RNA–Protein interactions for RNA: ENST00000475033.5

CHRNA4-204, Transcript of cholinergic receptor nicotinic alpha 4 subunit, humanhuman

TSL 2

Gene CHRNA4, Length 3,660 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA4-204ENST00000475033 RPL37P61927 97 aaKnown RBP6.92□□□□□ -1.3
CHRNA4-204ENST00000475033 VPS13BQ7Z7G8 4022 aa6.91□□□□□ -1.3
CHRNA4-204ENST00000475033 PKHD1P08F94 4074 aa6.89□□□□□ -1.31
CHRNA4-204ENST00000475033 J3QL48 77 aa6.89□□□□□ -1.31
CHRNA4-204ENST00000475033 TPRXLQ17RH7 258 aa6.87□□□□□ -1.31
CHRNA4-204ENST00000475033 DYNC1H1Q14204 4646 aaKnown RBP6.86□□□□□ -1.31
CHRNA4-204ENST00000475033 KIAA1109Q2LD37 5005 aa6.84□□□□□ -1.31
CHRNA4-204ENST00000475033 LRP1Q07954 4544 aaKnown RBP6.82□□□□□ -1.32
CHRNA4-204ENST00000475033 KRTAP10-4P60372 401 aaPredicted RBP6.81□□□□□ -1.32
CHRNA4-204ENST00000475033 KMT2CQ8NEZ4 4911 aaKnown RBP6.8□□□□□ -1.32
CHRNA4-204ENST00000475033 FAT2Q9NYQ8 4349 aa6.78□□□□□ -1.32
CHRNA4-204ENST00000475033 KRTAP13-4Q3LI77 160 aa6.78□□□□□ -1.32
CHRNA4-204ENST00000475033 SACSQ9NZJ4 4579 aa6.76□□□□□ -1.33
CHRNA4-204ENST00000475033 RYR1P21817 5038 aa6.75□□□□□ -1.33
CHRNA4-204ENST00000475033 PKD1P98161 4303 aa6.73□□□□□ -1.33
CHRNA4-204ENST00000475033 KRTAP10-8P60410 259 aa6.73□□□□□ -1.33
CHRNA4-204ENST00000475033 XP32Q5T750 250 aa6.72□□□□□ -1.33
CHRNA4-204ENST00000475033 S4R3F8 94 aa6.72□□□□□ -1.33
CHRNA4-204ENST00000475033 KRTAP10-6P60371 365 aaPredicted RBP6.69□□□□□ -1.34
CHRNA4-204ENST00000475033 KRTAP15-1Q3LI76 137 aa6.69□□□□□ -1.34
CHRNA4-204ENST00000475033 APOBP04114 4563 aaKnown RBP6.63□□□□□ -1.35
CHRNA4-204ENST00000475033 RYR3Q15413 4870 aa6.63□□□□□ -1.35
CHRNA4-204ENST00000475033 KRTAP12-2P59991 146 aa6.62□□□□□ -1.35
CHRNA4-204ENST00000475033 SEC61BP60468 96 aaKnown RBP6.61□□□□□ -1.35
CHRNA4-204ENST00000475033 KRTAP3-2Q9BYR7 98 aa6.58□□□□□ -1.36
CHRNA4-204ENST00000475033 KRTAP3-3Q9BYR6 98 aa6.57□□□□□ -1.36
CHRNA4-204ENST00000475033 KRTAP4-5Q9BYR2 181 aa6.57□□□□□ -1.36
CHRNA4-204ENST00000475033 RYR2Q92736 4967 aa6.55□□□□□ -1.36
CHRNA4-204ENST00000475033 MT1HL1P0DM35 61 aa6.52□□□□□ -1.37
CHRNA4-204ENST00000475033 EPPK1P58107 5090 aaKnown RBP6.51□□□□□ -1.37
CHRNA4-204ENST00000475033 LRP2P98164 4655 aa6.49□□□□□ -1.37
CHRNA4-204ENST00000475033 KRTAP12-1P59990 96 aa6.48□□□□□ -1.37
CHRNA4-204ENST00000475033 KRTAP17-1Q9BYP8 105 aa6.46□□□□□ -1.38
CHRNA4-204ENST00000475033 M0R2T5 61 aa6.46□□□□□ -1.38
CHRNA4-204ENST00000475033 PLAC4Q8WY50 150 aa6.41□□□□□ -1.38
CHRNA4-204ENST00000475033 M0QZ58 72 aa6.4□□□□□ -1.38
CHRNA4-204ENST00000475033 R4GN34 69 aa6.39□□□□□ -1.39
CHRNA4-204ENST00000475033 MUC2Q02817 5179 aa6.36□□□□□ -1.39
CHRNA4-204ENST00000475033 HSPG2P98160 4391 aa6.35□□□□□ -1.39
CHRNA4-204ENST00000475033 LPAP08519 4548 aa6.35□□□□□ -1.39
CHRNA4-204ENST00000475033 CAMK2N1Q7Z7J9 78 aa6.32□□□□□ -1.4
CHRNA4-204ENST00000475033 PKHD1L1Q86WI1 4243 aa6.32□□□□□ -1.4
CHRNA4-204ENST00000475033 RNF213Q63HN8 5207 aa6.23□□□□□ -1.41
CHRNA4-204ENST00000475033 ABCA13Q86UQ4 5058 aa6.22□□□□□ -1.41
CHRNA4-204ENST00000475033 TNXBP22105 4242 aa6.21□□□□□ -1.42
CHRNA4-204ENST00000475033 PCLOQ9Y6V0 5065 aa6.21□□□□□ -1.42
CHRNA4-204ENST00000475033 HERC2O95714 4834 aa6.2□□□□□ -1.42
CHRNA4-204ENST00000475033 HERC1Q15751 4861 aa6.1□□□□□ -1.43
CHRNA4-204ENST00000475033 FAT4Q6V0I7 4981 aa6.07□□□□□ -1.44
CHRNA4-204ENST00000475033 FSIP2Q5CZC0 6907 aa6.05□□□□□ -1.44
CHRNA4-204ENST00000475033 KRTAP4-1Q9BYQ7 146 aa6.05□□□□□ -1.44
CHRNA4-204ENST00000475033 LORP23490 312 aaPredicted RBP6.01□□□□□ -1.45
CHRNA4-204ENST00000475033 UBR4Q5T4S7 5183 aa5.96□□□□□ -1.46
CHRNA4-204ENST00000475033 PP632Q6XCG6 107 aa5.94□□□□□ -1.46
CHRNA4-204ENST00000475033 KRTAP10-10P60014 251 aa5.84□□□□□ -1.47
CHRNA4-204ENST00000475033 TNP1P09430 55 aa5.84□□□□□ -1.47
CHRNA4-204ENST00000475033 BIRC6Q9NR09 4857 aa5.72□□□□□ -1.49
CHRNA4-204ENST00000475033 HMCN2Q8NDA2 5059 aa5.72□□□□□ -1.49
CHRNA4-204ENST00000475033 PRO2289Q9P1D8 64 aa5.66□□□□□ -1.5
CHRNA4-204ENST00000475033 KRTAP19-2Q3LHN2 52 aa5.62□□□□□ -1.51
CHRNA4-204ENST00000475033 MUC17Q685J3 4493 aa5.61□□□□□ -1.51
CHRNA4-204ENST00000475033 OBSCNQ5VST9 7968 aa5.61□□□□□ -1.51
CHRNA4-204ENST00000475033 USH2AO75445 5202 aa5.58□□□□□ -1.52
CHRNA4-204ENST00000475033 SPRR5A0A1B0GTR4 108 aa5.54□□□□□ -1.52
CHRNA4-204ENST00000475033 MT1HP80294 61 aa5.49□□□□□ -1.53
CHRNA4-204ENST00000475033 FLGP20930 4061 aaPredicted RBP5.48□□□□□ -1.53
CHRNA4-204ENST00000475033 LCE2CQ5TA81 110 aa5.46□□□□□ -1.54
CHRNA4-204ENST00000475033 INE1O15225 51 aa5.43□□□□□ -1.54
CHRNA4-204ENST00000475033 KRTAP23-1A1A580 65 aa5.43□□□□□ -1.54
CHRNA4-204ENST00000475033 MT2AP02795 61 aa5.41□□□□□ -1.54
CHRNA4-204ENST00000475033 MT1FP04733 61 aa5.41□□□□□ -1.54
CHRNA4-204ENST00000475033 LCE3AQ5TA76 89 aa5.39□□□□□ -1.55
CHRNA4-204ENST00000475033 SPRR2GQ9BYE4 73 aa5.38□□□□□ -1.55
CHRNA4-204ENST00000475033 KRTAP19-1Q8IUB9 90 aa5.38□□□□□ -1.55
CHRNA4-204ENST00000475033 KMT2DO14686 5537 aa5.37□□□□□ -1.55
CHRNA4-204ENST00000475033 DSTQ03001 7570 aaKnown RBP5.27□□□□□ -1.57
CHRNA4-204ENST00000475033 KRTAP9-8Q9BYQ0 159 aa5.25□□□□□ -1.57
CHRNA4-204ENST00000475033 SYNE1Q8NF91 8797 aaKnown RBP5.21□□□□□ -1.57
CHRNA4-204ENST00000475033 KRTAP10-12P60413 245 aa5.18□□□□□ -1.58
CHRNA4-204ENST00000475033 CRCT1Q9UGL9 99 aa5.15□□□□□ -1.59
CHRNA4-204ENST00000475033 MT1BP07438 61 aa5.12□□□□□ -1.59
CHRNA4-204ENST00000475033 KRTAP19-8Q3LI54 63 aa5.11□□□□□ -1.59
CHRNA4-204ENST00000475033 KRTAP12-3P60328 96 aa5.09□□□□□ -1.59
CHRNA4-204ENST00000475033 KRTAP8-1Q8IUC2 63 aa5.08□□□□□ -1.6
CHRNA4-204ENST00000475033 FCGBPQ9Y6R7 5405 aaPredicted RBP5.07□□□□□ -1.6
CHRNA4-204ENST00000475033 MT1XP80297 61 aa5.07□□□□□ -1.6
CHRNA4-204ENST00000475033 KRTAP10-5P60370 271 aa5.06□□□□□ -1.6
CHRNA4-204ENST00000475033 KRTAP9-3Q9BYQ3 159 aa5.03□□□□□ -1.6
CHRNA4-204ENST00000475033 KRTAP10-7P60409 375 aaPredicted RBP5.03□□□□□ -1.6
CHRNA4-204ENST00000475033 KRTAP4-8A0A0G2JLE6 195 aa4.98□□□□□ -1.61
CHRNA4-204ENST00000475033 KRTAP4-8Q9BYQ9 185 aa4.98□□□□□ -1.61
CHRNA4-204ENST00000475033 LCE2BO14633 110 aa4.91□□□□□ -1.62
CHRNA4-204ENST00000475033 KRTAP19-5Q3LI72 72 aa4.86□□□□□ -1.63
CHRNA4-204ENST00000475033 MUC12Q9UKN1 5478 aa4.84□□□□□ -1.63
CHRNA4-204ENST00000475033 SYNE2Q8WXH0 6885 aaKnown RBP4.81□□□□□ -1.64
CHRNA4-204ENST00000475033 KRTAP4-7Q9BYR0 210 aa4.81□□□□□ -1.64
CHRNA4-204ENST00000475033 SSPOA2VEC9 5147 aa4.78□□□□□ -1.64
CHRNA4-204ENST00000475033 LCE3CQ5T5A8 94 aa4.75□□□□□ -1.65
CHRNA4-204ENST00000475033 LCE2AQ5TA79 106 aaPredicted RBP4.75□□□□□ -1.65
CHRNA4-204ENST00000475033 LCE2DQ5TA82 110 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms