RNA–Protein interactions for RNA: ENST00000474323.5

SAMM50-203, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

TSL 2

Gene SAMM50, Length 2,368 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-203ENST00000474323 KRTAP10-4P60372 401 aaPredicted RBP7.81□□□□□ -1.16
SAMM50-203ENST00000474323 COX6B2Q6YFQ2 88 aa7.78□□□□□ -1.16
SAMM50-203ENST00000474323 HSPG2P98160 4391 aa7.76□□□□□ -1.17
SAMM50-203ENST00000474323 C20orf166-AS1Q96NR2 134 aa7.76□□□□□ -1.17
SAMM50-203ENST00000474323 RPS29P62273 56 aaKnown RBP7.75□□□□□ -1.17
SAMM50-203ENST00000474323 EPPK1P58107 5090 aaKnown RBP7.73□□□□□ -1.17
SAMM50-203ENST00000474323 RYR1P21817 5038 aa7.72□□□□□ -1.17
SAMM50-203ENST00000474323 KIAA1109Q2LD37 5005 aa7.71□□□□□ -1.17
SAMM50-203ENST00000474323 NDUFAF8A1L188 74 aa7.7□□□□□ -1.18
SAMM50-203ENST00000474323 RPL37P61927 97 aaKnown RBP7.69□□□□□ -1.18
SAMM50-203ENST00000474323 Q5VSD8 79 aa7.68□□□□□ -1.18
SAMM50-203ENST00000474323 SPINT4Q6UDR6 99 aa7.68□□□□□ -1.18
SAMM50-203ENST00000474323 LRP1Q07954 4544 aaKnown RBP7.65□□□□□ -1.18
SAMM50-203ENST00000474323 PKHD1L1Q86WI1 4243 aa7.64□□□□□ -1.19
SAMM50-203ENST00000474323 TPRXLQ17RH7 258 aa7.63□□□□□ -1.19
SAMM50-203ENST00000474323 KRTAP17-1Q9BYP8 105 aa7.63□□□□□ -1.19
SAMM50-203ENST00000474323 C9orf92A6NGG3 77 aa7.63□□□□□ -1.19
SAMM50-203ENST00000474323 KRTAP10-6P60371 365 aaPredicted RBP7.57□□□□□ -1.2
SAMM50-203ENST00000474323 KRTAP15-1Q3LI76 137 aa7.56□□□□□ -1.2
SAMM50-203ENST00000474323 TNXBP22105 4242 aa7.55□□□□□ -1.2
SAMM50-203ENST00000474323 MYCBP2O75592 4640 aa7.55□□□□□ -1.2
SAMM50-203ENST00000474323 KRTAP13-4Q3LI77 160 aa7.54□□□□□ -1.2
SAMM50-203ENST00000474323 FAT3Q8TDW7 4589 aa7.52□□□□□ -1.21
SAMM50-203ENST00000474323 A0A0D9SG42 100 aa7.52□□□□□ -1.21
SAMM50-203ENST00000474323 DMBT1Q9UGM3 2413 aaPredicted RBP7.51□□□□□ -1.21
SAMM50-203ENST00000474323 C10orf95Q9H7T3 257 aa7.49□□□□□ -1.21
SAMM50-203ENST00000474323 KRTAP10-8P60410 259 aa7.49□□□□□ -1.21
SAMM50-203ENST00000474323 CAMK2N1Q7Z7J9 78 aa7.47□□□□□ -1.21
SAMM50-203ENST00000474323 KRTAP3-3Q9BYR6 98 aa7.47□□□□□ -1.21
SAMM50-203ENST00000474323 KRTAP3-2Q9BYR7 98 aa7.47□□□□□ -1.21
SAMM50-203ENST00000474323 KRTAP23-1A1A580 65 aa7.44□□□□□ -1.22
SAMM50-203ENST00000474323 S4R3F8 94 aa7.41□□□□□ -1.22
SAMM50-203ENST00000474323 KRTAP4-5Q9BYR2 181 aa7.4□□□□□ -1.22
SAMM50-203ENST00000474323 MT1HL1P0DM35 61 aa7.38□□□□□ -1.23
SAMM50-203ENST00000474323 KRTAP12-2P59991 146 aa7.34□□□□□ -1.23
SAMM50-203ENST00000474323 ABCA13Q86UQ4 5058 aa7.33□□□□□ -1.24
SAMM50-203ENST00000474323 XP32Q5T750 250 aa7.3□□□□□ -1.24
SAMM50-203ENST00000474323 BIRC6Q9NR09 4857 aa7.3□□□□□ -1.24
SAMM50-203ENST00000474323 KRTAP12-1P59990 96 aa7.28□□□□□ -1.24
SAMM50-203ENST00000474323 HERC2O95714 4834 aa7.25□□□□□ -1.25
SAMM50-203ENST00000474323 M0QZ58 72 aa7.16□□□□□ -1.26
SAMM50-203ENST00000474323 LPAP08519 4548 aa7.11□□□□□ -1.27
SAMM50-203ENST00000474323 LRP2P98164 4655 aa7.09□□□□□ -1.27
SAMM50-203ENST00000474323 PCLOQ9Y6V0 5065 aa7.04□□□□□ -1.28
SAMM50-203ENST00000474323 PLAC4Q8WY50 150 aa7.02□□□□□ -1.29
SAMM50-203ENST00000474323 HERC1Q15751 4861 aa6.94□□□□□ -1.3
SAMM50-203ENST00000474323 R4GN34 69 aa6.84□□□□□ -1.31
SAMM50-203ENST00000474323 HMCN2Q8NDA2 5059 aa6.8□□□□□ -1.32
SAMM50-203ENST00000474323 PP632Q6XCG6 107 aa6.79□□□□□ -1.32
SAMM50-203ENST00000474323 PRO2289Q9P1D8 64 aa6.76□□□□□ -1.33
SAMM50-203ENST00000474323 MUC17Q685J3 4493 aa6.76□□□□□ -1.33
SAMM50-203ENST00000474323 KRTAP4-1Q9BYQ7 146 aa6.74□□□□□ -1.33
SAMM50-203ENST00000474323 MUC2Q02817 5179 aa6.73□□□□□ -1.33
SAMM50-203ENST00000474323 LORP23490 312 aaPredicted RBP6.62□□□□□ -1.35
SAMM50-203ENST00000474323 UBR4Q5T4S7 5183 aa6.58□□□□□ -1.36
SAMM50-203ENST00000474323 KRTAP19-2Q3LHN2 52 aa6.53□□□□□ -1.36
SAMM50-203ENST00000474323 RNF213Q63HN8 5207 aa6.51□□□□□ -1.37
SAMM50-203ENST00000474323 SPRR5A0A1B0GTR4 108 aa6.48□□□□□ -1.37
SAMM50-203ENST00000474323 FLGP20930 4061 aaPredicted RBP6.45□□□□□ -1.38
SAMM50-203ENST00000474323 LCE2AQ5TA79 106 aaPredicted RBP6.44□□□□□ -1.38
SAMM50-203ENST00000474323 FAT4Q6V0I7 4981 aa6.43□□□□□ -1.38
SAMM50-203ENST00000474323 LCE2CQ5TA81 110 aa6.4□□□□□ -1.39
SAMM50-203ENST00000474323 TNP1P09430 55 aa6.39□□□□□ -1.39
SAMM50-203ENST00000474323 LCE2DQ5TA82 110 aaPredicted RBP6.39□□□□□ -1.39
SAMM50-203ENST00000474323 M0R2T5 61 aa6.22□□□□□ -1.41
SAMM50-203ENST00000474323 MT1HP80294 61 aa6.21□□□□□ -1.42
SAMM50-203ENST00000474323 INE1O15225 51 aa6.21□□□□□ -1.42
SAMM50-203ENST00000474323 LCE2BO14633 110 aa6.01□□□□□ -1.45
SAMM50-203ENST00000474323 MT2AP02795 61 aa6□□□□□ -1.45
SAMM50-203ENST00000474323 KRTAP9-8Q9BYQ0 159 aa6□□□□□ -1.45
SAMM50-203ENST00000474323 MT1FP04733 61 aa5.98□□□□□ -1.45
SAMM50-203ENST00000474323 KRTAP10-10P60014 251 aa5.98□□□□□ -1.45
SAMM50-203ENST00000474323 LCE3AQ5TA76 89 aa5.95□□□□□ -1.46
SAMM50-203ENST00000474323 SPRR2GQ9BYE4 73 aa5.91□□□□□ -1.46
SAMM50-203ENST00000474323 KRTAP19-1Q8IUB9 90 aa5.91□□□□□ -1.46
SAMM50-203ENST00000474323 KRTAP8-1Q8IUC2 63 aa5.85□□□□□ -1.47
SAMM50-203ENST00000474323 KRTAP9-3Q9BYQ3 159 aa5.76□□□□□ -1.49
SAMM50-203ENST00000474323 KRTAP19-8Q3LI54 63 aa5.71□□□□□ -1.5
SAMM50-203ENST00000474323 MT1BP07438 61 aa5.67□□□□□ -1.5
SAMM50-203ENST00000474323 KRTAP12-3P60328 96 aa5.66□□□□□ -1.5
SAMM50-203ENST00000474323 KRTAP10-12P60413 245 aa5.65□□□□□ -1.51
SAMM50-203ENST00000474323 USH2AO75445 5202 aa5.61□□□□□ -1.51
SAMM50-203ENST00000474323 KRTAP10-5P60370 271 aa5.55□□□□□ -1.52
SAMM50-203ENST00000474323 MT1XP80297 61 aa5.52□□□□□ -1.53
SAMM50-203ENST00000474323 FSIP2Q5CZC0 6907 aa5.4□□□□□ -1.54
SAMM50-203ENST00000474323 KRTAP10-7P60409 375 aaPredicted RBP5.4□□□□□ -1.54
SAMM50-203ENST00000474323 LCE3CQ5T5A8 94 aa5.37□□□□□ -1.55
SAMM50-203ENST00000474323 SSPOA2VEC9 5147 aa5.36□□□□□ -1.55
SAMM50-203ENST00000474323 KRTAP9-2Q9BYQ4 174 aa5.28□□□□□ -1.56
SAMM50-203ENST00000474323 KRTAP19-5Q3LI72 72 aa5.26□□□□□ -1.57
SAMM50-203ENST00000474323 KRTAP2-2Q9BYT5 123 aa5.25□□□□□ -1.57
SAMM50-203ENST00000474323 KMT2DO14686 5537 aa5.25□□□□□ -1.57
SAMM50-203ENST00000474323 KRTAP2-3P0C7H8 128 aa5.22□□□□□ -1.57
SAMM50-203ENST00000474323 KRTAP2-4Q9BYR9 128 aa5.22□□□□□ -1.57
SAMM50-203ENST00000474323 KRTAP2-1Q9BYU5 128 aa5.22□□□□□ -1.57
SAMM50-203ENST00000474323 KRTAP9-6A8MVA2 160 aa5.19□□□□□ -1.58
SAMM50-203ENST00000474323 KRTAP19-6Q3LI70 58 aa5.18□□□□□ -1.58
SAMM50-203ENST00000474323 KRTAP9-6A0A140TA67 174 aa5.14□□□□□ -1.59
SAMM50-203ENST00000474323 KRTAP4-8A0A0G2JLE6 195 aa5.13□□□□□ -1.59
SAMM50-203ENST00000474323 KRTAP4-8Q9BYQ9 185 aa5.13□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 91 ms