RNA–Protein interactions for RNA: ENST00000479733.5

COL13A1-208, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 5

Gene COL13A1, Length 2,934 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-208ENST00000479733 KRTAP3-3Q9BYR6 98 aa10.68□□□□□ -0.7
COL13A1-208ENST00000479733 C10orf95Q9H7T3 257 aa10.68□□□□□ -0.7
COL13A1-208ENST00000479733 PKHD1L1Q86WI1 4243 aa10.67□□□□□ -0.7
COL13A1-208ENST00000479733 TPRXLQ17RH7 258 aa10.67□□□□□ -0.7
COL13A1-208ENST00000479733 SPINT4Q6UDR6 99 aa10.67□□□□□ -0.7
COL13A1-208ENST00000479733 KMT2CQ8NEZ4 4911 aaKnown RBP10.66□□□□□ -0.7
COL13A1-208ENST00000479733 APOBP04114 4563 aaKnown RBP10.61□□□□□ -0.71
COL13A1-208ENST00000479733 KRTAP10-4P60372 401 aaPredicted RBP10.61□□□□□ -0.71
COL13A1-208ENST00000479733 KRTAP3-2Q9BYR7 98 aa10.61□□□□□ -0.71
COL13A1-208ENST00000479733 KRTAP10-8P60410 259 aa10.57□□□□□ -0.72
COL13A1-208ENST00000479733 RYR2Q92736 4967 aa10.57□□□□□ -0.72
COL13A1-208ENST00000479733 MYCBP2O75592 4640 aa10.55□□□□□ -0.72
COL13A1-208ENST00000479733 S4R3F8 94 aa10.54□□□□□ -0.72
COL13A1-208ENST00000479733 HSPG2P98160 4391 aa10.54□□□□□ -0.72
COL13A1-208ENST00000479733 LRP1Q07954 4544 aaKnown RBP10.53□□□□□ -0.72
COL13A1-208ENST00000479733 FAT3Q8TDW7 4589 aa10.47□□□□□ -0.73
COL13A1-208ENST00000479733 KRTAP12-2P59991 146 aa10.46□□□□□ -0.73
COL13A1-208ENST00000479733 A0A1B0GVY2 172 aa10.46□□□□□ -0.74
COL13A1-208ENST00000479733 NDUFAF8A1L188 74 aa10.37□□□□□ -0.75
COL13A1-208ENST00000479733 XP32Q5T750 250 aa10.36□□□□□ -0.75
COL13A1-208ENST00000479733 RYR3Q15413 4870 aa10.35□□□□□ -0.75
COL13A1-208ENST00000479733 KRTAP15-1Q3LI76 137 aa10.29□□□□□ -0.76
COL13A1-208ENST00000479733 KRTAP12-1P59990 96 aa10.29□□□□□ -0.76
COL13A1-208ENST00000479733 TNXBP22105 4242 aa10.29□□□□□ -0.76
COL13A1-208ENST00000479733 LPAP08519 4548 aa10.22□□□□□ -0.77
COL13A1-208ENST00000479733 Q5VSD8 79 aa10.11□□□□□ -0.79
COL13A1-208ENST00000479733 A0A0A0MQY5 61 aa10.1□□□□□ -0.79
COL13A1-208ENST00000479733 LRP2P98164 4655 aa10.05□□□□□ -0.8
COL13A1-208ENST00000479733 M0QZ58 72 aa10.03□□□□□ -0.8
COL13A1-208ENST00000479733 KIAA1109Q2LD37 5005 aa10.03□□□□□ -0.8
COL13A1-208ENST00000479733 RYR1P21817 5038 aa10.02□□□□□ -0.81
COL13A1-208ENST00000479733 KRTAP17-1Q9BYP8 105 aa10□□□□□ -0.81
COL13A1-208ENST00000479733 EPPK1P58107 5090 aaKnown RBP9.98□□□□□ -0.81
COL13A1-208ENST00000479733 R4GN34 69 aa9.88□□□□□ -0.83
COL13A1-208ENST00000479733 MT1HL1P0DM35 61 aa9.84□□□□□ -0.83
COL13A1-208ENST00000479733 LORP23490 312 aaPredicted RBP9.74□□□□□ -0.85
COL13A1-208ENST00000479733 PLAC4Q8WY50 150 aa9.72□□□□□ -0.85
COL13A1-208ENST00000479733 ABCA13Q86UQ4 5058 aa9.64□□□□□ -0.87
COL13A1-208ENST00000479733 KRTAP4-5Q9BYR2 181 aa9.62□□□□□ -0.87
COL13A1-208ENST00000479733 CAMK2N1Q7Z7J9 78 aa9.47□□□□□ -0.89
COL13A1-208ENST00000479733 KRTAP4-1Q9BYQ7 146 aa9.39□□□□□ -0.91
COL13A1-208ENST00000479733 LUZP6Q538Z0 58 aa9.38□□□□□ -0.91
COL13A1-208ENST00000479733 MUC17Q685J3 4493 aa9.38□□□□□ -0.91
COL13A1-208ENST00000479733 HERC2O95714 4834 aa9.37□□□□□ -0.91
COL13A1-208ENST00000479733 SEC61BP60468 96 aaKnown RBP9.35□□□□□ -0.91
COL13A1-208ENST00000479733 PP632Q6XCG6 107 aa9.29□□□□□ -0.92
COL13A1-208ENST00000479733 BIRC6Q9NR09 4857 aa9.26□□□□□ -0.93
COL13A1-208ENST00000479733 MUC2Q02817 5179 aa9.25□□□□□ -0.93
COL13A1-208ENST00000479733 J3QL48 77 aa9.21□□□□□ -0.94
COL13A1-208ENST00000479733 KRTAP19-2Q3LHN2 52 aa9.11□□□□□ -0.95
COL13A1-208ENST00000479733 TNP1P09430 55 aa9.06□□□□□ -0.96
COL13A1-208ENST00000479733 PCLOQ9Y6V0 5065 aa9.05□□□□□ -0.96
COL13A1-208ENST00000479733 HERC1Q15751 4861 aa9.02□□□□□ -0.97
COL13A1-208ENST00000479733 FLGP20930 4061 aaPredicted RBP8.9□□□□□ -0.99
COL13A1-208ENST00000479733 SPRR5A0A1B0GTR4 108 aa8.8□□□□□ -1
COL13A1-208ENST00000479733 HMCN2Q8NDA2 5059 aa8.78□□□□□ -1
COL13A1-208ENST00000479733 KRTAP23-1A1A580 65 aa8.75□□□□□ -1.01
COL13A1-208ENST00000479733 FAT4Q6V0I7 4981 aa8.75□□□□□ -1.01
COL13A1-208ENST00000479733 LCE3AQ5TA76 89 aa8.59□□□□□ -1.03
COL13A1-208ENST00000479733 KRTAP19-1Q8IUB9 90 aa8.53□□□□□ -1.04
COL13A1-208ENST00000479733 UBR4Q5T4S7 5183 aa8.52□□□□□ -1.05
COL13A1-208ENST00000479733 RNF213Q63HN8 5207 aa8.51□□□□□ -1.05
COL13A1-208ENST00000479733 SPRR2GQ9BYE4 73 aa8.5□□□□□ -1.05
COL13A1-208ENST00000479733 M0R2T5 61 aa8.5□□□□□ -1.05
COL13A1-208ENST00000479733 LCE2CQ5TA81 110 aa8.44□□□□□ -1.06
COL13A1-208ENST00000479733 KRTAP10-10P60014 251 aa8.33□□□□□ -1.08
COL13A1-208ENST00000479733 MT1FP04733 61 aa8.26□□□□□ -1.09
COL13A1-208ENST00000479733 KRTAP8-1Q8IUC2 63 aa8.22□□□□□ -1.09
COL13A1-208ENST00000479733 PRO2289Q9P1D8 64 aa8.22□□□□□ -1.09
COL13A1-208ENST00000479733 MT1HP80294 61 aa8.21□□□□□ -1.1
COL13A1-208ENST00000479733 MT2AP02795 61 aa8.2□□□□□ -1.1
COL13A1-208ENST00000479733 KRTAP12-3P60328 96 aa8.12□□□□□ -1.11
COL13A1-208ENST00000479733 KRTAP10-5P60370 271 aa8.09□□□□□ -1.11
COL13A1-208ENST00000479733 KRTAP9-8Q9BYQ0 159 aa8.07□□□□□ -1.12
COL13A1-208ENST00000479733 MT1XP80297 61 aa8.07□□□□□ -1.12
COL13A1-208ENST00000479733 KRTAP10-12P60413 245 aa8.06□□□□□ -1.12
COL13A1-208ENST00000479733 INE1O15225 51 aa8.06□□□□□ -1.12
COL13A1-208ENST00000479733 MT1BP07438 61 aa8.02□□□□□ -1.13
COL13A1-208ENST00000479733 KRTAP19-8Q3LI54 63 aa8.01□□□□□ -1.13
COL13A1-208ENST00000479733 KRTAP10-7P60409 375 aaPredicted RBP7.98□□□□□ -1.13
COL13A1-208ENST00000479733 KMT2DO14686 5537 aa7.74□□□□□ -1.17
COL13A1-208ENST00000479733 KRTAP19-5Q3LI72 72 aa7.69□□□□□ -1.18
COL13A1-208ENST00000479733 KRTAP9-3Q9BYQ3 159 aa7.68□□□□□ -1.18
COL13A1-208ENST00000479733 USH2AO75445 5202 aa7.65□□□□□ -1.18
COL13A1-208ENST00000479733 LCE3CQ5T5A8 94 aa7.64□□□□□ -1.19
COL13A1-208ENST00000479733 KRTAP9-6A8MVA2 160 aa7.49□□□□□ -1.21
COL13A1-208ENST00000479733 LCE2AQ5TA79 106 aaPredicted RBP7.48□□□□□ -1.21
COL13A1-208ENST00000479733 KRTAP4-8A0A0G2JLE6 195 aa7.48□□□□□ -1.21
COL13A1-208ENST00000479733 KRTAP4-8Q9BYQ9 185 aa7.48□□□□□ -1.21
COL13A1-208ENST00000479733 LCE2BO14633 110 aa7.4□□□□□ -1.22
COL13A1-208ENST00000479733 KRTAP4-7Q9BYR0 210 aa7.38□□□□□ -1.23
COL13A1-208ENST00000479733 KRTAP2-3P0C7H8 128 aa7.2□□□□□ -1.26
COL13A1-208ENST00000479733 KRTAP2-4Q9BYR9 128 aa7.2□□□□□ -1.26
COL13A1-208ENST00000479733 KRTAP2-1Q9BYU5 128 aa7.2□□□□□ -1.26
COL13A1-208ENST00000479733 KRTAP19-7Q3SYF9 63 aa7.18□□□□□ -1.26
COL13A1-208ENST00000479733 FSIP2Q5CZC0 6907 aa7.07□□□□□ -1.28
COL13A1-208ENST00000479733 MT1LQ93083 61 aa7□□□□□ -1.29
COL13A1-208ENST00000479733 SSPOA2VEC9 5147 aa6.94□□□□□ -1.3
COL13A1-208ENST00000479733 MT1EP04732 61 aa6.93□□□□□ -1.3
COL13A1-208ENST00000479733 LOC100996750A0A140TA64 210 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms