RNA–Protein interactions for RNA: ENST00000477047.6

SPATA9-204, Transcript of spermatogenesis associated 9, humanhuman

TSL 1 (best)

Gene SPATA9, Length 1,592 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPATA9-204ENST00000477047 KRTAP10-11P60412 298 aa3.47□□□□□ -1.85
SPATA9-204ENST00000477047 PP632Q6XCG6 107 aa3.47□□□□□ -1.85
SPATA9-204ENST00000477047 A0A096LNI7 61 aa3.46□□□□□ -1.85
SPATA9-204ENST00000477047 HYDINQ4G0P3 5121 aa3.46□□□□□ -1.86
SPATA9-204ENST00000477047 SPRR5A0A1B0GTR4 108 aa3.44□□□□□ -1.86
SPATA9-204ENST00000477047 SMR3AQ99954 134 aa3.44□□□□□ -1.86
SPATA9-204ENST00000477047 RYR1P21817 5038 aa3.42□□□□□ -1.86
SPATA9-204ENST00000477047 SPINK6Q6UWN8 80 aa3.42□□□□□ -1.86
SPATA9-204ENST00000477047 APLNQ9ULZ1 77 aa3.42□□□□□ -1.86
SPATA9-204ENST00000477047 VWFP04275 2813 aa3.4□□□□□ -1.86
SPATA9-204ENST00000477047 MGAM2Q2M2H8 2515 aa3.4□□□□□ -1.87
SPATA9-204ENST00000477047 PRKDCP78527 4128 aaKnown RBP3.39□□□□□ -1.87
SPATA9-204ENST00000477047 KRTAP10-8P60410 259 aa3.38□□□□□ -1.87
SPATA9-204ENST00000477047 TRRAPQ9Y4A5 3859 aa3.38□□□□□ -1.87
SPATA9-204ENST00000477047 SONP18583 2426 aaKnown RBP3.38□□□□□ -1.87
SPATA9-204ENST00000477047 KRTAP12-1P59990 96 aa3.37□□□□□ -1.87
SPATA9-204ENST00000477047 KRTAP13-4Q3LI77 160 aa3.37□□□□□ -1.87
SPATA9-204ENST00000477047 HRNRQ86YZ3 2850 aaPredicted RBP3.36□□□□□ -1.87
SPATA9-204ENST00000477047 A0A0D9SG42 100 aa3.35□□□□□ -1.87
SPATA9-204ENST00000477047 HTN3P15516 51 aa3.35□□□□□ -1.87
SPATA9-204ENST00000477047 UBR4Q5T4S7 5183 aa3.35□□□□□ -1.87
SPATA9-204ENST00000477047 HERC2O95714 4834 aa3.34□□□□□ -1.87
SPATA9-204ENST00000477047 KRTAP5-2Q701N4 177 aa3.34□□□□□ -1.87
SPATA9-204ENST00000477047 RYR2Q92736 4967 aa3.34□□□□□ -1.87
SPATA9-204ENST00000477047 ANK3Q12955 4377 aaKnown RBP3.32□□□□□ -1.88
SPATA9-204ENST00000477047 SRRM2Q9UQ35 2752 aaKnown RBP3.32□□□□□ -1.88
SPATA9-204ENST00000477047 DEFB135Q30KP9 77 aa3.32□□□□□ -1.88
SPATA9-204ENST00000477047 LCE1AQ5T7P2 110 aa3.32□□□□□ -1.88
SPATA9-204ENST00000477047 ZANQ9Y493 2812 aa3.31□□□□□ -1.88
SPATA9-204ENST00000477047 M0QZ58 72 aa3.31□□□□□ -1.88
SPATA9-204ENST00000477047 TENM1Q9UKZ4 2725 aa3.31□□□□□ -1.88
SPATA9-204ENST00000477047 OBSCNQ5VST9 7968 aa3.29□□□□□ -1.88
SPATA9-204ENST00000477047 DEFB4AO15263 64 aa3.28□□□□□ -1.88
SPATA9-204ENST00000477047 Q5VSD8 79 aa3.27□□□□□ -1.89
SPATA9-204ENST00000477047 VPS13DQ5THJ4 4388 aa3.27□□□□□ -1.89
SPATA9-204ENST00000477047 MAPK1IP1LQ8NDC0 245 aa3.26□□□□□ -1.89
SPATA9-204ENST00000477047 KRTAP1-5Q9BYS1 174 aa3.22□□□□□ -1.89
SPATA9-204ENST00000477047 TENM3Q9P273 2699 aa3.22□□□□□ -1.89
SPATA9-204ENST00000477047 KRTAP4-3Q9BYR4 195 aa3.21□□□□□ -1.9
SPATA9-204ENST00000477047 DNAH1Q9P2D7 4330 aa3.19□□□□□ -1.9
SPATA9-204ENST00000477047 DMBT1Q9UGM3 2413 aaPredicted RBP3.19□□□□□ -1.9
SPATA9-204ENST00000477047 CMYA5Q8N3K9 4069 aa3.19□□□□□ -1.9
SPATA9-204ENST00000477047 A0A1B0GVY2 172 aa3.18□□□□□ -1.9
SPATA9-204ENST00000477047 RPS29P62273 56 aaKnown RBP3.18□□□□□ -1.9
SPATA9-204ENST00000477047 SACSQ9NZJ4 4579 aa3.16□□□□□ -1.9
SPATA9-204ENST00000477047 COL7A1Q02388 2944 aa3.15□□□□□ -1.9
SPATA9-204ENST00000477047 HERC1Q15751 4861 aa3.14□□□□□ -1.91
SPATA9-204ENST00000477047 ABCA13Q86UQ4 5058 aa3.14□□□□□ -1.91
SPATA9-204ENST00000477047 DYNC2H1Q8NCM8 4307 aaKnown RBP3.14□□□□□ -1.91
SPATA9-204ENST00000477047 KRTAP2-2Q9BYT5 123 aa3.13□□□□□ -1.91
SPATA9-204ENST00000477047 LYSTQ99698 3801 aa3.11□□□□□ -1.91
SPATA9-204ENST00000477047 FRAS1Q86XX4 4008 aa3.1□□□□□ -1.91
SPATA9-204ENST00000477047 CSMD3Q7Z407 3707 aa3.1□□□□□ -1.91
SPATA9-204ENST00000477047 DNAH11Q96DT5 4516 aa3.1□□□□□ -1.91
SPATA9-204ENST00000477047 KIAA1109Q2LD37 5005 aa3.09□□□□□ -1.91
SPATA9-204ENST00000477047 MT3P25713 68 aa3.08□□□□□ -1.92
SPATA9-204ENST00000477047 KRTAP13-2Q52LG2 175 aa3.07□□□□□ -1.92
SPATA9-204ENST00000477047 KRTAP10-3P60369 221 aa3.06□□□□□ -1.92
SPATA9-204ENST00000477047 HECTD4Q9Y4D8 3996 aa3.05□□□□□ -1.92
SPATA9-204ENST00000477047 DNAH8Q96JB1 4490 aa3.03□□□□□ -1.93
SPATA9-204ENST00000477047 STAB2Q8WWQ8 2551 aa3□□□□□ -1.93
SPATA9-204ENST00000477047 DNAH3Q8TD57 4116 aa2.97□□□□□ -1.93
SPATA9-204ENST00000477047 DNAH9Q9NYC9 4486 aa2.96□□□□□ -1.94
SPATA9-204ENST00000477047 DNAH7Q8WXX0 4024 aa2.96□□□□□ -1.94
SPATA9-204ENST00000477047 MYCBP2O75592 4640 aa2.95□□□□□ -1.94
SPATA9-204ENST00000477047 STARD9Q9P2P6 4700 aa2.94□□□□□ -1.94
SPATA9-204ENST00000477047 TNP1P09430 55 aa2.94□□□□□ -1.94
SPATA9-204ENST00000477047 DNAH17Q9UFH2 4485 aa2.94□□□□□ -1.94
SPATA9-204ENST00000477047 DNAH10Q8IVF4 4471 aa2.92□□□□□ -1.94
SPATA9-204ENST00000477047 DNAH6Q9C0G6 4158 aa2.92□□□□□ -1.94
SPATA9-204ENST00000477047 KRTAP1-4P0C5Y4 121 aa2.91□□□□□ -1.94
SPATA9-204ENST00000477047 KRTAP10-10P60014 251 aa2.91□□□□□ -1.94
SPATA9-204ENST00000477047 DNAH2Q9P225 4427 aa2.9□□□□□ -1.94
SPATA9-204ENST00000477047 MUC2Q02817 5179 aa2.9□□□□□ -1.95
SPATA9-204ENST00000477047 KRTAP5-8O75690 187 aa2.89□□□□□ -1.95
SPATA9-204ENST00000477047 PLECQ15149 4684 aaKnown RBP2.88□□□□□ -1.95
SPATA9-204ENST00000477047 HUWE1Q7Z6Z7 4374 aaKnown RBP2.87□□□□□ -1.95
SPATA9-204ENST00000477047 KMT2AQ03164 3969 aa2.87□□□□□ -1.95
SPATA9-204ENST00000477047 KRTAP9-6A8MVA2 160 aa2.87□□□□□ -1.95
SPATA9-204ENST00000477047 C9orf92A6NGG3 77 aa2.86□□□□□ -1.95
SPATA9-204ENST00000477047 RNF213Q63HN8 5207 aa2.81□□□□□ -1.96
SPATA9-204ENST00000477047 HMCN2Q8NDA2 5059 aa2.81□□□□□ -1.96
SPATA9-204ENST00000477047 PKHD1P08F94 4074 aa2.81□□□□□ -1.96
SPATA9-204ENST00000477047 HSPG2P98160 4391 aa2.8□□□□□ -1.96
SPATA9-204ENST00000477047 LCE1FQ5T754 118 aa2.79□□□□□ -1.96
SPATA9-204ENST00000477047 FAT4Q6V0I7 4981 aa2.77□□□□□ -1.97
SPATA9-204ENST00000477047 DYNC1H1Q14204 4646 aaKnown RBP2.77□□□□□ -1.97
SPATA9-204ENST00000477047 APOBP04114 4563 aaKnown RBP2.75□□□□□ -1.97
SPATA9-204ENST00000477047 FAT2Q9NYQ8 4349 aa2.74□□□□□ -1.97
SPATA9-204ENST00000477047 KRTAP10-1P60331 282 aa2.72□□□□□ -1.97
SPATA9-204ENST00000477047 KRTAP10-5P60370 271 aa2.72□□□□□ -1.97
SPATA9-204ENST00000477047 PKD1P98161 4303 aa2.71□□□□□ -1.98
SPATA9-204ENST00000477047 FSIP2Q5CZC0 6907 aa2.68□□□□□ -1.98
SPATA9-204ENST00000477047 CRCT1Q9UGL9 99 aa2.67□□□□□ -1.98
SPATA9-204ENST00000477047 FLGP20930 4061 aaPredicted RBP2.65□□□□□ -1.98
SPATA9-204ENST00000477047 KRTAP10-12P60413 245 aa2.65□□□□□ -1.99
SPATA9-204ENST00000477047 LRP2P98164 4655 aa2.64□□□□□ -1.99
SPATA9-204ENST00000477047 KRTAP8-1Q8IUC2 63 aa2.64□□□□□ -1.99
SPATA9-204ENST00000477047 VPS13BQ7Z7G8 4022 aa2.63□□□□□ -1.99
SPATA9-204ENST00000477047 FAT1Q14517 4588 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 105.9 ms