RNA–Protein interactions for RNA: ENST00000478080.5

CDHR3-211, Transcript of cadherin related family member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDHR3, Length 2,633 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-211ENST00000478080 SPATA8Q6RVD6 105 aa4.68□□□□□ -1.66
CDHR3-211ENST00000478080 ADM2Q7Z4H4 148 aa4.68□□□□□ -1.66
CDHR3-211ENST00000478080 PRAC1Q96KF2 57 aa4.67□□□□□ -1.66
CDHR3-211ENST00000478080 XP32Q5T750 250 aa4.66□□□□□ -1.66
CDHR3-211ENST00000478080 MIR22HGQ0VDD5 57 aa4.65□□□□□ -1.66
CDHR3-211ENST00000478080 UQCR11O14957 56 aa4.65□□□□□ -1.67
CDHR3-211ENST00000478080 KRTAP4-5Q9BYR2 181 aa4.65□□□□□ -1.67
CDHR3-211ENST00000478080 LPAP08519 4548 aa4.64□□□□□ -1.67
CDHR3-211ENST00000478080 RPL37P61927 97 aaKnown RBP4.64□□□□□ -1.67
CDHR3-211ENST00000478080 ABCA13Q86UQ4 5058 aa4.62□□□□□ -1.67
CDHR3-211ENST00000478080 COX6B2Q6YFQ2 88 aa4.61□□□□□ -1.67
CDHR3-211ENST00000478080 LRP2P98164 4655 aa4.58□□□□□ -1.68
CDHR3-211ENST00000478080 J3QL48 77 aa4.57□□□□□ -1.68
CDHR3-211ENST00000478080 LINC01554Q52M75 96 aa4.55□□□□□ -1.68
CDHR3-211ENST00000478080 H3BS24 57 aa4.53□□□□□ -1.68
CDHR3-211ENST00000478080 CSAG1Q6PB30 78 aa4.51□□□□□ -1.69
CDHR3-211ENST00000478080 H0YAA0 97 aa4.51□□□□□ -1.69
CDHR3-211ENST00000478080 TPRXLQ17RH7 258 aa4.5□□□□□ -1.69
CDHR3-211ENST00000478080 A0A1B0GU33 70 aa4.48□□□□□ -1.69
CDHR3-211ENST00000478080 H1FX-AS1Q4G0G2 97 aa4.47□□□□□ -1.69
CDHR3-211ENST00000478080 S4R3F8 94 aa4.47□□□□□ -1.69
CDHR3-211ENST00000478080 HERC2O95714 4834 aa4.45□□□□□ -1.7
CDHR3-211ENST00000478080 A0A0A0MQY5 61 aa4.44□□□□□ -1.7
CDHR3-211ENST00000478080 CRIPTQ9P021 101 aa4.43□□□□□ -1.7
CDHR3-211ENST00000478080 KRTAP10-6P60371 365 aaPredicted RBP4.43□□□□□ -1.7
CDHR3-211ENST00000478080 P0C880 135 aa4.39□□□□□ -1.71
CDHR3-211ENST00000478080 KRTAP13-4Q3LI77 160 aa4.39□□□□□ -1.71
CDHR3-211ENST00000478080 BIRC6Q9NR09 4857 aa4.38□□□□□ -1.71
CDHR3-211ENST00000478080 KRTAP25-1Q3LHN0 102 aa4.38□□□□□ -1.71
CDHR3-211ENST00000478080 KRTAP4-1Q9BYQ7 146 aa4.37□□□□□ -1.71
CDHR3-211ENST00000478080 MUC2Q02817 5179 aa4.35□□□□□ -1.71
CDHR3-211ENST00000478080 MUC17Q685J3 4493 aa4.35□□□□□ -1.71
CDHR3-211ENST00000478080 A0A0D9SG42 100 aa4.35□□□□□ -1.71
CDHR3-211ENST00000478080 SEC61BP60468 96 aaKnown RBP4.34□□□□□ -1.72
CDHR3-211ENST00000478080 PCLOQ9Y6V0 5065 aa4.32□□□□□ -1.72
CDHR3-211ENST00000478080 K7ERS5 55 aa4.31□□□□□ -1.72
CDHR3-211ENST00000478080 HERC1Q15751 4861 aa4.28□□□□□ -1.72
CDHR3-211ENST00000478080 ROMO1P60602 79 aa4.27□□□□□ -1.73
CDHR3-211ENST00000478080 KRTAP19-2Q3LHN2 52 aa4.24□□□□□ -1.73
CDHR3-211ENST00000478080 KRTAP12-2P59991 146 aa4.22□□□□□ -1.73
CDHR3-211ENST00000478080 C10orf95Q9H7T3 257 aa4.22□□□□□ -1.73
CDHR3-211ENST00000478080 SPINT4Q6UDR6 99 aa4.2□□□□□ -1.74
CDHR3-211ENST00000478080 HMCN2Q8NDA2 5059 aa4.2□□□□□ -1.74
CDHR3-211ENST00000478080 LORP23490 312 aaPredicted RBP4.19□□□□□ -1.74
CDHR3-211ENST00000478080 KRTAP12-1P59990 96 aa4.18□□□□□ -1.74
CDHR3-211ENST00000478080 M0QZ58 72 aa4.17□□□□□ -1.74
CDHR3-211ENST00000478080 LCE2BO14633 110 aa4.14□□□□□ -1.75
CDHR3-211ENST00000478080 R4GN34 69 aa4.14□□□□□ -1.75
CDHR3-211ENST00000478080 FAT4Q6V0I7 4981 aa4.11□□□□□ -1.75
CDHR3-211ENST00000478080 FLGP20930 4061 aaPredicted RBP4.1□□□□□ -1.75
CDHR3-211ENST00000478080 RNF213Q63HN8 5207 aa4.07□□□□□ -1.76
CDHR3-211ENST00000478080 UBR4Q5T4S7 5183 aa4.07□□□□□ -1.76
CDHR3-211ENST00000478080 LCE2CQ5TA81 110 aa4.05□□□□□ -1.76
CDHR3-211ENST00000478080 KRTAP15-1Q3LI76 137 aa4.02□□□□□ -1.77
CDHR3-211ENST00000478080 NDUFAF8A1L188 74 aa3.96□□□□□ -1.77
CDHR3-211ENST00000478080 LCE2AQ5TA79 106 aaPredicted RBP3.95□□□□□ -1.78
CDHR3-211ENST00000478080 M0R2T5 61 aa3.94□□□□□ -1.78
CDHR3-211ENST00000478080 MT1HP80294 61 aa3.94□□□□□ -1.78
CDHR3-211ENST00000478080 CAMK2N1Q7Z7J9 78 aa3.91□□□□□ -1.78
CDHR3-211ENST00000478080 KRTAP19-1Q8IUB9 90 aa3.86□□□□□ -1.79
CDHR3-211ENST00000478080 MT1FP04733 61 aa3.85□□□□□ -1.79
CDHR3-211ENST00000478080 MT2AP02795 61 aa3.85□□□□□ -1.79
CDHR3-211ENST00000478080 KRTAP9-8Q9BYQ0 159 aa3.84□□□□□ -1.8
CDHR3-211ENST00000478080 KRTAP10-10P60014 251 aa3.83□□□□□ -1.8
CDHR3-211ENST00000478080 SPRR2GQ9BYE4 73 aa3.83□□□□□ -1.8
CDHR3-211ENST00000478080 PLAC4Q8WY50 150 aa3.78□□□□□ -1.8
CDHR3-211ENST00000478080 TNP1P09430 55 aa3.73□□□□□ -1.81
CDHR3-211ENST00000478080 LUZP6Q538Z0 58 aa3.71□□□□□ -1.82
CDHR3-211ENST00000478080 PP632Q6XCG6 107 aa3.71□□□□□ -1.82
CDHR3-211ENST00000478080 KRTAP19-8Q3LI54 63 aa3.69□□□□□ -1.82
CDHR3-211ENST00000478080 MT1BP07438 61 aa3.68□□□□□ -1.82
CDHR3-211ENST00000478080 KRTAP9-3Q9BYQ3 159 aa3.67□□□□□ -1.82
CDHR3-211ENST00000478080 USH2AO75445 5202 aa3.63□□□□□ -1.83
CDHR3-211ENST00000478080 KRTAP10-5P60370 271 aa3.62□□□□□ -1.83
CDHR3-211ENST00000478080 MT1XP80297 61 aa3.62□□□□□ -1.83
CDHR3-211ENST00000478080 LCE3AQ5TA76 89 aa3.6□□□□□ -1.83
CDHR3-211ENST00000478080 KRTAP23-1A1A580 65 aa3.59□□□□□ -1.83
CDHR3-211ENST00000478080 KMT2DO14686 5537 aa3.54□□□□□ -1.84
CDHR3-211ENST00000478080 KRTAP10-7P60409 375 aaPredicted RBP3.53□□□□□ -1.84
CDHR3-211ENST00000478080 SPRR5A0A1B0GTR4 108 aa3.52□□□□□ -1.85
CDHR3-211ENST00000478080 KRTAP10-12P60413 245 aa3.48□□□□□ -1.85
CDHR3-211ENST00000478080 KRTAP8-1Q8IUC2 63 aa3.46□□□□□ -1.86
CDHR3-211ENST00000478080 PRO2289Q9P1D8 64 aa3.45□□□□□ -1.86
CDHR3-211ENST00000478080 KRTAP12-3P60328 96 aa3.41□□□□□ -1.86
CDHR3-211ENST00000478080 FSIP2Q5CZC0 6907 aa3.39□□□□□ -1.87
CDHR3-211ENST00000478080 KRTAP4-8A0A0G2JLE6 195 aa3.37□□□□□ -1.87
CDHR3-211ENST00000478080 KRTAP4-8Q9BYQ9 185 aa3.37□□□□□ -1.87
CDHR3-211ENST00000478080 LOC100996750A0A140TA64 210 aa3.35□□□□□ -1.87
CDHR3-211ENST00000478080 KRTAP19-5Q3LI72 72 aa3.35□□□□□ -1.87
CDHR3-211ENST00000478080 KRTAP4-6Q9BYQ5 205 aa3.35□□□□□ -1.87
CDHR3-211ENST00000478080 SSPOA2VEC9 5147 aa3.32□□□□□ -1.88
CDHR3-211ENST00000478080 KRTAP19-7Q3SYF9 63 aa3.23□□□□□ -1.89
CDHR3-211ENST00000478080 KRTAP19-6Q3LI70 58 aa3.21□□□□□ -1.9
CDHR3-211ENST00000478080 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
CDHR3-211ENST00000478080 KRTAP4-7Q9BYR0 210 aa3.18□□□□□ -1.9
CDHR3-211ENST00000478080 INE1O15225 51 aa3.17□□□□□ -1.9
CDHR3-211ENST00000478080 KRTAP9-6A8MVA2 160 aa3.13□□□□□ -1.91
CDHR3-211ENST00000478080 MT1EP04732 61 aa3.13□□□□□ -1.91
CDHR3-211ENST00000478080 FCGBPQ9Y6R7 5405 aaPredicted RBP3.13□□□□□ -1.91
CDHR3-211ENST00000478080 MT1LQ93083 61 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms