RNA–Protein interactions for RNA: ENST00000474851.1

LSAMP-203, Transcript of limbic system associated membrane protein, humanhuman

TSL 5

Gene LSAMP, Length 772 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-203ENST00000474851 KRTAP13-3Q3SY46 172 aa4.03□□□□□ -1.76
LSAMP-203ENST00000474851 CDC42SE1Q9NRR8 79 aa4.02□□□□□ -1.77
LSAMP-203ENST00000474851 A0A1W2PNM2 257 aa4.01□□□□□ -1.77
LSAMP-203ENST00000474851 HCG22E2RYF7 251 aa4.01□□□□□ -1.77
LSAMP-203ENST00000474851 C7orf65Q6ZTY9 151 aa4.01□□□□□ -1.77
LSAMP-203ENST00000474851 DEFB105AQ8NG35 78 aa3.99□□□□□ -1.77
LSAMP-203ENST00000474851 LINC00208Q96KT6 92 aa3.99□□□□□ -1.77
LSAMP-203ENST00000474851 CHKB-CPT1BH3BT56 60 aa3.98□□□□□ -1.77
LSAMP-203ENST00000474851 LINC01558Q9Y6Z2 57 aa3.98□□□□□ -1.77
LSAMP-203ENST00000474851 C8orf87E5RJ46 101 aa3.97□□□□□ -1.77
LSAMP-203ENST00000474851 ASB16-AS1Q495Z4 193 aa3.97□□□□□ -1.77
LSAMP-203ENST00000474851 A0A0G2JQZ4 141 aa3.96□□□□□ -1.78
LSAMP-203ENST00000474851 K7EQZ3 153 aa3.96□□□□□ -1.78
LSAMP-203ENST00000474851 MP68P56378 58 aa3.96□□□□□ -1.78
LSAMP-203ENST00000474851 PRR15LQ9BU68 103 aa3.96□□□□□ -1.78
LSAMP-203ENST00000474851 KRTAP4-1Q9BYQ7 146 aa3.96□□□□□ -1.78
LSAMP-203ENST00000474851 IGLV8-61A0A075B6I0 122 aa3.93□□□□□ -1.78
LSAMP-203ENST00000474851 SEC61BP60468 96 aaKnown RBP3.92□□□□□ -1.78
LSAMP-203ENST00000474851 A6NED7 52 aa3.91□□□□□ -1.78
LSAMP-203ENST00000474851 COA5Q86WW8 74 aa3.91□□□□□ -1.78
LSAMP-203ENST00000474851 SPTSSBQ8NFR3 76 aa3.91□□□□□ -1.78
LSAMP-203ENST00000474851 H0Y9P7 68 aa3.9□□□□□ -1.79
LSAMP-203ENST00000474851 C9orf92A6NGG3 77 aa3.89□□□□□ -1.79
LSAMP-203ENST00000474851 IGFL1Q6UW32 110 aa3.89□□□□□ -1.79
LSAMP-203ENST00000474851 KRTAP19-2Q3LHN2 52 aa3.87□□□□□ -1.79
LSAMP-203ENST00000474851 PCOTHQ58A44 107 aa3.87□□□□□ -1.79
LSAMP-203ENST00000474851 SPINK7P58062 85 aa3.86□□□□□ -1.79
LSAMP-203ENST00000474851 LINC00313P59037 77 aa3.85□□□□□ -1.79
LSAMP-203ENST00000474851 LINC01554Q52M75 96 aa3.85□□□□□ -1.79
LSAMP-203ENST00000474851 CASC2Q6XLA1 102 aa3.85□□□□□ -1.79
LSAMP-203ENST00000474851 LINC00472Q9H8W2 130 aa3.85□□□□□ -1.79
LSAMP-203ENST00000474851 A8MWP4 228 aa3.84□□□□□ -1.79
LSAMP-203ENST00000474851 WFDC13Q8IUB5 93 aa3.84□□□□□ -1.79
LSAMP-203ENST00000474851 RPL37P61927 97 aaKnown RBP3.83□□□□□ -1.8
LSAMP-203ENST00000474851 TP53AIP1Q9HCN2 124 aa3.83□□□□□ -1.8
LSAMP-203ENST00000474851 MMP24-AS1A0A0U1RRL7 71 aa3.82□□□□□ -1.8
LSAMP-203ENST00000474851 HRES1P13985 223 aa3.82□□□□□ -1.8
LSAMP-203ENST00000474851 SPATA8Q6RVD6 105 aa3.81□□□□□ -1.8
LSAMP-203ENST00000474851 A0A087WSZ3 146 aa3.79□□□□□ -1.8
LSAMP-203ENST00000474851 DEFB116Q30KQ4 102 aa3.79□□□□□ -1.8
LSAMP-203ENST00000474851 Q96NJ1 140 aa3.79□□□□□ -1.8
LSAMP-203ENST00000474851 MT1HP80294 61 aa3.78□□□□□ -1.8
LSAMP-203ENST00000474851 PRAC1Q96KF2 57 aa3.77□□□□□ -1.81
LSAMP-203ENST00000474851 ADM2Q7Z4H4 148 aa3.75□□□□□ -1.81
LSAMP-203ENST00000474851 C20orf166-AS1Q96NR2 134 aa3.75□□□□□ -1.81
LSAMP-203ENST00000474851 A8MUU9 505 aa3.74□□□□□ -1.81
LSAMP-203ENST00000474851 FLGP20930 4061 aaPredicted RBP3.72□□□□□ -1.81
LSAMP-203ENST00000474851 NOTCH2NLQ7Z3S9 236 aa3.72□□□□□ -1.81
LSAMP-203ENST00000474851 C8orf17Q9NRJ1 99 aa3.72□□□□□ -1.81
LSAMP-203ENST00000474851 KRTAP16-1A8MUX0 517 aa3.71□□□□□ -1.82
LSAMP-203ENST00000474851 KRTAP10-6P60371 365 aaPredicted RBP3.71□□□□□ -1.82
LSAMP-203ENST00000474851 DMAC1Q96GE9 116 aa3.71□□□□□ -1.82
LSAMP-203ENST00000474851 ACYP2P14621 99 aa3.69□□□□□ -1.82
LSAMP-203ENST00000474851 A0A1B0GVX0 72 aa3.68□□□□□ -1.82
LSAMP-203ENST00000474851 COX6B2Q6YFQ2 88 aa3.68□□□□□ -1.82
LSAMP-203ENST00000474851 MRPL34Q9BQ48 92 aaKnown RBP3.68□□□□□ -1.82
LSAMP-203ENST00000474851 UQCR11O14957 56 aa3.66□□□□□ -1.82
LSAMP-203ENST00000474851 MIR22HGQ0VDD5 57 aa3.66□□□□□ -1.82
LSAMP-203ENST00000474851 CSAG1Q6PB30 78 aa3.66□□□□□ -1.82
LSAMP-203ENST00000474851 IGHV6-1A0A0B4J1U7 121 aa3.65□□□□□ -1.83
LSAMP-203ENST00000474851 M0R2T5 61 aa3.65□□□□□ -1.83
LSAMP-203ENST00000474851 KRTAP15-1Q3LI76 137 aa3.65□□□□□ -1.83
LSAMP-203ENST00000474851 A0A1B0GU69 56 aa3.64□□□□□ -1.83
LSAMP-203ENST00000474851 FSIP2Q5CZC0 6907 aa3.63□□□□□ -1.83
LSAMP-203ENST00000474851 Q5W150 140 aa3.62□□□□□ -1.83
LSAMP-203ENST00000474851 CRCT1Q9UGL9 99 aa3.62□□□□□ -1.83
LSAMP-203ENST00000474851 ROMO1P60602 79 aa3.61□□□□□ -1.83
LSAMP-203ENST00000474851 KRTAP25-1Q3LHN0 102 aa3.6□□□□□ -1.83
LSAMP-203ENST00000474851 IGKV2-30P06310 120 aa3.57□□□□□ -1.84
LSAMP-203ENST00000474851 MT2AP02795 61 aa3.53□□□□□ -1.84
LSAMP-203ENST00000474851 IGKV2D-30A0A075B6S6 120 aa3.51□□□□□ -1.85
LSAMP-203ENST00000474851 MT1FP04733 61 aa3.51□□□□□ -1.85
LSAMP-203ENST00000474851 USH2AO75445 5202 aa3.5□□□□□ -1.85
LSAMP-203ENST00000474851 P0C880 135 aa3.5□□□□□ -1.85
LSAMP-203ENST00000474851 SSPOA2VEC9 5147 aa3.49□□□□□ -1.85
LSAMP-203ENST00000474851 H0YAA0 97 aa3.48□□□□□ -1.85
LSAMP-203ENST00000474851 KRTAP10-10P60014 251 aa3.46□□□□□ -1.86
LSAMP-203ENST00000474851 H1FX-AS1Q4G0G2 97 aa3.43□□□□□ -1.86
LSAMP-203ENST00000474851 A0A1B0GU33 70 aa3.39□□□□□ -1.87
LSAMP-203ENST00000474851 FCGBPQ9Y6R7 5405 aaPredicted RBP3.38□□□□□ -1.87
LSAMP-203ENST00000474851 KRTAP19-6Q3LI70 58 aa3.34□□□□□ -1.87
LSAMP-203ENST00000474851 K7ERS5 55 aa3.33□□□□□ -1.88
LSAMP-203ENST00000474851 NDUFAF8A1L188 74 aa3.28□□□□□ -1.88
LSAMP-203ENST00000474851 S4R3F8 94 aa3.28□□□□□ -1.88
LSAMP-203ENST00000474851 SPINT4Q6UDR6 99 aa3.25□□□□□ -1.89
LSAMP-203ENST00000474851 CRIPTQ9P021 101 aa3.25□□□□□ -1.89
LSAMP-203ENST00000474851 MACF1Q9UPN3 7388 aaKnown RBP3.24□□□□□ -1.89
LSAMP-203ENST00000474851 MT1BP07438 61 aa3.24□□□□□ -1.89
LSAMP-203ENST00000474851 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.24□□□□□ -1.89
LSAMP-203ENST00000474851 SPRR2GQ9BYE4 73 aa3.24□□□□□ -1.89
LSAMP-203ENST00000474851 KRTAP19-8Q3LI54 63 aa3.23□□□□□ -1.89
LSAMP-203ENST00000474851 SYNE2Q8WXH0 6885 aaKnown RBP3.2□□□□□ -1.9
LSAMP-203ENST00000474851 KRTAP13-4Q3LI77 160 aa3.19□□□□□ -1.9
LSAMP-203ENST00000474851 KRTAP6-3Q3LI67 103 aa3.16□□□□□ -1.9
LSAMP-203ENST00000474851 C10orf95Q9H7T3 257 aa3.16□□□□□ -1.9
LSAMP-203ENST00000474851 KRTAP5-11Q6L8G4 156 aa3.15□□□□□ -1.91
LSAMP-203ENST00000474851 KRTAP10-5P60370 271 aa3.14□□□□□ -1.91
LSAMP-203ENST00000474851 LUZP6Q538Z0 58 aa3.11□□□□□ -1.91
LSAMP-203ENST00000474851 LCE1AQ5T7P2 110 aa3.11□□□□□ -1.91
LSAMP-203ENST00000474851 KRTAP12-1P59990 96 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms