RNA–Protein interactions for RNA: ENST00000475627.1

HLA-DMA-207, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 984 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-207ENST00000475627 IGKV2D-30A0A075B6S6 120 aa4.45□□□□□ -1.7
HLA-DMA-207ENST00000475627 MMP24-AS1A0A0U1RRL7 71 aa4.45□□□□□ -1.7
HLA-DMA-207ENST00000475627 ATP11AUNQ6ZP68 121 aa4.45□□□□□ -1.7
HLA-DMA-207ENST00000475627 MRPL34Q9BQ48 92 aaKnown RBP4.45□□□□□ -1.7
HLA-DMA-207ENST00000475627 RPL37P61927 97 aaKnown RBP4.44□□□□□ -1.7
HLA-DMA-207ENST00000475627 Q8N9L7 120 aa4.44□□□□□ -1.7
HLA-DMA-207ENST00000475627 C20orf166-AS1Q96NR2 134 aa4.44□□□□□ -1.7
HLA-DMA-207ENST00000475627 HMCN2Q8NDA2 5059 aa4.43□□□□□ -1.7
HLA-DMA-207ENST00000475627 A8MUU9 505 aa4.43□□□□□ -1.7
HLA-DMA-207ENST00000475627 KRTAP16-1A8MUX0 517 aa4.43□□□□□ -1.7
HLA-DMA-207ENST00000475627 NDUFC1O43677 76 aa4.43□□□□□ -1.7
HLA-DMA-207ENST00000475627 WFDC13Q8IUB5 93 aa4.43□□□□□ -1.7
HLA-DMA-207ENST00000475627 ATP5EP56381 51 aaPredicted RBP4.42□□□□□ -1.7
HLA-DMA-207ENST00000475627 Q8N9P0 234 aaPredicted RBP4.42□□□□□ -1.7
HLA-DMA-207ENST00000475627 TP53AIP1Q9HCN2 124 aa4.42□□□□□ -1.7
HLA-DMA-207ENST00000475627 SNURFQ9Y675 71 aa4.42□□□□□ -1.7
HLA-DMA-207ENST00000475627 ZCCHC13Q8WW36 166 aaKnown RBP4.37□□□□□ -1.71
HLA-DMA-207ENST00000475627 PCOTHQ58A44 107 aa4.36□□□□□ -1.71
HLA-DMA-207ENST00000475627 A8MUN3 132 aa4.35□□□□□ -1.71
HLA-DMA-207ENST00000475627 LRP2P98164 4655 aa4.35□□□□□ -1.71
HLA-DMA-207ENST00000475627 LPAP08519 4548 aa4.33□□□□□ -1.72
HLA-DMA-207ENST00000475627 TRAV22A0A0B4J277 110 aa4.33□□□□□ -1.72
HLA-DMA-207ENST00000475627 LUZP6Q538Z0 58 aa4.31□□□□□ -1.72
HLA-DMA-207ENST00000475627 C7orf65Q6ZTY9 151 aa4.31□□□□□ -1.72
HLA-DMA-207ENST00000475627 LOC101927531A0A1B0GV80 90 aa4.29□□□□□ -1.72
HLA-DMA-207ENST00000475627 H3BPC8 53 aa4.29□□□□□ -1.72
HLA-DMA-207ENST00000475627 KTN1-AS1Q86SY8 53 aa4.29□□□□□ -1.72
HLA-DMA-207ENST00000475627 H0Y9P7 68 aa4.27□□□□□ -1.73
HLA-DMA-207ENST00000475627 CYP4F30PQ9H0H9 118 aa4.27□□□□□ -1.73
HLA-DMA-207ENST00000475627 SPINK7P58062 85 aa4.26□□□□□ -1.73
HLA-DMA-207ENST00000475627 Q5W150 140 aa4.26□□□□□ -1.73
HLA-DMA-207ENST00000475627 UBR4Q5T4S7 5183 aa4.26□□□□□ -1.73
HLA-DMA-207ENST00000475627 LCA10Q71F78 164 aa4.25□□□□□ -1.73
HLA-DMA-207ENST00000475627 Q1T7F1 81 aa4.24□□□□□ -1.73
HLA-DMA-207ENST00000475627 MUC17Q685J3 4493 aa4.23□□□□□ -1.73
HLA-DMA-207ENST00000475627 C1orf64Q8NEQ6 169 aa4.23□□□□□ -1.73
HLA-DMA-207ENST00000475627 COX6B2Q6YFQ2 88 aa4.22□□□□□ -1.73
HLA-DMA-207ENST00000475627 BRK1Q8WUW1 75 aa4.21□□□□□ -1.74
HLA-DMA-207ENST00000475627 LINC00208Q96KT6 92 aa4.21□□□□□ -1.74
HLA-DMA-207ENST00000475627 K7ERS5 55 aa4.18□□□□□ -1.74
HLA-DMA-207ENST00000475627 SPANXA2-OT1Q8N9U9 137 aa4.18□□□□□ -1.74
HLA-DMA-207ENST00000475627 HRES1P13985 223 aa4.17□□□□□ -1.74
HLA-DMA-207ENST00000475627 KRTAP4-1Q9BYQ7 146 aa4.16□□□□□ -1.74
HLA-DMA-207ENST00000475627 ADM2Q7Z4H4 148 aa4.15□□□□□ -1.75
HLA-DMA-207ENST00000475627 RNF213Q63HN8 5207 aa4.15□□□□□ -1.75
HLA-DMA-207ENST00000475627 MUC2Q02817 5179 aa4.13□□□□□ -1.75
HLA-DMA-207ENST00000475627 LINC01554Q52M75 96 aa4.13□□□□□ -1.75
HLA-DMA-207ENST00000475627 Q5VV11 94 aa4.12□□□□□ -1.75
HLA-DMA-207ENST00000475627 H1FX-AS1Q4G0G2 97 aa4.11□□□□□ -1.75
HLA-DMA-207ENST00000475627 A6NED7 52 aa4.08□□□□□ -1.76
HLA-DMA-207ENST00000475627 M0R2T5 61 aa4.07□□□□□ -1.76
HLA-DMA-207ENST00000475627 COA5Q86WW8 74 aa4.06□□□□□ -1.76
HLA-DMA-207ENST00000475627 A8MU10 97 aa4.05□□□□□ -1.76
HLA-DMA-207ENST00000475627 ACYP2P14621 99 aa4.05□□□□□ -1.76
HLA-DMA-207ENST00000475627 DMAC1Q96GE9 116 aa4.05□□□□□ -1.76
HLA-DMA-207ENST00000475627 PRR15LQ9BU68 103 aa4.05□□□□□ -1.76
HLA-DMA-207ENST00000475627 S4R3F8 94 aa4.05□□□□□ -1.76
HLA-DMA-207ENST00000475627 KRTAP19-2Q3LHN2 52 aa4.04□□□□□ -1.76
HLA-DMA-207ENST00000475627 LINC01558Q9Y6Z2 57 aa4.04□□□□□ -1.76
HLA-DMA-207ENST00000475627 CHKB-CPT1BH3BT56 60 aa4.03□□□□□ -1.76
HLA-DMA-207ENST00000475627 SPTSSBQ8NFR3 76 aa4.03□□□□□ -1.76
HLA-DMA-207ENST00000475627 FAT4Q6V0I7 4981 aa4.02□□□□□ -1.77
HLA-DMA-207ENST00000475627 MT1HP80294 61 aa4.01□□□□□ -1.77
HLA-DMA-207ENST00000475627 CSAG1Q6PB30 78 aa4□□□□□ -1.77
HLA-DMA-207ENST00000475627 A6NN06 94 aa3.99□□□□□ -1.77
HLA-DMA-207ENST00000475627 CDC42SE1Q9NRR8 79 aa3.99□□□□□ -1.77
HLA-DMA-207ENST00000475627 FLGP20930 4061 aaPredicted RBP3.95□□□□□ -1.78
HLA-DMA-207ENST00000475627 LCE1AQ5T7P2 110 aa3.94□□□□□ -1.78
HLA-DMA-207ENST00000475627 KRTAP10-6P60371 365 aaPredicted RBP3.91□□□□□ -1.78
HLA-DMA-207ENST00000475627 MT3P25713 68 aa3.9□□□□□ -1.79
HLA-DMA-207ENST00000475627 H0YAA0 97 aa3.88□□□□□ -1.79
HLA-DMA-207ENST00000475627 A0A1B0GU33 70 aa3.86□□□□□ -1.79
HLA-DMA-207ENST00000475627 SPATA8Q6RVD6 105 aa3.84□□□□□ -1.79
HLA-DMA-207ENST00000475627 KRTAP10-10P60014 251 aa3.83□□□□□ -1.8
HLA-DMA-207ENST00000475627 CRIPTQ9P021 101 aa3.83□□□□□ -1.8
HLA-DMA-207ENST00000475627 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.82□□□□□ -1.8
HLA-DMA-207ENST00000475627 MT2AP02795 61 aa3.8□□□□□ -1.8
HLA-DMA-207ENST00000475627 KRTAP25-1Q3LHN0 102 aa3.8□□□□□ -1.8
HLA-DMA-207ENST00000475627 A0A1B0GU69 56 aa3.79□□□□□ -1.8
HLA-DMA-207ENST00000475627 SPINT4Q6UDR6 99 aa3.79□□□□□ -1.8
HLA-DMA-207ENST00000475627 ROMO1P60602 79 aa3.77□□□□□ -1.81
HLA-DMA-207ENST00000475627 MT1FP04733 61 aa3.76□□□□□ -1.81
HLA-DMA-207ENST00000475627 MIR22HGQ0VDD5 57 aa3.76□□□□□ -1.81
HLA-DMA-207ENST00000475627 UQCR11O14957 56 aa3.75□□□□□ -1.81
HLA-DMA-207ENST00000475627 R4GN34 69 aa3.75□□□□□ -1.81
HLA-DMA-207ENST00000475627 M0QZ58 72 aa3.72□□□□□ -1.81
HLA-DMA-207ENST00000475627 P0C880 135 aa3.7□□□□□ -1.82
HLA-DMA-207ENST00000475627 SPRR2GQ9BYE4 73 aa3.69□□□□□ -1.82
HLA-DMA-207ENST00000475627 LCE1FQ5T754 118 aa3.67□□□□□ -1.82
HLA-DMA-207ENST00000475627 PLAC4Q8WY50 150 aa3.61□□□□□ -1.83
HLA-DMA-207ENST00000475627 KRTAP19-8Q3LI54 63 aa3.6□□□□□ -1.83
HLA-DMA-207ENST00000475627 KRTAP5-11Q6L8G4 156 aa3.6□□□□□ -1.83
HLA-DMA-207ENST00000475627 PRO2289Q9P1D8 64 aa3.56□□□□□ -1.84
HLA-DMA-207ENST00000475627 KRTAP10-7P60409 375 aaPredicted RBP3.55□□□□□ -1.84
HLA-DMA-207ENST00000475627 A0A0D9SG42 100 aa3.53□□□□□ -1.84
HLA-DMA-207ENST00000475627 KRTAP13-4Q3LI77 160 aa3.53□□□□□ -1.84
HLA-DMA-207ENST00000475627 CRCT1Q9UGL9 99 aa3.52□□□□□ -1.85
HLA-DMA-207ENST00000475627 MT1BP07438 61 aa3.51□□□□□ -1.85
HLA-DMA-207ENST00000475627 KRTAP2-2Q9BYT5 123 aa3.51□□□□□ -1.85
HLA-DMA-207ENST00000475627 FSIP2Q5CZC0 6907 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms