RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 NBEAQ8NFP9 2946 aa0.22□□□□□ -2.37
TARDBP-208ENST00000477447 AKAP9Q99996 3911 aa0.22□□□□□ -2.37
TARDBP-208ENST00000477447 DNAH10Q8IVF4 4471 aa0.22□□□□□ -2.37
TARDBP-208ENST00000477447 NAV2Q8IVL1 2488 aa0.22□□□□□ -2.37
TARDBP-208ENST00000477447 PLECQ15149 4684 aaKnown RBP0.21□□□□□ -2.38
TARDBP-208ENST00000477447 HTTP42858 3142 aa0.21□□□□□ -2.38
TARDBP-208ENST00000477447 RIF1Q5UIP0 2472 aaKnown RBP0.21□□□□□ -2.38
TARDBP-208ENST00000477447 DNAH17Q9UFH2 4485 aa0.21□□□□□ -2.38
TARDBP-208ENST00000477447 MT1AP04731 61 aa0.21□□□□□ -2.38
TARDBP-208ENST00000477447 KRTAP6-2Q3LI66 62 aa0.21□□□□□ -2.38
TARDBP-208ENST00000477447 KRTAP19-5Q3LI72 72 aa0.21□□□□□ -2.38
TARDBP-208ENST00000477447 RPL39P5Q59GN2 51 aa0.21□□□□□ -2.38
TARDBP-208ENST00000477447 FLGP20930 4061 aaPredicted RBP0.21□□□□□ -2.38
TARDBP-208ENST00000477447 COL6A3P12111 3177 aa0.21□□□□□ -2.38
TARDBP-208ENST00000477447 MAP1AP78559 2803 aaPredicted RBP0.21□□□□□ -2.38
TARDBP-208ENST00000477447 FASNP49327 2511 aaKnown RBP0.21□□□□□ -2.38
TARDBP-208ENST00000477447 DNAH1Q9P2D7 4330 aa0.21□□□□□ -2.38
TARDBP-208ENST00000477447 DNAH7Q8WXX0 4024 aa0.21□□□□□ -2.38
TARDBP-208ENST00000477447 COL7A1Q02388 2944 aa0.2□□□□□ -2.38
TARDBP-208ENST00000477447 MAST4O15021 2626 aa0.2□□□□□ -2.38
TARDBP-208ENST00000477447 TRRAPQ9Y4A5 3859 aa0.2□□□□□ -2.38
TARDBP-208ENST00000477447 SPRR2AP35326 72 aa0.2□□□□□ -2.38
TARDBP-208ENST00000477447 DEFB110Q30KQ9 67 aa0.2□□□□□ -2.38
TARDBP-208ENST00000477447 ACANP16112 2415 aa0.2□□□□□ -2.38
TARDBP-208ENST00000477447 CELSR3Q9NYQ7 3312 aa0.2□□□□□ -2.38
TARDBP-208ENST00000477447 CFAP54Q96N23 3096 aa0.2□□□□□ -2.38
TARDBP-208ENST00000477447 FRYQ5TBA9 3013 aa0.2□□□□□ -2.38
TARDBP-208ENST00000477447 MGAQ8IWI9 3026 aa0.2□□□□□ -2.38
TARDBP-208ENST00000477447 LRP1BQ9NZR2 4599 aa0.2□□□□□ -2.38
TARDBP-208ENST00000477447 SYNE2Q8WXH0 6885 aaKnown RBP0.2□□□□□ -2.38
TARDBP-208ENST00000477447 DCHS2Q6V1P9 2916 aa0.2□□□□□ -2.38
TARDBP-208ENST00000477447 LAMA1P25391 3075 aa0.19□□□□□ -2.38
TARDBP-208ENST00000477447 SONP18583 2426 aaKnown RBP0.19□□□□□ -2.38
TARDBP-208ENST00000477447 MXRA5Q9NR99 2828 aa0.19□□□□□ -2.38
TARDBP-208ENST00000477447 SPTBN4Q9H254 2564 aa0.19□□□□□ -2.38
TARDBP-208ENST00000477447 TGP01266 2768 aa0.19□□□□□ -2.38
TARDBP-208ENST00000477447 TEX15Q9BXT5 2789 aa0.19□□□□□ -2.38
TARDBP-208ENST00000477447 SMR3BP02814 79 aaPredicted RBP0.19□□□□□ -2.38
TARDBP-208ENST00000477447 SPART-AS1P0CW21 52 aa0.19□□□□□ -2.38
TARDBP-208ENST00000477447 MYO18BQ8IUG5 2567 aa0.19□□□□□ -2.38
TARDBP-208ENST00000477447 MUC3AQ02505 3323 aa0.19□□□□□ -2.38
TARDBP-208ENST00000477447 DYNC1H1Q14204 4646 aaKnown RBP0.19□□□□□ -2.38
TARDBP-208ENST00000477447 MTORP42345 2549 aa0.19□□□□□ -2.38
TARDBP-208ENST00000477447 VPS13CQ709C8 3753 aa0.19□□□□□ -2.38
TARDBP-208ENST00000477447 FAT1Q14517 4588 aa0.18□□□□□ -2.38
TARDBP-208ENST00000477447 FAM186AA6NE01 2351 aa0.18□□□□□ -2.38
TARDBP-208ENST00000477447 MUC17Q685J3 4493 aa0.18□□□□□ -2.38
TARDBP-208ENST00000477447 DMDP11532 3685 aa0.18□□□□□ -2.38
TARDBP-208ENST00000477447 DEFB108AA8MXU0 73 aa0.18□□□□□ -2.38
TARDBP-208ENST00000477447 DMXL2Q8TDJ6 3036 aa0.18□□□□□ -2.38
TARDBP-208ENST00000477447 FAT4Q6V0I7 4981 aa0.18□□□□□ -2.38
TARDBP-208ENST00000477447 LRRK2Q5S007 2527 aa0.18□□□□□ -2.38
TARDBP-208ENST00000477447 ACACAQ13085 2346 aa0.18□□□□□ -2.38
TARDBP-208ENST00000477447 CMYA5Q8N3K9 4069 aa0.18□□□□□ -2.38
TARDBP-208ENST00000477447 COL6A5A8TX70 2615 aa0.17□□□□□ -2.38
TARDBP-208ENST00000477447 IGSF10Q6WRI0 2623 aa0.17□□□□□ -2.38
TARDBP-208ENST00000477447 ATMQ13315 3056 aa0.17□□□□□ -2.38
TARDBP-208ENST00000477447 SPRR2FQ96RM1 72 aa0.17□□□□□ -2.38
TARDBP-208ENST00000477447 FSIP2Q5CZC0 6907 aa0.17□□□□□ -2.38
TARDBP-208ENST00000477447 LAMA3Q16787 3333 aa0.17□□□□□ -2.38
TARDBP-208ENST00000477447 LRBAP50851 2863 aa0.17□□□□□ -2.38
TARDBP-208ENST00000477447 ITPR2Q14571 2701 aa0.17□□□□□ -2.38
TARDBP-208ENST00000477447 USP9XQ93008 2570 aaPredicted RBP0.17□□□□□ -2.38
TARDBP-208ENST00000477447 MGAM2Q2M2H8 2515 aa0.16□□□□□ -2.38
TARDBP-208ENST00000477447 LRP2P98164 4655 aa0.16□□□□□ -2.38
TARDBP-208ENST00000477447 FLNAP21333 2647 aaKnown RBP0.16□□□□□ -2.38
TARDBP-208ENST00000477447 FRYLO94915 3013 aa0.16□□□□□ -2.38
TARDBP-208ENST00000477447 SZT2Q5T011 3432 aa0.16□□□□□ -2.38
TARDBP-208ENST00000477447 H3BUX3 64 aa0.16□□□□□ -2.38
TARDBP-208ENST00000477447 SPRR2EP22531 72 aa0.16□□□□□ -2.38
TARDBP-208ENST00000477447 ACACBO00763 2458 aa0.16□□□□□ -2.38
TARDBP-208ENST00000477447 NBEAL1Q6ZS30 2694 aa0.16□□□□□ -2.38
TARDBP-208ENST00000477447 DNAH5Q8TE73 4624 aa0.16□□□□□ -2.38
TARDBP-208ENST00000477447 WDFY4Q6ZS81 3184 aa0.16□□□□□ -2.38
TARDBP-208ENST00000477447 C5orf42Q9H799 3197 aa0.16□□□□□ -2.38
TARDBP-208ENST00000477447 MKI67P46013 3256 aaKnown RBP0.16□□□□□ -2.38
TARDBP-208ENST00000477447 CEP250Q9BV73 2442 aa0.15□□□□□ -2.39
TARDBP-208ENST00000477447 DEFB1P60022 68 aa0.15□□□□□ -2.39
TARDBP-208ENST00000477447 DEFB124Q8NES8 71 aa0.15□□□□□ -2.39
TARDBP-208ENST00000477447 SPG11Q96JI7 2443 aa0.15□□□□□ -2.39
TARDBP-208ENST00000477447 TLN2Q9Y4G6 2542 aa0.14□□□□□ -2.39
TARDBP-208ENST00000477447 HERC1Q15751 4861 aa0.14□□□□□ -2.39
TARDBP-208ENST00000477447 DNAH12Q6ZR08 3092 aa0.14□□□□□ -2.39
TARDBP-208ENST00000477447 BOD1L1Q8NFC6 3051 aa0.14□□□□□ -2.39
TARDBP-208ENST00000477447 A0A096LNI7 61 aa0.14□□□□□ -2.39
TARDBP-208ENST00000477447 RHPN1-AS1Q9BWJ2 59 aa0.14□□□□□ -2.39
TARDBP-208ENST00000477447 SSPOA2VEC9 5147 aa0.14□□□□□ -2.39
TARDBP-208ENST00000477447 HMCN2Q8NDA2 5059 aa0.14□□□□□ -2.39
TARDBP-208ENST00000477447 ADGRG4Q8IZF6 3080 aa0.13□□□□□ -2.39
TARDBP-208ENST00000477447 APELAP0DMC3 54 aa0.13□□□□□ -2.39
TARDBP-208ENST00000477447 PRUNE2Q8WUY3 3088 aa0.13□□□□□ -2.39
TARDBP-208ENST00000477447 CSMD2Q7Z408 3487 aa0.12□□□□□ -2.39
TARDBP-208ENST00000477447 USP34Q70CQ2 3546 aa0.12□□□□□ -2.39
TARDBP-208ENST00000477447 DEFB136Q30KP8 78 aa0.12□□□□□ -2.39
TARDBP-208ENST00000477447 WDFY3Q8IZQ1 3526 aa0.12□□□□□ -2.39
TARDBP-208ENST00000477447 STAB2Q8WWQ8 2551 aa0.12□□□□□ -2.39
TARDBP-208ENST00000477447 CEP295Q9C0D2 2601 aa0.12□□□□□ -2.39
TARDBP-208ENST00000477447 MYO15AQ9UKN7 3530 aa0.12□□□□□ -2.39
TARDBP-208ENST00000477447 DOPEY1Q5JWR5 2465 aa0.11□□□□□ -2.39
TARDBP-208ENST00000477447 CFAP46Q8IYW2 2715 aa0.11□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 89 ms