□□□□ -1.46
SEC13-216ENST00000479868 UBR4Q5T4S7 5183 aa5.95□□□□□ -1.46
SEC13-216ENST00000479868 FAT4Q6V0I7 4981 aa5.94□□□□□ -1.46
SEC13-216ENST00000479868 CAMK2N1Q7Z7J9 78 aa5.92□□□□□ -1.46
SEC13-216ENST00000479868 RNF213Q63HN8 5207 aa5.91□□□□□ -1.46
SEC13-216ENST00000479868 C10orf95Q9H7T3 257 aa5.89□□□□□ -1.47
SEC13-216ENST00000479868 MT1HP80294 61 aa5.8□□□□□ -1.48
SEC13-216ENST00000479868 M0R2T5 61 aa5.77□□□□□ -1.49
SEC13-216ENST00000479868 LCE2DQ5TA82 110 aaPredicted RBP5.74□□□□□ -1.49
SEC13-216ENST00000479868 SPRR2GQ9BYE4 73 aa5.67□□□□□ -1.5
SEC13-216ENST00000479868 KRTAP19-1Q8IUB9 90 aa5.66□□□□□ -1.5
SEC13-216ENST00000479868 MT2AP02795 61 aa5.65□□□□□ -1.51
SEC13-216ENST00000479868 MT1FP04733 61 aa5.64□□□□□ -1.51
SEC13-216ENST00000479868 KRTAP9-8Q9BYQ0 159 aa5.64□□□□□ -1.51
SEC13-216ENST00000479868 KRTAP10-10P60014 251 aa5.61□□□□□ -1.51
SEC13-216ENST00000479868 PLAC4Q8WY50 150 aa5.54□□□□□ -1.52
SEC13-216ENST00000479868 TNP1P09430 55 aa5.48□□□□□ -1.53
SEC13-216ENST00000479868 PP632Q6XCG6 107 aa5.47□□□□□ -1.53
SEC13-216ENST00000479868 KRTAP19-8Q3LI54 63 aa5.45□□□□□ -1.54
SEC13-216ENST00000479868 LCE2AQ5TA79 106 aaPredicted RBP5.44□□□□□ -1.54
SEC13-216ENST00000479868 MT1BP07438 61 aa5.41□□□□□ -1.54
SEC13-216ENST00000479868 KRTAP9-3Q9BYQ3 159 aa5.41□□□□□ -1.54
SEC13-216ENST00000479868 PRO2289Q9P1D8 64 aa5.33□□□□□ -1.56
SEC13-216ENST00000479868 KRTAP10-5P60370 271 aa5.31□□□□□ -1.56
SEC13-216ENST00000479868 MT1XP80297 61 aa5.31□□□□□ -1.56
SEC13-216ENST00000479868 LCE3AQ5TA76 89 aa5.25□□□□□ -1.57
SEC13-216ENST00000479868 LCE2BO14633 110 aa5.23□□□□□ -1.57
SEC13-216ENST00000479868 USH2AO75445 5202 aa5.16□□□□□ -1.58
SEC13-216ENST00000479868 KRTAP10-7P60409 375 aaPredicted RBP5.15□□□□□ -1.59
SEC13-216ENST00000479868 KRTAP10-12P60413 245 aa5.12□□□□□ -1.59
SEC13-216ENST00000479868 KRTAP8-1Q8IUC2 63 aa5.11□□□□□ -1.59
SEC13-216ENST00000479868 SPRR5A0A1B0GTR4 108 aa5.03□□□□□ -1.6
SEC13-216ENST00000479868 INE1O15225 51 aa5□□□□□ -1.61
SEC13-216ENST00000479868 KRTAP12-3P60328 96 aa5□□□□□ -1.61
SEC13-216ENST00000479868 KMT2DO14686 5537 aa4.95□□□□□ -1.62
SEC13-216ENST00000479868 KRTAP4-8A0A0G2JLE6 195 aa4.89□□□□□ -1.63
SEC13-216ENST00000479868 KRTAP19-5Q3LI72 72 aa4.89□□□□□ -1.63
SEC13-216ENST00000479868 KRTAP4-8Q9BYQ9 185 aa4.89□□□□□ -1.63
SEC13-216ENST00000479868 SSPOA2VEC9 5147 aa4.88□□□□□ -1.63
SEC13-216ENST00000479868 FSIP2Q5CZC0 6907 aa4.81□□□□□ -1.64
SEC13-216ENST00000479868 KRTAP19-6Q3LI70 58 aa4.76□□□□□ -1.65
SEC13-216ENST00000479868 KRTAP19-7Q3SYF9 63 aa4.74□□□□□ -1.65
SEC13-216ENST00000479868 LCE3CQ5T5A8 94 aa4.7□□□□□ -1.66
SEC13-216ENST00000479868 MT1EP04732 61 aa4.61□□□□□ -1.67
SEC13-216ENST00000479868 FCGBPQ9Y6R7 5405 aaPredicted RBP4.58□□□□□ -1.68
SEC13-216ENST00000479868 MT1LQ93083 61 aa4.57□□□□□ -1.68
SEC13-216ENST00000479868 KRTAP4-7Q9BYR0 210 aa4.57□□□□□ -1.68
SEC13-216ENST00000479868 KRTAP9-6A8MVA2 160 aa4.53□□□□□ -1.68
SEC13-216ENST00000479868 KRTAP19-4Q3LI73 84 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 68 ms