RNA–Protein interactions for RNA: ENST00000477126.1

TMEM42-202, Transcript of transmembrane protein 42, humanhuman

TSL 1 (best)

Gene TMEM42, Length 3,071 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM42-202ENST00000477126 FAT1Q14517 4588 aa11.27□□□□□ -0.6
TMEM42-202ENST00000477126 S4R3F8 94 aa11.26□□□□□ -0.61
TMEM42-202ENST00000477126 MYCBP2O75592 4640 aa11.21□□□□□ -0.62
TMEM42-202ENST00000477126 PKHD1P08F94 4074 aa11.21□□□□□ -0.62
TMEM42-202ENST00000477126 KRTAP3-3Q9BYR6 98 aa11.18□□□□□ -0.62
TMEM42-202ENST00000477126 KRTAP3-2Q9BYR7 98 aa11.18□□□□□ -0.62
TMEM42-202ENST00000477126 A0A0A0MQY5 61 aa11.17□□□□□ -0.62
TMEM42-202ENST00000477126 KRTAP10-8P60410 259 aa11.12□□□□□ -0.63
TMEM42-202ENST00000477126 DYNC1H1Q14204 4646 aaKnown RBP10.98□□□□□ -0.65
TMEM42-202ENST00000477126 KRTAP12-1P59990 96 aa10.98□□□□□ -0.65
TMEM42-202ENST00000477126 HSPG2P98160 4391 aa10.93□□□□□ -0.66
TMEM42-202ENST00000477126 SACSQ9NZJ4 4579 aa10.92□□□□□ -0.66
TMEM42-202ENST00000477126 RPS29P62273 56 aaKnown RBP10.89□□□□□ -0.67
TMEM42-202ENST00000477126 APOBP04114 4563 aaKnown RBP10.88□□□□□ -0.67
TMEM42-202ENST00000477126 LRP1Q07954 4544 aaKnown RBP10.87□□□□□ -0.67
TMEM42-202ENST00000477126 LUZP6Q538Z0 58 aa10.86□□□□□ -0.67
TMEM42-202ENST00000477126 XP32Q5T750 250 aa10.79□□□□□ -0.68
TMEM42-202ENST00000477126 LPAP08519 4548 aa10.7□□□□□ -0.7
TMEM42-202ENST00000477126 PLAC4Q8WY50 150 aa10.69□□□□□ -0.7
TMEM42-202ENST00000477126 M0QZ58 72 aa10.66□□□□□ -0.7
TMEM42-202ENST00000477126 FAT3Q8TDW7 4589 aa10.63□□□□□ -0.71
TMEM42-202ENST00000477126 KMT2CQ8NEZ4 4911 aaKnown RBP10.61□□□□□ -0.71
TMEM42-202ENST00000477126 PKHD1L1Q86WI1 4243 aa10.57□□□□□ -0.72
TMEM42-202ENST00000477126 KRTAP10-4P60372 401 aaPredicted RBP10.52□□□□□ -0.73
TMEM42-202ENST00000477126 R4GN34 69 aa10.52□□□□□ -0.73
TMEM42-202ENST00000477126 RYR2Q92736 4967 aa10.5□□□□□ -0.73
TMEM42-202ENST00000477126 LRP2P98164 4655 aa10.46□□□□□ -0.73
TMEM42-202ENST00000477126 A0A1B0GVY2 172 aa10.39□□□□□ -0.75
TMEM42-202ENST00000477126 LORP23490 312 aaPredicted RBP10.35□□□□□ -0.75
TMEM42-202ENST00000477126 TNXBP22105 4242 aa10.31□□□□□ -0.76
TMEM42-202ENST00000477126 RYR3Q15413 4870 aa10.23□□□□□ -0.77
TMEM42-202ENST00000477126 CAMK2N1Q7Z7J9 78 aa10.22□□□□□ -0.77
TMEM42-202ENST00000477126 Q5VSD8 79 aa10.17□□□□□ -0.78
TMEM42-202ENST00000477126 RYR1P21817 5038 aa10.13□□□□□ -0.79
TMEM42-202ENST00000477126 KRTAP21-3Q3LHN1 58 aa10.13□□□□□ -0.79
TMEM42-202ENST00000477126 KRTAP17-1Q9BYP8 105 aa10.11□□□□□ -0.79
TMEM42-202ENST00000477126 KIAA1109Q2LD37 5005 aa10.09□□□□□ -0.79
TMEM42-202ENST00000477126 EPPK1P58107 5090 aaKnown RBP9.89□□□□□ -0.83
TMEM42-202ENST00000477126 ABCA13Q86UQ4 5058 aa9.85□□□□□ -0.83
TMEM42-202ENST00000477126 MT1HL1P0DM35 61 aa9.78□□□□□ -0.84
TMEM42-202ENST00000477126 PP632Q6XCG6 107 aa9.76□□□□□ -0.85
TMEM42-202ENST00000477126 MUC2Q02817 5179 aa9.76□□□□□ -0.85
TMEM42-202ENST00000477126 TNP1P09430 55 aa9.61□□□□□ -0.87
TMEM42-202ENST00000477126 KRTAP4-1Q9BYQ7 146 aa9.59□□□□□ -0.87
TMEM42-202ENST00000477126 KRTAP4-5Q9BYR2 181 aa9.54□□□□□ -0.88
TMEM42-202ENST00000477126 SEC61BP60468 96 aaKnown RBP9.4□□□□□ -0.9
TMEM42-202ENST00000477126 MUC17Q685J3 4493 aa9.39□□□□□ -0.91
TMEM42-202ENST00000477126 SPRR5A0A1B0GTR4 108 aa9.29□□□□□ -0.92
TMEM42-202ENST00000477126 HERC2O95714 4834 aa9.24□□□□□ -0.93
TMEM42-202ENST00000477126 FAT4Q6V0I7 4981 aa9.21□□□□□ -0.93
TMEM42-202ENST00000477126 PRO2289Q9P1D8 64 aa9.2□□□□□ -0.94
TMEM42-202ENST00000477126 PCLOQ9Y6V0 5065 aa9.17□□□□□ -0.94
TMEM42-202ENST00000477126 LCE3AQ5TA76 89 aa9.16□□□□□ -0.94
TMEM42-202ENST00000477126 J3QL48 77 aa9.07□□□□□ -0.96
TMEM42-202ENST00000477126 KRTAP19-2Q3LHN2 52 aa9.06□□□□□ -0.96
TMEM42-202ENST00000477126 HERC1Q15751 4861 aa8.99□□□□□ -0.97
TMEM42-202ENST00000477126 FLGP20930 4061 aaPredicted RBP8.87□□□□□ -0.99
TMEM42-202ENST00000477126 KRTAP23-1A1A580 65 aa8.87□□□□□ -0.99
TMEM42-202ENST00000477126 M0R2T5 61 aa8.87□□□□□ -0.99
TMEM42-202ENST00000477126 HMCN2Q8NDA2 5059 aa8.87□□□□□ -0.99
TMEM42-202ENST00000477126 INE1O15225 51 aa8.8□□□□□ -1
TMEM42-202ENST00000477126 BIRC6Q9NR09 4857 aa8.79□□□□□ -1
TMEM42-202ENST00000477126 RNF213Q63HN8 5207 aa8.74□□□□□ -1.01
TMEM42-202ENST00000477126 KRTAP19-1Q8IUB9 90 aa8.69□□□□□ -1.02
TMEM42-202ENST00000477126 UBR4Q5T4S7 5183 aa8.62□□□□□ -1.03
TMEM42-202ENST00000477126 KRTAP10-10P60014 251 aa8.61□□□□□ -1.03
TMEM42-202ENST00000477126 KRTAP12-3P60328 96 aa8.58□□□□□ -1.04
TMEM42-202ENST00000477126 SPRR2GQ9BYE4 73 aa8.52□□□□□ -1.04
TMEM42-202ENST00000477126 KRTAP8-1Q8IUC2 63 aa8.49□□□□□ -1.05
TMEM42-202ENST00000477126 KMT2DO14686 5537 aa8.42□□□□□ -1.06
TMEM42-202ENST00000477126 KRTAP10-12P60413 245 aa8.41□□□□□ -1.06
TMEM42-202ENST00000477126 LCE2CQ5TA81 110 aa8.4□□□□□ -1.07
TMEM42-202ENST00000477126 MT1FP04733 61 aa8.38□□□□□ -1.07
TMEM42-202ENST00000477126 KRTAP10-7P60409 375 aaPredicted RBP8.33□□□□□ -1.08
TMEM42-202ENST00000477126 KRTAP10-5P60370 271 aa8.28□□□□□ -1.08
TMEM42-202ENST00000477126 MT2AP02795 61 aa8.26□□□□□ -1.09
TMEM42-202ENST00000477126 MT1XP80297 61 aa8.26□□□□□ -1.09
TMEM42-202ENST00000477126 USH2AO75445 5202 aa8.2□□□□□ -1.1
TMEM42-202ENST00000477126 MT1HP80294 61 aa8.16□□□□□ -1.1
TMEM42-202ENST00000477126 MT1BP07438 61 aa8.12□□□□□ -1.11
TMEM42-202ENST00000477126 KRTAP19-5Q3LI72 72 aa8.07□□□□□ -1.12
TMEM42-202ENST00000477126 KRTAP9-8Q9BYQ0 159 aa8.02□□□□□ -1.13
TMEM42-202ENST00000477126 LCE3CQ5T5A8 94 aa8□□□□□ -1.13
TMEM42-202ENST00000477126 KRTAP9-6A8MVA2 160 aa8□□□□□ -1.13
TMEM42-202ENST00000477126 KRTAP4-7Q9BYR0 210 aa7.99□□□□□ -1.13
TMEM42-202ENST00000477126 KRTAP19-8Q3LI54 63 aa7.93□□□□□ -1.14
TMEM42-202ENST00000477126 KRTAP4-8A0A0G2JLE6 195 aa7.89□□□□□ -1.15
TMEM42-202ENST00000477126 KRTAP4-8Q9BYQ9 185 aa7.89□□□□□ -1.15
TMEM42-202ENST00000477126 KRTAP9-3Q9BYQ3 159 aa7.6□□□□□ -1.19
TMEM42-202ENST00000477126 KRTAP2-3P0C7H8 128 aa7.55□□□□□ -1.2
TMEM42-202ENST00000477126 KRTAP2-4Q9BYR9 128 aa7.55□□□□□ -1.2
TMEM42-202ENST00000477126 KRTAP2-1Q9BYU5 128 aa7.55□□□□□ -1.2
TMEM42-202ENST00000477126 CRCT1Q9UGL9 99 aa7.51□□□□□ -1.21
TMEM42-202ENST00000477126 DSTQ03001 7570 aaKnown RBP7.47□□□□□ -1.21
TMEM42-202ENST00000477126 FSIP2Q5CZC0 6907 aa7.45□□□□□ -1.22
TMEM42-202ENST00000477126 LCE2BO14633 110 aa7.41□□□□□ -1.22
TMEM42-202ENST00000477126 FCGBPQ9Y6R7 5405 aaPredicted RBP7.4□□□□□ -1.22
TMEM42-202ENST00000477126 LOC100996750A0A140TA64 210 aa7.39□□□□□ -1.23
TMEM42-202ENST00000477126 SYNE1Q8NF91 8797 aaKnown RBP7.35□□□□□ -1.23
TMEM42-202ENST00000477126 KRTAP19-7Q3SYF9 63 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms