RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 DNAH11Q96DT5 4516 aa6.05□□□□□ -1.44
U2AF1-209ENST00000475639 KRTAP15-1Q3LI76 137 aa6.05□□□□□ -1.44
U2AF1-209ENST00000475639 DNAH6Q9C0G6 4158 aa6.04□□□□□ -1.44
U2AF1-209ENST00000475639 STARD9Q9P2P6 4700 aa6□□□□□ -1.45
U2AF1-209ENST00000475639 PRKDCP78527 4128 aaKnown RBP5.98□□□□□ -1.45
U2AF1-209ENST00000475639 KRTAP10-10P60014 251 aa5.98□□□□□ -1.45
U2AF1-209ENST00000475639 A0A1B0GVY2 172 aa5.97□□□□□ -1.45
U2AF1-209ENST00000475639 LRP1BQ9NZR2 4599 aa5.94□□□□□ -1.46
U2AF1-209ENST00000475639 XP32Q5T750 250 aa5.94□□□□□ -1.46
U2AF1-209ENST00000475639 DNAH5Q8TE73 4624 aa5.92□□□□□ -1.46
U2AF1-209ENST00000475639 KRTAP1-4P0C5Y4 121 aa5.92□□□□□ -1.46
U2AF1-209ENST00000475639 KRTAP13-4Q3LI77 160 aa5.91□□□□□ -1.46
U2AF1-209ENST00000475639 VPS13BQ7Z7G8 4022 aa5.88□□□□□ -1.47
U2AF1-209ENST00000475639 KRTAP10-6P60371 365 aaPredicted RBP5.87□□□□□ -1.47
U2AF1-209ENST00000475639 FAT2Q9NYQ8 4349 aa5.8□□□□□ -1.48
U2AF1-209ENST00000475639 KRTAP3-2Q9BYR7 98 aa5.78□□□□□ -1.48
U2AF1-209ENST00000475639 KRTAP3-3Q9BYR6 98 aa5.76□□□□□ -1.49
U2AF1-209ENST00000475639 KRTAP12-2P59991 146 aa5.75□□□□□ -1.49
U2AF1-209ENST00000475639 PKD1P98161 4303 aa5.73□□□□□ -1.49
U2AF1-209ENST00000475639 KRTAP21-3Q3LHN1 58 aa5.67□□□□□ -1.5
U2AF1-209ENST00000475639 PKHD1P08F94 4074 aa5.65□□□□□ -1.5
U2AF1-209ENST00000475639 KRTAP12-1P59990 96 aa5.65□□□□□ -1.5
U2AF1-209ENST00000475639 SACSQ9NZJ4 4579 aa5.61□□□□□ -1.51
U2AF1-209ENST00000475639 DNHD1Q96M86 4753 aa5.6□□□□□ -1.51
U2AF1-209ENST00000475639 PKHD1L1Q86WI1 4243 aa5.6□□□□□ -1.51
U2AF1-209ENST00000475639 HYDINQ4G0P3 5121 aa5.55□□□□□ -1.52
U2AF1-209ENST00000475639 HSPG2P98160 4391 aa5.51□□□□□ -1.53
U2AF1-209ENST00000475639 INE1O15225 51 aa5.5□□□□□ -1.53
U2AF1-209ENST00000475639 APOBP04114 4563 aaKnown RBP5.48□□□□□ -1.53
U2AF1-209ENST00000475639 LRP1Q07954 4544 aaKnown RBP5.47□□□□□ -1.53
U2AF1-209ENST00000475639 FAT1Q14517 4588 aa5.46□□□□□ -1.54
U2AF1-209ENST00000475639 DYNC1H1Q14204 4646 aaKnown RBP5.44□□□□□ -1.54
U2AF1-209ENST00000475639 MYCBP2O75592 4640 aa5.43□□□□□ -1.54
U2AF1-209ENST00000475639 FAT3Q8TDW7 4589 aa5.4□□□□□ -1.54
U2AF1-209ENST00000475639 TNXBP22105 4242 aa5.36□□□□□ -1.55
U2AF1-209ENST00000475639 RYR3Q15413 4870 aa5.32□□□□□ -1.56
U2AF1-209ENST00000475639 KRTAP10-4P60372 401 aaPredicted RBP5.32□□□□□ -1.56
U2AF1-209ENST00000475639 LPAP08519 4548 aa5.32□□□□□ -1.56
U2AF1-209ENST00000475639 CRCT1Q9UGL9 99 aa5.22□□□□□ -1.57
U2AF1-209ENST00000475639 KMT2CQ8NEZ4 4911 aaKnown RBP5.18□□□□□ -1.58
U2AF1-209ENST00000475639 KRTAP10-12P60413 245 aa5.15□□□□□ -1.58
U2AF1-209ENST00000475639 LORP23490 312 aaPredicted RBP5.13□□□□□ -1.59
U2AF1-209ENST00000475639 LRP2P98164 4655 aa5.12□□□□□ -1.59
U2AF1-209ENST00000475639 SPRR5A0A1B0GTR4 108 aa5.07□□□□□ -1.6
U2AF1-209ENST00000475639 KRTAP12-3P60328 96 aa5.06□□□□□ -1.6
U2AF1-209ENST00000475639 RYR2Q92736 4967 aa5.04□□□□□ -1.6
U2AF1-209ENST00000475639 KRTAP23-1A1A580 65 aa4.97□□□□□ -1.61
U2AF1-209ENST00000475639 KRTAP10-5P60370 271 aa4.96□□□□□ -1.62
U2AF1-209ENST00000475639 RYR1P21817 5038 aa4.86□□□□□ -1.63
U2AF1-209ENST00000475639 MUC17Q685J3 4493 aa4.85□□□□□ -1.63
U2AF1-209ENST00000475639 LCE3AQ5TA76 89 aa4.84□□□□□ -1.64
U2AF1-209ENST00000475639 MT1HL1P0DM35 61 aa4.83□□□□□ -1.64
U2AF1-209ENST00000475639 PCLOQ9Y6V0 5065 aa4.83□□□□□ -1.64
U2AF1-209ENST00000475639 EPPK1P58107 5090 aaKnown RBP4.79□□□□□ -1.64
U2AF1-209ENST00000475639 KRTAP17-1Q9BYP8 105 aa4.78□□□□□ -1.64
U2AF1-209ENST00000475639 ABCA13Q86UQ4 5058 aa4.76□□□□□ -1.65
U2AF1-209ENST00000475639 KRTAP8-1Q8IUC2 63 aa4.73□□□□□ -1.65
U2AF1-209ENST00000475639 KRTAP4-1Q9BYQ7 146 aa4.7□□□□□ -1.66
U2AF1-209ENST00000475639 KRTAP19-2Q3LHN2 52 aa4.67□□□□□ -1.66
U2AF1-209ENST00000475639 KIAA1109Q2LD37 5005 aa4.65□□□□□ -1.66
U2AF1-209ENST00000475639 FLGP20930 4061 aaPredicted RBP4.6□□□□□ -1.67
U2AF1-209ENST00000475639 MUC2Q02817 5179 aa4.59□□□□□ -1.68
U2AF1-209ENST00000475639 KRTAP10-7P60409 375 aaPredicted RBP4.51□□□□□ -1.69
U2AF1-209ENST00000475639 HERC1Q15751 4861 aa4.51□□□□□ -1.69
U2AF1-209ENST00000475639 SYNE1Q8NF91 8797 aaKnown RBP4.43□□□□□ -1.7
U2AF1-209ENST00000475639 KRTAP4-5Q9BYR2 181 aa4.42□□□□□ -1.7
U2AF1-209ENST00000475639 SPRR2GQ9BYE4 73 aa4.4□□□□□ -1.71
U2AF1-209ENST00000475639 KRTAP19-1Q8IUB9 90 aa4.39□□□□□ -1.71
U2AF1-209ENST00000475639 KRTAP19-4Q3LI73 84 aa4.38□□□□□ -1.71
U2AF1-209ENST00000475639 SPRR2FQ96RM1 72 aa4.33□□□□□ -1.72
U2AF1-209ENST00000475639 FAT4Q6V0I7 4981 aa4.32□□□□□ -1.72
U2AF1-209ENST00000475639 LCE3CQ5T5A8 94 aa4.28□□□□□ -1.72
U2AF1-209ENST00000475639 KRTAP19-5Q3LI72 72 aa4.25□□□□□ -1.73
U2AF1-209ENST00000475639 BIRC6Q9NR09 4857 aa4.23□□□□□ -1.73
U2AF1-209ENST00000475639 MT2AP02795 61 aa4.22□□□□□ -1.73
U2AF1-209ENST00000475639 HERC2O95714 4834 aa4.21□□□□□ -1.73
U2AF1-209ENST00000475639 HMCN2Q8NDA2 5059 aa4.21□□□□□ -1.74
U2AF1-209ENST00000475639 UBR4Q5T4S7 5183 aa4.21□□□□□ -1.74
U2AF1-209ENST00000475639 MT1XP80297 61 aa4.17□□□□□ -1.74
U2AF1-209ENST00000475639 LCE2CQ5TA81 110 aa4.17□□□□□ -1.74
U2AF1-209ENST00000475639 MT1HP80294 61 aa4.16□□□□□ -1.74
U2AF1-209ENST00000475639 KRTAP12-4P60329 112 aa4.16□□□□□ -1.74
U2AF1-209ENST00000475639 MT1FP04733 61 aa4.12□□□□□ -1.75
U2AF1-209ENST00000475639 KRTAP19-8Q3LI54 63 aa4.1□□□□□ -1.75
U2AF1-209ENST00000475639 KRTAP9-6A8MVA2 160 aa4.08□□□□□ -1.76
U2AF1-209ENST00000475639 LCE3BQ5TA77 95 aa4.08□□□□□ -1.76
U2AF1-209ENST00000475639 MT1BP07438 61 aa4.08□□□□□ -1.76
U2AF1-209ENST00000475639 KRTAP2-3P0C7H8 128 aa4.05□□□□□ -1.76
U2AF1-209ENST00000475639 KRTAP2-4Q9BYR9 128 aa4.05□□□□□ -1.76
U2AF1-209ENST00000475639 KRTAP2-1Q9BYU5 128 aa4.05□□□□□ -1.76
U2AF1-209ENST00000475639 RNF213Q63HN8 5207 aa4.03□□□□□ -1.76
U2AF1-209ENST00000475639 KRTAP9-8Q9BYQ0 159 aa4□□□□□ -1.77
U2AF1-209ENST00000475639 LCE3DQ9BYE3 92 aa3.99□□□□□ -1.77
U2AF1-209ENST00000475639 SPRR2EP22531 72 aa3.98□□□□□ -1.77
U2AF1-209ENST00000475639 SPRR2BP35325 72 aa3.98□□□□□ -1.77
U2AF1-209ENST00000475639 SPRR2AP35326 72 aa3.98□□□□□ -1.77
U2AF1-209ENST00000475639 LCE3EQ5T5B0 92 aa3.95□□□□□ -1.78
U2AF1-209ENST00000475639 KMT2DO14686 5537 aa3.95□□□□□ -1.78
U2AF1-209ENST00000475639 MT1GP13640 62 aa3.91□□□□□ -1.78
U2AF1-209ENST00000475639 LCE2BO14633 110 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 91.9 ms