RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 LCA10Q71F78 164 aa5.26□□□□□ -1.57
NUDCD3-206ENST00000475952 CYP4F30PQ9H0H9 118 aa5.25□□□□□ -1.57
NUDCD3-206ENST00000475952 ATOX1O00244 68 aa5.21□□□□□ -1.58
NUDCD3-206ENST00000475952 UQCRQO14949 82 aa5.21□□□□□ -1.58
NUDCD3-206ENST00000475952 MDN1Q9NU22 5596 aa5.21□□□□□ -1.58
NUDCD3-206ENST00000475952 H0Y9P7 68 aa5.2□□□□□ -1.58
NUDCD3-206ENST00000475952 J3QR89 54 aa5.19□□□□□ -1.58
NUDCD3-206ENST00000475952 LINC00643Q86TS7 51 aa5.19□□□□□ -1.58
NUDCD3-206ENST00000475952 A0A087WVE0 104 aa5.17□□□□□ -1.58
NUDCD3-206ENST00000475952 K7ERU9 68 aa5.16□□□□□ -1.58
NUDCD3-206ENST00000475952 KLKP1Q107X0 134 aa5.14□□□□□ -1.59
NUDCD3-206ENST00000475952 KMT2DO14686 5537 aa5.13□□□□□ -1.59
NUDCD3-206ENST00000475952 Q5VV11 94 aa5.13□□□□□ -1.59
NUDCD3-206ENST00000475952 SPRR2GQ9BYE4 73 aa5.13□□□□□ -1.59
NUDCD3-206ENST00000475952 A8MUN3 132 aa5.11□□□□□ -1.59
NUDCD3-206ENST00000475952 NDUFC1O43677 76 aa5.1□□□□□ -1.59
NUDCD3-206ENST00000475952 MP68P56378 58 aa5.1□□□□□ -1.59
NUDCD3-206ENST00000475952 LINC00208Q96KT6 92 aa5.1□□□□□ -1.59
NUDCD3-206ENST00000475952 KRTAP19-8Q3LI54 63 aa5.09□□□□□ -1.59
NUDCD3-206ENST00000475952 IMUPQ9GZP8 106 aa5.09□□□□□ -1.59
NUDCD3-206ENST00000475952 CRIPTQ9P021 101 aa5.09□□□□□ -1.59
NUDCD3-206ENST00000475952 MT1BP07438 61 aa5.08□□□□□ -1.6
NUDCD3-206ENST00000475952 OCR1Q9BZK8 76 aa5.08□□□□□ -1.6
NUDCD3-206ENST00000475952 A6NN06 94 aa5.07□□□□□ -1.6
NUDCD3-206ENST00000475952 H0YAA0 97 aa5.05□□□□□ -1.6
NUDCD3-206ENST00000475952 KRTAP5-9P26371 169 aa5.05□□□□□ -1.6
NUDCD3-206ENST00000475952 H3BPC8 53 aa5.02□□□□□ -1.61
NUDCD3-206ENST00000475952 KRTAP2-3P0C7H8 128 aa5.01□□□□□ -1.61
NUDCD3-206ENST00000475952 SCGB1A1P11684 91 aa5.01□□□□□ -1.61
NUDCD3-206ENST00000475952 KRTAP2-4Q9BYR9 128 aa5.01□□□□□ -1.61
NUDCD3-206ENST00000475952 KRTAP10-5P60370 271 aa4.98□□□□□ -1.61
NUDCD3-206ENST00000475952 ADM2Q7Z4H4 148 aa4.98□□□□□ -1.61
NUDCD3-206ENST00000475952 DMAC1Q96GE9 116 aa4.95□□□□□ -1.62
NUDCD3-206ENST00000475952 C20orf197Q8N268 126 aa4.92□□□□□ -1.62
NUDCD3-206ENST00000475952 MT-ATP8P03928 68 aa4.91□□□□□ -1.62
NUDCD3-206ENST00000475952 R4GN34 69 aa4.89□□□□□ -1.63
NUDCD3-206ENST00000475952 SMIM20Q8N5G0 67 aa4.88□□□□□ -1.63
NUDCD3-206ENST00000475952 TRAV7A0A075B6U4 112 aa4.86□□□□□ -1.63
NUDCD3-206ENST00000475952 PRO2289Q9P1D8 64 aa4.86□□□□□ -1.63
NUDCD3-206ENST00000475952 P0C880 135 aa4.85□□□□□ -1.63
NUDCD3-206ENST00000475952 PLAC4Q8WY50 150 aa4.85□□□□□ -1.63
NUDCD3-206ENST00000475952 M0QZ58 72 aa4.83□□□□□ -1.64
NUDCD3-206ENST00000475952 ACYP2P14621 99 aa4.83□□□□□ -1.64
NUDCD3-206ENST00000475952 SPRR2EP22531 72 aa4.82□□□□□ -1.64
NUDCD3-206ENST00000475952 SPRR2BP35325 72 aa4.82□□□□□ -1.64
NUDCD3-206ENST00000475952 SPRR2AP35326 72 aa4.82□□□□□ -1.64
NUDCD3-206ENST00000475952 KRTAP2-2Q9BYT5 123 aa4.82□□□□□ -1.64
NUDCD3-206ENST00000475952 KRTAP2-1Q9BYU5 128 aa4.82□□□□□ -1.64
NUDCD3-206ENST00000475952 GPR98Q8WXG9 6306 aa4.81□□□□□ -1.64
NUDCD3-206ENST00000475952 SPTSSBQ8NFR3 76 aa4.8□□□□□ -1.64
NUDCD3-206ENST00000475952 CHKB-CPT1BH3BT56 60 aa4.77□□□□□ -1.65
NUDCD3-206ENST00000475952 MT1XP80297 61 aa4.77□□□□□ -1.65
NUDCD3-206ENST00000475952 SPRR2FQ96RM1 72 aa4.77□□□□□ -1.65
NUDCD3-206ENST00000475952 LINC01554Q52M75 96 aa4.76□□□□□ -1.65
NUDCD3-206ENST00000475952 SNURFQ9Y675 71 aa4.75□□□□□ -1.65
NUDCD3-206ENST00000475952 PCP4P48539 62 aa4.72□□□□□ -1.65
NUDCD3-206ENST00000475952 ANAPC13Q9BS18 74 aa4.72□□□□□ -1.65
NUDCD3-206ENST00000475952 SPANXA2-OT1Q8N9U9 137 aa4.71□□□□□ -1.66
NUDCD3-206ENST00000475952 LCE1AQ5T7P2 110 aa4.7□□□□□ -1.66
NUDCD3-206ENST00000475952 KRTAP12-2P59991 146 aa4.69□□□□□ -1.66
NUDCD3-206ENST00000475952 SERP2Q8N6R1 65 aa4.69□□□□□ -1.66
NUDCD3-206ENST00000475952 COX7CP15954 63 aa4.66□□□□□ -1.66
NUDCD3-206ENST00000475952 SPRR2DP22532 72 aa4.66□□□□□ -1.66
NUDCD3-206ENST00000475952 KRTAP8-1Q8IUC2 63 aa4.66□□□□□ -1.66
NUDCD3-206ENST00000475952 KRTAP23-1A1A580 65 aa4.65□□□□□ -1.67
NUDCD3-206ENST00000475952 CCDC179H3BU77 68 aa4.57□□□□□ -1.68
NUDCD3-206ENST00000475952 LCE3BQ5TA77 95 aa4.57□□□□□ -1.68
NUDCD3-206ENST00000475952 COA5Q86WW8 74 aa4.56□□□□□ -1.68
NUDCD3-206ENST00000475952 KRTAP4-8A0A0G2JLE6 195 aa4.55□□□□□ -1.68
NUDCD3-206ENST00000475952 KRTAP10-7P60409 375 aaPredicted RBP4.55□□□□□ -1.68
NUDCD3-206ENST00000475952 KRTAP10-12P60413 245 aa4.55□□□□□ -1.68
NUDCD3-206ENST00000475952 KRTAP4-8Q9BYQ9 185 aa4.55□□□□□ -1.68
NUDCD3-206ENST00000475952 KRTAP13-4Q3LI77 160 aa4.53□□□□□ -1.68
NUDCD3-206ENST00000475952 DSTQ03001 7570 aaKnown RBP4.53□□□□□ -1.68
NUDCD3-206ENST00000475952 SEC61GP60059 68 aa4.52□□□□□ -1.69
NUDCD3-206ENST00000475952 A0A0A0MQY5 61 aa4.51□□□□□ -1.69
NUDCD3-206ENST00000475952 SERP1Q9Y6X1 66 aa4.5□□□□□ -1.69
NUDCD3-206ENST00000475952 CAMK2N1Q7Z7J9 78 aa4.49□□□□□ -1.69
NUDCD3-206ENST00000475952 H7BZZ5 65 aa4.48□□□□□ -1.69
NUDCD3-206ENST00000475952 TMEM258P61165 79 aa4.47□□□□□ -1.69
NUDCD3-206ENST00000475952 CYSTM1Q9H1C7 97 aa4.46□□□□□ -1.7
NUDCD3-206ENST00000475952 ATP5EP56381 51 aaPredicted RBP4.45□□□□□ -1.7
NUDCD3-206ENST00000475952 A0A0D9SG42 100 aa4.42□□□□□ -1.7
NUDCD3-206ENST00000475952 A0A1B0GU33 70 aa4.41□□□□□ -1.7
NUDCD3-206ENST00000475952 SPATA8Q6RVD6 105 aa4.4□□□□□ -1.71
NUDCD3-206ENST00000475952 KRTAP4-9Q9BYQ8 210 aa4.39□□□□□ -1.71
NUDCD3-206ENST00000475952 SPINT4Q6UDR6 99 aa4.36□□□□□ -1.71
NUDCD3-206ENST00000475952 A0A1B0GU69 56 aa4.35□□□□□ -1.71
NUDCD3-206ENST00000475952 KRTAP19-4Q3LI73 84 aa4.34□□□□□ -1.71
NUDCD3-206ENST00000475952 HMCN1Q96RW7 5635 aa4.33□□□□□ -1.72
NUDCD3-206ENST00000475952 SMIM26A0A096LP01 95 aa4.31□□□□□ -1.72
NUDCD3-206ENST00000475952 KRTAP12-1P59990 96 aa4.31□□□□□ -1.72
NUDCD3-206ENST00000475952 RPS28P62857 69 aaKnown RBP4.31□□□□□ -1.72
NUDCD3-206ENST00000475952 AHNAK2Q8IVF2 5795 aa4.31□□□□□ -1.72
NUDCD3-206ENST00000475952 KRTAP19-7Q3SYF9 63 aa4.27□□□□□ -1.73
NUDCD3-206ENST00000475952 PRR15LQ9BU68 103 aa4.25□□□□□ -1.73
NUDCD3-206ENST00000475952 MT1EP04732 61 aa4.24□□□□□ -1.73
NUDCD3-206ENST00000475952 A8MU10 97 aa4.23□□□□□ -1.73
NUDCD3-206ENST00000475952 LCE1DQ5T752 114 aa4.23□□□□□ -1.73
NUDCD3-206ENST00000475952 LCE5AQ5TCM9 118 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms