RNA–Protein interactions for RNA: ENST00000478660.6

RUNX2-207, Transcript of runt related transcription factor 2, humanhuman

TSL 5

Gene RUNX2, Length 2,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX2-207ENST00000478660 KRTAP17-1Q9BYP8 105 aa12.23□□□□□ -0.45
RUNX2-207ENST00000478660 KRTAP25-1Q3LHN0 102 aa12.17□□□□□ -0.46
RUNX2-207ENST00000478660 HERC2O95714 4834 aa12.15□□□□□ -0.46
RUNX2-207ENST00000478660 FAT1Q14517 4588 aa12.13□□□□□ -0.47
RUNX2-207ENST00000478660 K7ERS5 55 aa12.1□□□□□ -0.47
RUNX2-207ENST00000478660 KRTAP4-5Q9BYR2 181 aa12.1□□□□□ -0.47
RUNX2-207ENST00000478660 FLG2Q5D862 2391 aaPredicted RBP12.03□□□□□ -0.48
RUNX2-207ENST00000478660 KRTAP3-3Q9BYR6 98 aa11.96□□□□□ -0.49
RUNX2-207ENST00000478660 KRTAP10-6P60371 365 aaPredicted RBP11.95□□□□□ -0.5
RUNX2-207ENST00000478660 FAT3Q8TDW7 4589 aa11.92□□□□□ -0.5
RUNX2-207ENST00000478660 RPL37P61927 97 aaKnown RBP11.9□□□□□ -0.5
RUNX2-207ENST00000478660 ROMO1P60602 79 aa11.87□□□□□ -0.51
RUNX2-207ENST00000478660 ABCA13Q86UQ4 5058 aa11.86□□□□□ -0.51
RUNX2-207ENST00000478660 KRTAP10-8P60410 259 aa11.85□□□□□ -0.51
RUNX2-207ENST00000478660 KRTAP3-2Q9BYR7 98 aa11.85□□□□□ -0.51
RUNX2-207ENST00000478660 KRTAP13-4Q3LI77 160 aa11.83□□□□□ -0.52
RUNX2-207ENST00000478660 CRIPTQ9P021 101 aa11.82□□□□□ -0.52
RUNX2-207ENST00000478660 S4R3F8 94 aa11.81□□□□□ -0.52
RUNX2-207ENST00000478660 TNXBP22105 4242 aa11.81□□□□□ -0.52
RUNX2-207ENST00000478660 XP32Q5T750 250 aa11.77□□□□□ -0.52
RUNX2-207ENST00000478660 LRP1Q07954 4544 aaKnown RBP11.73□□□□□ -0.53
RUNX2-207ENST00000478660 A0A0D9SG42 100 aa11.72□□□□□ -0.53
RUNX2-207ENST00000478660 H3BS24 57 aa11.72□□□□□ -0.53
RUNX2-207ENST00000478660 J3QL48 77 aa11.71□□□□□ -0.54
RUNX2-207ENST00000478660 PCLOQ9Y6V0 5065 aa11.7□□□□□ -0.54
RUNX2-207ENST00000478660 DMBT1Q9UGM3 2413 aaPredicted RBP11.69□□□□□ -0.54
RUNX2-207ENST00000478660 MT1HL1P0DM35 61 aa11.69□□□□□ -0.54
RUNX2-207ENST00000478660 MYCBP2O75592 4640 aa11.66□□□□□ -0.54
RUNX2-207ENST00000478660 P0C880 135 aa11.64□□□□□ -0.55
RUNX2-207ENST00000478660 TPRXLQ17RH7 258 aa11.57□□□□□ -0.56
RUNX2-207ENST00000478660 KRTAP12-2P59991 146 aa11.47□□□□□ -0.57
RUNX2-207ENST00000478660 KRTAP12-1P59990 96 aa11.41□□□□□ -0.58
RUNX2-207ENST00000478660 C10orf95Q9H7T3 257 aa11.4□□□□□ -0.58
RUNX2-207ENST00000478660 SPINT4Q6UDR6 99 aa11.35□□□□□ -0.59
RUNX2-207ENST00000478660 M0QZ58 72 aa11.34□□□□□ -0.59
RUNX2-207ENST00000478660 HERC1Q15751 4861 aa11.19□□□□□ -0.62
RUNX2-207ENST00000478660 KRTAP15-1Q3LI76 137 aa11.17□□□□□ -0.62
RUNX2-207ENST00000478660 LPAP08519 4548 aa11.15□□□□□ -0.62
RUNX2-207ENST00000478660 LRP2P98164 4655 aa11.09□□□□□ -0.63
RUNX2-207ENST00000478660 HMCN2Q8NDA2 5059 aa11.02□□□□□ -0.65
RUNX2-207ENST00000478660 R4GN34 69 aa10.95□□□□□ -0.66
RUNX2-207ENST00000478660 NDUFAF8A1L188 74 aa10.9□□□□□ -0.66
RUNX2-207ENST00000478660 SEC61BP60468 96 aaKnown RBP10.81□□□□□ -0.68
RUNX2-207ENST00000478660 LORP23490 312 aaPredicted RBP10.75□□□□□ -0.69
RUNX2-207ENST00000478660 MUC17Q685J3 4493 aa10.73□□□□□ -0.69
RUNX2-207ENST00000478660 KRTAP4-1Q9BYQ7 146 aa10.64□□□□□ -0.71
RUNX2-207ENST00000478660 UBR4Q5T4S7 5183 aa10.56□□□□□ -0.72
RUNX2-207ENST00000478660 PLAC4Q8WY50 150 aa10.56□□□□□ -0.72
RUNX2-207ENST00000478660 KRTAP19-2Q3LHN2 52 aa10.55□□□□□ -0.72
RUNX2-207ENST00000478660 PP632Q6XCG6 107 aa10.47□□□□□ -0.73
RUNX2-207ENST00000478660 CAMK2N1Q7Z7J9 78 aa10.41□□□□□ -0.74
RUNX2-207ENST00000478660 RNF213Q63HN8 5207 aa10.4□□□□□ -0.74
RUNX2-207ENST00000478660 MUC2Q02817 5179 aa10.19□□□□□ -0.78
RUNX2-207ENST00000478660 FLGP20930 4061 aaPredicted RBP10.16□□□□□ -0.78
RUNX2-207ENST00000478660 LUZP6Q538Z0 58 aa10.11□□□□□ -0.79
RUNX2-207ENST00000478660 KRTAP23-1A1A580 65 aa10.11□□□□□ -0.79
RUNX2-207ENST00000478660 TNP1P09430 55 aa10.1□□□□□ -0.79
RUNX2-207ENST00000478660 LCE2CQ5TA81 110 aa10.04□□□□□ -0.8
RUNX2-207ENST00000478660 FAT4Q6V0I7 4981 aa9.96□□□□□ -0.81
RUNX2-207ENST00000478660 LCE2AQ5TA79 106 aaPredicted RBP9.9□□□□□ -0.82
RUNX2-207ENST00000478660 MT1HP80294 61 aa9.89□□□□□ -0.83
RUNX2-207ENST00000478660 SPRR5A0A1B0GTR4 108 aa9.87□□□□□ -0.83
RUNX2-207ENST00000478660 SPRR2GQ9BYE4 73 aa9.82□□□□□ -0.84
RUNX2-207ENST00000478660 M0R2T5 61 aa9.78□□□□□ -0.84
RUNX2-207ENST00000478660 A0A0A0MQY5 61 aa9.77□□□□□ -0.85
RUNX2-207ENST00000478660 KRTAP19-1Q8IUB9 90 aa9.72□□□□□ -0.85
RUNX2-207ENST00000478660 LCE3AQ5TA76 89 aa9.51□□□□□ -0.89
RUNX2-207ENST00000478660 KRTAP9-8Q9BYQ0 159 aa9.43□□□□□ -0.9
RUNX2-207ENST00000478660 MT2AP02795 61 aa9.42□□□□□ -0.9
RUNX2-207ENST00000478660 MT1FP04733 61 aa9.42□□□□□ -0.9
RUNX2-207ENST00000478660 KRTAP10-10P60014 251 aa9.38□□□□□ -0.91
RUNX2-207ENST00000478660 KRTAP19-8Q3LI54 63 aa9.35□□□□□ -0.91
RUNX2-207ENST00000478660 KRTAP8-1Q8IUC2 63 aa9.33□□□□□ -0.92
RUNX2-207ENST00000478660 LCE2DQ5TA82 110 aaPredicted RBP9.25□□□□□ -0.93
RUNX2-207ENST00000478660 KRTAP10-5P60370 271 aa9.2□□□□□ -0.94
RUNX2-207ENST00000478660 MT1BP07438 61 aa9.19□□□□□ -0.94
RUNX2-207ENST00000478660 MT1XP80297 61 aa9.17□□□□□ -0.94
RUNX2-207ENST00000478660 KRTAP9-2Q9BYQ4 174 aa9.15□□□□□ -0.95
RUNX2-207ENST00000478660 KRTAP9-3Q9BYQ3 159 aa9.13□□□□□ -0.95
RUNX2-207ENST00000478660 KRTAP10-12P60413 245 aa9.07□□□□□ -0.96
RUNX2-207ENST00000478660 KRTAP12-3P60328 96 aa9.06□□□□□ -0.96
RUNX2-207ENST00000478660 LCE2BO14633 110 aa8.94□□□□□ -0.98
RUNX2-207ENST00000478660 KRTAP10-7P60409 375 aaPredicted RBP8.91□□□□□ -0.98
RUNX2-207ENST00000478660 PRO2289Q9P1D8 64 aa8.88□□□□□ -0.99
RUNX2-207ENST00000478660 INE1O15225 51 aa8.87□□□□□ -0.99
RUNX2-207ENST00000478660 USH2AO75445 5202 aa8.75□□□□□ -1.01
RUNX2-207ENST00000478660 CRCT1Q9UGL9 99 aa8.74□□□□□ -1.01
RUNX2-207ENST00000478660 KRTAP9-6A0A140TA67 174 aa8.66□□□□□ -1.02
RUNX2-207ENST00000478660 FSIP2Q5CZC0 6907 aa8.64□□□□□ -1.03
RUNX2-207ENST00000478660 KRTAP19-5Q3LI72 72 aa8.59□□□□□ -1.03
RUNX2-207ENST00000478660 KRTAP19-6Q3LI70 58 aa8.58□□□□□ -1.04
RUNX2-207ENST00000478660 LCE3CQ5T5A8 94 aa8.55□□□□□ -1.04
RUNX2-207ENST00000478660 SSPOA2VEC9 5147 aa8.54□□□□□ -1.04
RUNX2-207ENST00000478660 FCGBPQ9Y6R7 5405 aaPredicted RBP8.3□□□□□ -1.08
RUNX2-207ENST00000478660 KRTAP4-8A0A0G2JLE6 195 aa8.27□□□□□ -1.09
RUNX2-207ENST00000478660 KRTAP4-8Q9BYQ9 185 aa8.27□□□□□ -1.09
RUNX2-207ENST00000478660 KRTAP9-6A8MVA2 160 aa8.24□□□□□ -1.09
RUNX2-207ENST00000478660 KRTAP19-7Q3SYF9 63 aa8.17□□□□□ -1.1
RUNX2-207ENST00000478660 KMT2DO14686 5537 aa8.14□□□□□ -1.11
RUNX2-207ENST00000478660 KRTAP19-4Q3LI73 84 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms