RNA–Protein interactions for RNA: ENST00000474413.5

EFNA1-204, Transcript of ephrin A1, humanhuman

TSL 3

Gene EFNA1, Length 1,083 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-204ENST00000474413 FAM236BA0A1B0GV22 79 aa8.12□□□□□ -1.11
EFNA1-204ENST00000474413 SYNE2Q8WXH0 6885 aaKnown RBP8.11□□□□□ -1.11
EFNA1-204ENST00000474413 MT1BP07438 61 aa8.1□□□□□ -1.11
EFNA1-204ENST00000474413 LINC00208Q96KT6 92 aa8.1□□□□□ -1.11
EFNA1-204ENST00000474413 SPRR2GQ9BYE4 73 aa8.1□□□□□ -1.11
EFNA1-204ENST00000474413 J3QR89 54 aa8.07□□□□□ -1.12
EFNA1-204ENST00000474413 KRTAP19-8Q3LI54 63 aa8.06□□□□□ -1.12
EFNA1-204ENST00000474413 MP68P56378 58 aa8□□□□□ -1.13
EFNA1-204ENST00000474413 A8MUN3 132 aa7.99□□□□□ -1.13
EFNA1-204ENST00000474413 MT-ATP8P03928 68 aa7.96□□□□□ -1.14
EFNA1-204ENST00000474413 H0YAA0 97 aa7.95□□□□□ -1.14
EFNA1-204ENST00000474413 NDUFC1O43677 76 aa7.95□□□□□ -1.14
EFNA1-204ENST00000474413 Q5VV11 94 aa7.95□□□□□ -1.14
EFNA1-204ENST00000474413 H3BPC8 53 aa7.93□□□□□ -1.14
EFNA1-204ENST00000474413 IMUPQ9GZP8 106 aa7.91□□□□□ -1.14
EFNA1-204ENST00000474413 SCGB1A1P11684 91 aa7.89□□□□□ -1.15
EFNA1-204ENST00000474413 DMAC1Q96GE9 116 aa7.88□□□□□ -1.15
EFNA1-204ENST00000474413 CRIPTQ9P021 101 aa7.88□□□□□ -1.15
EFNA1-204ENST00000474413 K7ERU9 68 aa7.86□□□□□ -1.15
EFNA1-204ENST00000474413 ADM2Q7Z4H4 148 aa7.85□□□□□ -1.15
EFNA1-204ENST00000474413 KRTAP10-5P60370 271 aa7.84□□□□□ -1.15
EFNA1-204ENST00000474413 A6NN06 94 aa7.83□□□□□ -1.16
EFNA1-204ENST00000474413 TRAV7A0A075B6U4 112 aa7.77□□□□□ -1.17
EFNA1-204ENST00000474413 P0C880 135 aa7.75□□□□□ -1.17
EFNA1-204ENST00000474413 KRTAP6-3Q3LI67 103 aa7.75□□□□□ -1.17
EFNA1-204ENST00000474413 KRTAP3-2Q9BYR7 98 aa7.74□□□□□ -1.17
EFNA1-204ENST00000474413 SMIM20Q8N5G0 67 aa7.71□□□□□ -1.18
EFNA1-204ENST00000474413 NEBP20929 6669 aa7.65□□□□□ -1.19
EFNA1-204ENST00000474413 SNURFQ9Y675 71 aa7.64□□□□□ -1.19
EFNA1-204ENST00000474413 MUC12Q9UKN1 5478 aa7.62□□□□□ -1.19
EFNA1-204ENST00000474413 MT1XP80297 61 aa7.61□□□□□ -1.19
EFNA1-204ENST00000474413 ACYP2P14621 99 aa7.59□□□□□ -1.19
EFNA1-204ENST00000474413 R4GN34 69 aa7.58□□□□□ -1.2
EFNA1-204ENST00000474413 M0QZ58 72 aa7.57□□□□□ -1.2
EFNA1-204ENST00000474413 C20orf197Q8N268 126 aa7.57□□□□□ -1.2
EFNA1-204ENST00000474413 KMT2DO14686 5537 aa7.55□□□□□ -1.2
EFNA1-204ENST00000474413 SERP2Q8N6R1 65 aa7.54□□□□□ -1.2
EFNA1-204ENST00000474413 KRTAP5-9P26371 169 aa7.49□□□□□ -1.21
EFNA1-204ENST00000474413 SPANXA2-OT1Q8N9U9 137 aa7.49□□□□□ -1.21
EFNA1-204ENST00000474413 MDN1Q9NU22 5596 aa7.46□□□□□ -1.22
EFNA1-204ENST00000474413 PLAC4Q8WY50 150 aa7.46□□□□□ -1.22
EFNA1-204ENST00000474413 LINC01554Q52M75 96 aa7.44□□□□□ -1.22
EFNA1-204ENST00000474413 CHKB-CPT1BH3BT56 60 aa7.43□□□□□ -1.22
EFNA1-204ENST00000474413 SPTSSBQ8NFR3 76 aa7.43□□□□□ -1.22
EFNA1-204ENST00000474413 PRO2289Q9P1D8 64 aa7.43□□□□□ -1.22
EFNA1-204ENST00000474413 CYSTM1Q9H1C7 97 aa7.37□□□□□ -1.23
EFNA1-204ENST00000474413 KRTAP12-2P59991 146 aa7.35□□□□□ -1.23
EFNA1-204ENST00000474413 KRTAP13-4Q3LI77 160 aa7.34□□□□□ -1.23
EFNA1-204ENST00000474413 COX7CP15954 63 aa7.33□□□□□ -1.24
EFNA1-204ENST00000474413 COA5Q86WW8 74 aa7.31□□□□□ -1.24
EFNA1-204ENST00000474413 H7BZZ5 65 aa7.27□□□□□ -1.25
EFNA1-204ENST00000474413 KRTAP10-7P60409 375 aaPredicted RBP7.26□□□□□ -1.25
EFNA1-204ENST00000474413 KRTAP4-8A0A0G2JLE6 195 aa7.24□□□□□ -1.25
EFNA1-204ENST00000474413 KRTAP4-8Q9BYQ9 185 aa7.24□□□□□ -1.25
EFNA1-204ENST00000474413 SPRR2FQ96RM1 72 aa7.22□□□□□ -1.25
EFNA1-204ENST00000474413 KRTAP8-1Q8IUC2 63 aa7.21□□□□□ -1.26
EFNA1-204ENST00000474413 KRTAP10-12P60413 245 aa7.19□□□□□ -1.26
EFNA1-204ENST00000474413 KRTAP20-1Q3LI63 56 aa7.11□□□□□ -1.27
EFNA1-204ENST00000474413 SPRR2EP22531 72 aa7.1□□□□□ -1.27
EFNA1-204ENST00000474413 SPRR2BP35325 72 aa7.1□□□□□ -1.27
EFNA1-204ENST00000474413 SPRR2AP35326 72 aa7.1□□□□□ -1.27
EFNA1-204ENST00000474413 LCE1AQ5T7P2 110 aa7.08□□□□□ -1.28
EFNA1-204ENST00000474413 ANAPC13Q9BS18 74 aa7.08□□□□□ -1.28
EFNA1-204ENST00000474413 CCDC179H3BU77 68 aa7.03□□□□□ -1.28
EFNA1-204ENST00000474413 SPATA8Q6RVD6 105 aa7.03□□□□□ -1.28
EFNA1-204ENST00000474413 A0A0D9SG42 100 aa6.99□□□□□ -1.29
EFNA1-204ENST00000474413 SERP1Q9Y6X1 66 aa6.99□□□□□ -1.29
EFNA1-204ENST00000474413 SEC61GP60059 68 aa6.98□□□□□ -1.29
EFNA1-204ENST00000474413 A0A1B0GU33 70 aa6.97□□□□□ -1.29
EFNA1-204ENST00000474413 CAMK2N1Q7Z7J9 78 aa6.96□□□□□ -1.3
EFNA1-204ENST00000474413 KRTAP2-3P0C7H8 128 aa6.93□□□□□ -1.3
EFNA1-204ENST00000474413 KRTAP12-1P59990 96 aa6.93□□□□□ -1.3
EFNA1-204ENST00000474413 KRTAP2-4Q9BYR9 128 aa6.93□□□□□ -1.3
EFNA1-204ENST00000474413 A0A1B0GU69 56 aa6.85□□□□□ -1.31
EFNA1-204ENST00000474413 SPRR2DP22532 72 aa6.85□□□□□ -1.31
EFNA1-204ENST00000474413 SPINT4Q6UDR6 99 aa6.83□□□□□ -1.32
EFNA1-204ENST00000474413 A8MU10 97 aa6.82□□□□□ -1.32
EFNA1-204ENST00000474413 KRTAP19-7Q3SYF9 63 aa6.82□□□□□ -1.32
EFNA1-204ENST00000474413 ATP5EP56381 51 aaPredicted RBP6.81□□□□□ -1.32
EFNA1-204ENST00000474413 SMIM26A0A096LP01 95 aa6.72□□□□□ -1.33
EFNA1-204ENST00000474413 MT1EP04732 61 aa6.72□□□□□ -1.33
EFNA1-204ENST00000474413 KRTAP2-2Q9BYT5 123 aa6.71□□□□□ -1.34
EFNA1-204ENST00000474413 KRTAP2-1Q9BYU5 128 aa6.71□□□□□ -1.34
EFNA1-204ENST00000474413 TMEM258P61165 79 aa6.69□□□□□ -1.34
EFNA1-204ENST00000474413 LINC01558Q9Y6Z2 57 aa6.69□□□□□ -1.34
EFNA1-204ENST00000474413 LCE3BQ5TA77 95 aa6.66□□□□□ -1.34
EFNA1-204ENST00000474413 LCE5AQ5TCM9 118 aa6.64□□□□□ -1.35
EFNA1-204ENST00000474413 KRTAP19-5Q3LI72 72 aa6.62□□□□□ -1.35
EFNA1-204ENST00000474413 C10orf95Q9H7T3 257 aa6.62□□□□□ -1.35
EFNA1-204ENST00000474413 KRTAP19-3Q7Z4W3 81 aa6.61□□□□□ -1.35
EFNA1-204ENST00000474413 PRR15LQ9BU68 103 aa6.61□□□□□ -1.35
EFNA1-204ENST00000474413 DSTQ03001 7570 aaKnown RBP6.55□□□□□ -1.36
EFNA1-204ENST00000474413 LCE3AQ5TA76 89 aa6.52□□□□□ -1.37
EFNA1-204ENST00000474413 UQCR11O14957 56 aa6.44□□□□□ -1.38
EFNA1-204ENST00000474413 TNP1P09430 55 aa6.44□□□□□ -1.38
EFNA1-204ENST00000474413 MT1LQ93083 61 aa6.44□□□□□ -1.38
EFNA1-204ENST00000474413 MT1GP13640 62 aa6.41□□□□□ -1.38
EFNA1-204ENST00000474413 MT1MQ8N339 61 aa6.38□□□□□ -1.39
EFNA1-204ENST00000474413 MIR22HGQ0VDD5 57 aa6.33□□□□□ -1.4
EFNA1-204ENST00000474413 PSPHP1O15172 72 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 6.6 ms