RNA–Protein interactions for RNA: ENST00000474584.5

RPGR-206, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

TSL 2

Gene RPGR, Length 2,268 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-206ENST00000474584 KRTAP3-3Q9BYR6 98 aa7.23□□□□□ -1.25
RPGR-206ENST00000474584 FAT3Q8TDW7 4589 aa7.22□□□□□ -1.25
RPGR-206ENST00000474584 XP32Q5T750 250 aa7.22□□□□□ -1.25
RPGR-206ENST00000474584 DMBT1Q9UGM3 2413 aaPredicted RBP7.21□□□□□ -1.25
RPGR-206ENST00000474584 Q5VSD8 79 aa7.21□□□□□ -1.25
RPGR-206ENST00000474584 S4R3F8 94 aa7.21□□□□□ -1.25
RPGR-206ENST00000474584 TNXBP22105 4242 aa7.21□□□□□ -1.25
RPGR-206ENST00000474584 KRTAP10-6P60371 365 aaPredicted RBP7.21□□□□□ -1.26
RPGR-206ENST00000474584 LRP1Q07954 4544 aaKnown RBP7.17□□□□□ -1.26
RPGR-206ENST00000474584 ROMO1P60602 79 aa7.15□□□□□ -1.27
RPGR-206ENST00000474584 HSPG2P98160 4391 aa7.14□□□□□ -1.27
RPGR-206ENST00000474584 KRTAP3-2Q9BYR7 98 aa7.14□□□□□ -1.27
RPGR-206ENST00000474584 KRTAP13-4Q3LI77 160 aa7.13□□□□□ -1.27
RPGR-206ENST00000474584 EPPK1P58107 5090 aaKnown RBP7.13□□□□□ -1.27
RPGR-206ENST00000474584 A0A0D9SG42 100 aa7.12□□□□□ -1.27
RPGR-206ENST00000474584 CRIPTQ9P021 101 aa7.1□□□□□ -1.27
RPGR-206ENST00000474584 P0C880 135 aa7.06□□□□□ -1.28
RPGR-206ENST00000474584 MT1HL1P0DM35 61 aa7□□□□□ -1.29
RPGR-206ENST00000474584 MYCBP2O75592 4640 aa7□□□□□ -1.29
RPGR-206ENST00000474584 KIAA1109Q2LD37 5005 aa6.98□□□□□ -1.29
RPGR-206ENST00000474584 BIRC6Q9NR09 4857 aa6.97□□□□□ -1.29
RPGR-206ENST00000474584 RYR1P21817 5038 aa6.96□□□□□ -1.29
RPGR-206ENST00000474584 KRTAP17-1Q9BYP8 105 aa6.94□□□□□ -1.3
RPGR-206ENST00000474584 KRTAP12-2P59991 146 aa6.93□□□□□ -1.3
RPGR-206ENST00000474584 TPRXLQ17RH7 258 aa6.93□□□□□ -1.3
RPGR-206ENST00000474584 H3BS24 57 aa6.9□□□□□ -1.3
RPGR-206ENST00000474584 M0QZ58 72 aa6.89□□□□□ -1.31
RPGR-206ENST00000474584 SPINT4Q6UDR6 99 aa6.89□□□□□ -1.31
RPGR-206ENST00000474584 KRTAP12-1P59990 96 aa6.88□□□□□ -1.31
RPGR-206ENST00000474584 C10orf95Q9H7T3 257 aa6.85□□□□□ -1.31
RPGR-206ENST00000474584 HERC2O95714 4834 aa6.83□□□□□ -1.32
RPGR-206ENST00000474584 LPAP08519 4548 aa6.83□□□□□ -1.32
RPGR-206ENST00000474584 LRP2P98164 4655 aa6.81□□□□□ -1.32
RPGR-206ENST00000474584 ABCA13Q86UQ4 5058 aa6.73□□□□□ -1.33
RPGR-206ENST00000474584 R4GN34 69 aa6.71□□□□□ -1.34
RPGR-206ENST00000474584 SEC61BP60468 96 aaKnown RBP6.69□□□□□ -1.34
RPGR-206ENST00000474584 KRTAP4-5Q9BYR2 181 aa6.68□□□□□ -1.34
RPGR-206ENST00000474584 KRTAP15-1Q3LI76 137 aa6.63□□□□□ -1.35
RPGR-206ENST00000474584 PCLOQ9Y6V0 5065 aa6.61□□□□□ -1.35
RPGR-206ENST00000474584 MUC17Q685J3 4493 aa6.53□□□□□ -1.36
RPGR-206ENST00000474584 LORP23490 312 aaPredicted RBP6.52□□□□□ -1.37
RPGR-206ENST00000474584 KRTAP4-1Q9BYQ7 146 aa6.51□□□□□ -1.37
RPGR-206ENST00000474584 NDUFAF8A1L188 74 aa6.5□□□□□ -1.37
RPGR-206ENST00000474584 J3QL48 77 aa6.49□□□□□ -1.37
RPGR-206ENST00000474584 HERC1Q15751 4861 aa6.41□□□□□ -1.38
RPGR-206ENST00000474584 KRTAP19-2Q3LHN2 52 aa6.41□□□□□ -1.38
RPGR-206ENST00000474584 CAMK2N1Q7Z7J9 78 aa6.38□□□□□ -1.39
RPGR-206ENST00000474584 PLAC4Q8WY50 150 aa6.34□□□□□ -1.39
RPGR-206ENST00000474584 PP632Q6XCG6 107 aa6.33□□□□□ -1.4
RPGR-206ENST00000474584 HMCN2Q8NDA2 5059 aa6.25□□□□□ -1.41
RPGR-206ENST00000474584 LCE2DQ5TA82 110 aaPredicted RBP6.25□□□□□ -1.41
RPGR-206ENST00000474584 FLGP20930 4061 aaPredicted RBP6.23□□□□□ -1.41
RPGR-206ENST00000474584 MUC2Q02817 5179 aa6.17□□□□□ -1.42
RPGR-206ENST00000474584 TNP1P09430 55 aa6.15□□□□□ -1.43
RPGR-206ENST00000474584 LUZP6Q538Z0 58 aa6.11□□□□□ -1.43
RPGR-206ENST00000474584 KRTAP23-1A1A580 65 aa6.09□□□□□ -1.43
RPGR-206ENST00000474584 UBR4Q5T4S7 5183 aa6.03□□□□□ -1.44
RPGR-206ENST00000474584 LCE2CQ5TA81 110 aa5.99□□□□□ -1.45
RPGR-206ENST00000474584 SPRR2GQ9BYE4 73 aa5.99□□□□□ -1.45
RPGR-206ENST00000474584 M0R2T5 61 aa5.94□□□□□ -1.46
RPGR-206ENST00000474584 KRTAP19-1Q8IUB9 90 aa5.93□□□□□ -1.46
RPGR-206ENST00000474584 RNF213Q63HN8 5207 aa5.89□□□□□ -1.47
RPGR-206ENST00000474584 SPRR5A0A1B0GTR4 108 aa5.88□□□□□ -1.47
RPGR-206ENST00000474584 FAT4Q6V0I7 4981 aa5.85□□□□□ -1.47
RPGR-206ENST00000474584 MT1HP80294 61 aa5.85□□□□□ -1.47
RPGR-206ENST00000474584 A0A0A0MQY5 61 aa5.84□□□□□ -1.47
RPGR-206ENST00000474584 KRTAP10-10P60014 251 aa5.8□□□□□ -1.48
RPGR-206ENST00000474584 MT1FP04733 61 aa5.78□□□□□ -1.48
RPGR-206ENST00000474584 MT2AP02795 61 aa5.78□□□□□ -1.48
RPGR-206ENST00000474584 LCE3AQ5TA76 89 aa5.77□□□□□ -1.49
RPGR-206ENST00000474584 KRTAP9-8Q9BYQ0 159 aa5.72□□□□□ -1.49
RPGR-206ENST00000474584 KRTAP19-8Q3LI54 63 aa5.7□□□□□ -1.5
RPGR-206ENST00000474584 KRTAP8-1Q8IUC2 63 aa5.64□□□□□ -1.51
RPGR-206ENST00000474584 MT1BP07438 61 aa5.6□□□□□ -1.51
RPGR-206ENST00000474584 KRTAP10-5P60370 271 aa5.6□□□□□ -1.51
RPGR-206ENST00000474584 MT1XP80297 61 aa5.59□□□□□ -1.51
RPGR-206ENST00000474584 KRTAP10-12P60413 245 aa5.55□□□□□ -1.52
RPGR-206ENST00000474584 KRTAP12-3P60328 96 aa5.51□□□□□ -1.53
RPGR-206ENST00000474584 KRTAP9-3Q9BYQ3 159 aa5.47□□□□□ -1.53
RPGR-206ENST00000474584 PRO2289Q9P1D8 64 aa5.45□□□□□ -1.54
RPGR-206ENST00000474584 KRTAP10-7P60409 375 aaPredicted RBP5.44□□□□□ -1.54
RPGR-206ENST00000474584 LCE2AQ5TA79 106 aaPredicted RBP5.43□□□□□ -1.54
RPGR-206ENST00000474584 INE1O15225 51 aa5.27□□□□□ -1.57
RPGR-206ENST00000474584 LCE2BO14633 110 aa5.23□□□□□ -1.57
RPGR-206ENST00000474584 KRTAP19-5Q3LI72 72 aa5.23□□□□□ -1.57
RPGR-206ENST00000474584 LCE3CQ5T5A8 94 aa5.19□□□□□ -1.58
RPGR-206ENST00000474584 KRTAP4-8A0A0G2JLE6 195 aa5.06□□□□□ -1.6
RPGR-206ENST00000474584 KRTAP4-8Q9BYQ9 185 aa5.06□□□□□ -1.6
RPGR-206ENST00000474584 USH2AO75445 5202 aa5.05□□□□□ -1.6
RPGR-206ENST00000474584 KMT2DO14686 5537 aa5.03□□□□□ -1.6
RPGR-206ENST00000474584 KRTAP19-7Q3SYF9 63 aa4.98□□□□□ -1.61
RPGR-206ENST00000474584 KRTAP9-6A8MVA2 160 aa4.97□□□□□ -1.61
RPGR-206ENST00000474584 KRTAP9-2Q9BYQ4 174 aa4.96□□□□□ -1.62
RPGR-206ENST00000474584 FSIP2Q5CZC0 6907 aa4.95□□□□□ -1.62
RPGR-206ENST00000474584 KRTAP19-4Q3LI73 84 aa4.94□□□□□ -1.62
RPGR-206ENST00000474584 SSPOA2VEC9 5147 aa4.88□□□□□ -1.63
RPGR-206ENST00000474584 KRTAP4-7Q9BYR0 210 aa4.87□□□□□ -1.63
RPGR-206ENST00000474584 KRTAP2-3P0C7H8 128 aa4.85□□□□□ -1.63
RPGR-206ENST00000474584 MT1LQ93083 61 aa4.85□□□□□ -1.63
RPGR-206ENST00000474584 KRTAP2-4Q9BYR9 128 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms