RNA–Protein interactions for RNA: ENST00000475298.5

CCNL1-216, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 2,362 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-216ENST00000475298 LCE2DQ5TA82 110 aaPredicted RBP7□□□□□ -1.29
CCNL1-216ENST00000475298 LRP1Q07954 4544 aaKnown RBP6.93□□□□□ -1.3
CCNL1-216ENST00000475298 KRTAP3-1Q9BYR8 98 aa6.92□□□□□ -1.3
CCNL1-216ENST00000475298 C20orf166-AS1Q96NR2 134 aa6.91□□□□□ -1.3
CCNL1-216ENST00000475298 K7ERS5 55 aa6.91□□□□□ -1.3
CCNL1-216ENST00000475298 TPRXLQ17RH7 258 aa6.91□□□□□ -1.3
CCNL1-216ENST00000475298 SPINT4Q6UDR6 99 aa6.9□□□□□ -1.3
CCNL1-216ENST00000475298 NDUFAF8A1L188 74 aa6.89□□□□□ -1.31
CCNL1-216ENST00000475298 KRTAP15-1Q3LI76 137 aa6.88□□□□□ -1.31
CCNL1-216ENST00000475298 COX6B2Q6YFQ2 88 aa6.88□□□□□ -1.31
CCNL1-216ENST00000475298 TNXBP22105 4242 aa6.84□□□□□ -1.31
CCNL1-216ENST00000475298 HSPG2P98160 4391 aa6.84□□□□□ -1.31
CCNL1-216ENST00000475298 FAT3Q8TDW7 4589 aa6.84□□□□□ -1.32
CCNL1-216ENST00000475298 EPPK1P58107 5090 aaKnown RBP6.83□□□□□ -1.32
CCNL1-216ENST00000475298 HERC2O95714 4834 aa6.82□□□□□ -1.32
CCNL1-216ENST00000475298 C10orf95Q9H7T3 257 aa6.8□□□□□ -1.32
CCNL1-216ENST00000475298 Q5VSD8 79 aa6.79□□□□□ -1.32
CCNL1-216ENST00000475298 DMBT1Q9UGM3 2413 aaPredicted RBP6.77□□□□□ -1.33
CCNL1-216ENST00000475298 RPL37P61927 97 aaKnown RBP6.76□□□□□ -1.33
CCNL1-216ENST00000475298 MYCBP2O75592 4640 aa6.76□□□□□ -1.33
CCNL1-216ENST00000475298 KRTAP10-8P60410 259 aa6.75□□□□□ -1.33
CCNL1-216ENST00000475298 KRTAP13-4Q3LI77 160 aa6.74□□□□□ -1.33
CCNL1-216ENST00000475298 RYR1P21817 5038 aa6.72□□□□□ -1.33
CCNL1-216ENST00000475298 A0A0A0MQY5 61 aa6.72□□□□□ -1.33
CCNL1-216ENST00000475298 KIAA1109Q2LD37 5005 aa6.7□□□□□ -1.34
CCNL1-216ENST00000475298 KRTAP10-6P60371 365 aaPredicted RBP6.7□□□□□ -1.34
CCNL1-216ENST00000475298 A0A0D9SG42 100 aa6.67□□□□□ -1.34
CCNL1-216ENST00000475298 XP32Q5T750 250 aa6.64□□□□□ -1.35
CCNL1-216ENST00000475298 KRTAP3-2Q9BYR7 98 aa6.61□□□□□ -1.35
CCNL1-216ENST00000475298 MT1HL1P0DM35 61 aa6.59□□□□□ -1.35
CCNL1-216ENST00000475298 KRTAP3-3Q9BYR6 98 aa6.58□□□□□ -1.36
CCNL1-216ENST00000475298 S4R3F8 94 aa6.56□□□□□ -1.36
CCNL1-216ENST00000475298 LPAP08519 4548 aa6.55□□□□□ -1.36
CCNL1-216ENST00000475298 PCLOQ9Y6V0 5065 aa6.54□□□□□ -1.36
CCNL1-216ENST00000475298 KRTAP12-2P59991 146 aa6.54□□□□□ -1.36
CCNL1-216ENST00000475298 LRP2P98164 4655 aa6.51□□□□□ -1.37
CCNL1-216ENST00000475298 ABCA13Q86UQ4 5058 aa6.46□□□□□ -1.38
CCNL1-216ENST00000475298 KRTAP12-1P59990 96 aa6.44□□□□□ -1.38
CCNL1-216ENST00000475298 LUZP6Q538Z0 58 aa6.42□□□□□ -1.38
CCNL1-216ENST00000475298 KRTAP4-5Q9BYR2 181 aa6.42□□□□□ -1.38
CCNL1-216ENST00000475298 PLAC4Q8WY50 150 aa6.26□□□□□ -1.41
CCNL1-216ENST00000475298 MUC17Q685J3 4493 aa6.19□□□□□ -1.42
CCNL1-216ENST00000475298 J3QL48 77 aa6.18□□□□□ -1.42
CCNL1-216ENST00000475298 M0QZ58 72 aa6.18□□□□□ -1.42
CCNL1-216ENST00000475298 KRTAP4-1Q9BYQ7 146 aa6.16□□□□□ -1.42
CCNL1-216ENST00000475298 SEC61BP60468 96 aaKnown RBP6.13□□□□□ -1.43
CCNL1-216ENST00000475298 MUC2Q02817 5179 aa6.06□□□□□ -1.44
CCNL1-216ENST00000475298 LORP23490 312 aaPredicted RBP6.02□□□□□ -1.45
CCNL1-216ENST00000475298 R4GN34 69 aa6□□□□□ -1.45
CCNL1-216ENST00000475298 KRTAP19-2Q3LHN2 52 aa6□□□□□ -1.45
CCNL1-216ENST00000475298 HERC1Q15751 4861 aa5.98□□□□□ -1.45
CCNL1-216ENST00000475298 PP632Q6XCG6 107 aa5.89□□□□□ -1.47
CCNL1-216ENST00000475298 HMCN2Q8NDA2 5059 aa5.85□□□□□ -1.47
CCNL1-216ENST00000475298 FLGP20930 4061 aaPredicted RBP5.84□□□□□ -1.47
CCNL1-216ENST00000475298 KRTAP9-6A0A140TA67 174 aa5.81□□□□□ -1.48
CCNL1-216ENST00000475298 UBR4Q5T4S7 5183 aa5.79□□□□□ -1.48
CCNL1-216ENST00000475298 SPRR5A0A1B0GTR4 108 aa5.79□□□□□ -1.48
CCNL1-216ENST00000475298 KRTAP9-2Q9BYQ4 174 aa5.78□□□□□ -1.48
CCNL1-216ENST00000475298 FAT4Q6V0I7 4981 aa5.77□□□□□ -1.49
CCNL1-216ENST00000475298 CAMK2N1Q7Z7J9 78 aa5.69□□□□□ -1.5
CCNL1-216ENST00000475298 LCE2CQ5TA81 110 aa5.67□□□□□ -1.5
CCNL1-216ENST00000475298 PRO2289Q9P1D8 64 aa5.66□□□□□ -1.5
CCNL1-216ENST00000475298 RNF213Q63HN8 5207 aa5.66□□□□□ -1.5
CCNL1-216ENST00000475298 LCE2BO14633 110 aa5.58□□□□□ -1.52
CCNL1-216ENST00000475298 KRTAP23-1A1A580 65 aa5.57□□□□□ -1.52
CCNL1-216ENST00000475298 M0R2T5 61 aa5.55□□□□□ -1.52
CCNL1-216ENST00000475298 LCE2AQ5TA79 106 aaPredicted RBP5.53□□□□□ -1.52
CCNL1-216ENST00000475298 TNP1P09430 55 aa5.53□□□□□ -1.52
CCNL1-216ENST00000475298 MT1HP80294 61 aa5.52□□□□□ -1.53
CCNL1-216ENST00000475298 KRTAP19-1Q8IUB9 90 aa5.49□□□□□ -1.53
CCNL1-216ENST00000475298 SPRR2GQ9BYE4 73 aa5.47□□□□□ -1.53
CCNL1-216ENST00000475298 INE1O15225 51 aa5.45□□□□□ -1.54
CCNL1-216ENST00000475298 MT1FP04733 61 aa5.43□□□□□ -1.54
CCNL1-216ENST00000475298 CRCT1Q9UGL9 99 aa5.43□□□□□ -1.54
CCNL1-216ENST00000475298 MT2AP02795 61 aa5.42□□□□□ -1.54
CCNL1-216ENST00000475298 KRTAP10-10P60014 251 aa5.41□□□□□ -1.54
CCNL1-216ENST00000475298 LOC100996750A0A140TA64 210 aa5.38□□□□□ -1.55
CCNL1-216ENST00000475298 KRTAP9-8Q9BYQ0 159 aa5.38□□□□□ -1.55
CCNL1-216ENST00000475298 KRTAP4-6Q9BYQ5 205 aa5.38□□□□□ -1.55
CCNL1-216ENST00000475298 LCE3AQ5TA76 89 aa5.24□□□□□ -1.57
CCNL1-216ENST00000475298 KRTAP19-8Q3LI54 63 aa5.23□□□□□ -1.57
CCNL1-216ENST00000475298 MT1BP07438 61 aa5.22□□□□□ -1.57
CCNL1-216ENST00000475298 KRTAP10-5P60370 271 aa5.17□□□□□ -1.58
CCNL1-216ENST00000475298 MT1XP80297 61 aa5.16□□□□□ -1.58
CCNL1-216ENST00000475298 KRTAP9-3Q9BYQ3 159 aa5.15□□□□□ -1.58
CCNL1-216ENST00000475298 KRTAP9-7A8MTY7 169 aa5.15□□□□□ -1.59
CCNL1-216ENST00000475298 KRTAP8-1Q8IUC2 63 aa5.09□□□□□ -1.59
CCNL1-216ENST00000475298 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.06□□□□□ -1.6
CCNL1-216ENST00000475298 KRTAP10-7P60409 375 aaPredicted RBP5.04□□□□□ -1.6
CCNL1-216ENST00000475298 KRTAP10-12P60413 245 aa5.02□□□□□ -1.61
CCNL1-216ENST00000475298 USH2AO75445 5202 aa5.02□□□□□ -1.61
CCNL1-216ENST00000475298 KRTAP12-3P60328 96 aa4.94□□□□□ -1.62
CCNL1-216ENST00000475298 KMT2DO14686 5537 aa4.89□□□□□ -1.63
CCNL1-216ENST00000475298 KRTAP4-8Q9BYQ9 185 aa4.84□□□□□ -1.63
CCNL1-216ENST00000475298 KRTAP19-5Q3LI72 72 aa4.8□□□□□ -1.64
CCNL1-216ENST00000475298 KRTAP4-8A0A0G2JLE6 195 aa4.78□□□□□ -1.64
CCNL1-216ENST00000475298 SSPOA2VEC9 5147 aa4.73□□□□□ -1.65
CCNL1-216ENST00000475298 KRTAP6-3Q3LI67 103 aa4.72□□□□□ -1.65
CCNL1-216ENST00000475298 LCE3CQ5T5A8 94 aa4.69□□□□□ -1.66
CCNL1-216ENST00000475298 KRTAP9-6A8MVA2 160 aa4.65□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms