RNA–Protein interactions for RNA: ENST00000473371.1

NHLRC3-204, Transcript of NHL repeat containing 3, humanhuman

TSL 2

Gene NHLRC3, Length 3,237 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-204ENST00000473371 KMT2CQ8NEZ4 4911 aaKnown RBP7.38□□□□□ -1.23
NHLRC3-204ENST00000473371 A0A1B0GVY2 172 aa7.37□□□□□ -1.23
NHLRC3-204ENST00000473371 RPL37P61927 97 aaKnown RBP7.35□□□□□ -1.23
NHLRC3-204ENST00000473371 KRTAP10-6P60371 365 aaPredicted RBP7.35□□□□□ -1.23
NHLRC3-204ENST00000473371 A0A0D9SG42 100 aa7.34□□□□□ -1.23
NHLRC3-204ENST00000473371 DMBT1Q9UGM3 2413 aaPredicted RBP7.34□□□□□ -1.24
NHLRC3-204ENST00000473371 KRTAP3-3Q9BYR6 98 aa7.33□□□□□ -1.24
NHLRC3-204ENST00000473371 RYR3Q15413 4870 aa7.33□□□□□ -1.24
NHLRC3-204ENST00000473371 KRTAP13-4Q3LI77 160 aa7.32□□□□□ -1.24
NHLRC3-204ENST00000473371 SEC61BP60468 96 aaKnown RBP7.3□□□□□ -1.24
NHLRC3-204ENST00000473371 FAT3Q8TDW7 4589 aa7.28□□□□□ -1.24
NHLRC3-204ENST00000473371 S4R3F8 94 aa7.28□□□□□ -1.24
NHLRC3-204ENST00000473371 KRTAP3-2Q9BYR7 98 aa7.27□□□□□ -1.24
NHLRC3-204ENST00000473371 KRTAP10-8P60410 259 aa7.24□□□□□ -1.25
NHLRC3-204ENST00000473371 P0C880 135 aa7.2□□□□□ -1.26
NHLRC3-204ENST00000473371 XP32Q5T750 250 aa7.2□□□□□ -1.26
NHLRC3-204ENST00000473371 HSPG2P98160 4391 aa7.19□□□□□ -1.26
NHLRC3-204ENST00000473371 TPRXLQ17RH7 258 aa7.19□□□□□ -1.26
NHLRC3-204ENST00000473371 LRP1Q07954 4544 aaKnown RBP7.18□□□□□ -1.26
NHLRC3-204ENST00000473371 TNXBP22105 4242 aa7.17□□□□□ -1.26
NHLRC3-204ENST00000473371 SPINT4Q6UDR6 99 aa7.15□□□□□ -1.27
NHLRC3-204ENST00000473371 C10orf95Q9H7T3 257 aa7.14□□□□□ -1.27
NHLRC3-204ENST00000473371 KRTAP12-2P59991 146 aa7.1□□□□□ -1.27
NHLRC3-204ENST00000473371 Q5VSD8 79 aa7.1□□□□□ -1.27
NHLRC3-204ENST00000473371 MYCBP2O75592 4640 aa7.09□□□□□ -1.27
NHLRC3-204ENST00000473371 RYR1P21817 5038 aa7.08□□□□□ -1.28
NHLRC3-204ENST00000473371 KRTAP12-1P59990 96 aa7.03□□□□□ -1.28
NHLRC3-204ENST00000473371 EPPK1P58107 5090 aaKnown RBP6.97□□□□□ -1.29
NHLRC3-204ENST00000473371 M0QZ58 72 aa6.96□□□□□ -1.3
NHLRC3-204ENST00000473371 LUZP6Q538Z0 58 aa6.95□□□□□ -1.3
NHLRC3-204ENST00000473371 KRTAP15-1Q3LI76 137 aa6.93□□□□□ -1.3
NHLRC3-204ENST00000473371 KRTAP17-1Q9BYP8 105 aa6.92□□□□□ -1.3
NHLRC3-204ENST00000473371 MT1HL1P0DM35 61 aa6.91□□□□□ -1.3
NHLRC3-204ENST00000473371 NDUFAF8A1L188 74 aa6.87□□□□□ -1.31
NHLRC3-204ENST00000473371 LPAP08519 4548 aa6.87□□□□□ -1.31
NHLRC3-204ENST00000473371 BIRC6Q9NR09 4857 aa6.85□□□□□ -1.31
NHLRC3-204ENST00000473371 HERC2O95714 4834 aa6.84□□□□□ -1.31
NHLRC3-204ENST00000473371 LRP2P98164 4655 aa6.82□□□□□ -1.32
NHLRC3-204ENST00000473371 R4GN34 69 aa6.78□□□□□ -1.32
NHLRC3-204ENST00000473371 KIAA1109Q2LD37 5005 aa6.72□□□□□ -1.33
NHLRC3-204ENST00000473371 ABCA13Q86UQ4 5058 aa6.67□□□□□ -1.34
NHLRC3-204ENST00000473371 LORP23490 312 aaPredicted RBP6.63□□□□□ -1.35
NHLRC3-204ENST00000473371 MUC17Q685J3 4493 aa6.59□□□□□ -1.36
NHLRC3-204ENST00000473371 PLAC4Q8WY50 150 aa6.57□□□□□ -1.36
NHLRC3-204ENST00000473371 KRTAP4-5Q9BYR2 181 aa6.53□□□□□ -1.36
NHLRC3-204ENST00000473371 KRTAP4-1Q9BYQ7 146 aa6.5□□□□□ -1.37
NHLRC3-204ENST00000473371 CAMK2N1Q7Z7J9 78 aa6.48□□□□□ -1.37
NHLRC3-204ENST00000473371 PP632Q6XCG6 107 aa6.43□□□□□ -1.38
NHLRC3-204ENST00000473371 PCLOQ9Y6V0 5065 aa6.39□□□□□ -1.39
NHLRC3-204ENST00000473371 KRTAP19-2Q3LHN2 52 aa6.37□□□□□ -1.39
NHLRC3-204ENST00000473371 HMCN2Q8NDA2 5059 aa6.25□□□□□ -1.41
NHLRC3-204ENST00000473371 TNP1P09430 55 aa6.24□□□□□ -1.41
NHLRC3-204ENST00000473371 FLGP20930 4061 aaPredicted RBP6.2□□□□□ -1.42
NHLRC3-204ENST00000473371 KRTAP23-1A1A580 65 aa6.2□□□□□ -1.42
NHLRC3-204ENST00000473371 HERC1Q15751 4861 aa6.14□□□□□ -1.43
NHLRC3-204ENST00000473371 MUC2Q02817 5179 aa6.12□□□□□ -1.43
NHLRC3-204ENST00000473371 SPRR5A0A1B0GTR4 108 aa6.04□□□□□ -1.44
NHLRC3-204ENST00000473371 SPRR2GQ9BYE4 73 aa5.96□□□□□ -1.46
NHLRC3-204ENST00000473371 KRTAP19-1Q8IUB9 90 aa5.92□□□□□ -1.46
NHLRC3-204ENST00000473371 LCE2CQ5TA81 110 aa5.92□□□□□ -1.46
NHLRC3-204ENST00000473371 M0R2T5 61 aa5.89□□□□□ -1.47
NHLRC3-204ENST00000473371 LCE2DQ5TA82 110 aaPredicted RBP5.89□□□□□ -1.47
NHLRC3-204ENST00000473371 LCE3AQ5TA76 89 aa5.88□□□□□ -1.47
NHLRC3-204ENST00000473371 FAT4Q6V0I7 4981 aa5.83□□□□□ -1.48
NHLRC3-204ENST00000473371 KRTAP10-10P60014 251 aa5.78□□□□□ -1.48
NHLRC3-204ENST00000473371 PRO2289Q9P1D8 64 aa5.77□□□□□ -1.49
NHLRC3-204ENST00000473371 MT1HP80294 61 aa5.76□□□□□ -1.49
NHLRC3-204ENST00000473371 RNF213Q63HN8 5207 aa5.76□□□□□ -1.49
NHLRC3-204ENST00000473371 MT1FP04733 61 aa5.74□□□□□ -1.49
NHLRC3-204ENST00000473371 MT2AP02795 61 aa5.73□□□□□ -1.49
NHLRC3-204ENST00000473371 KRTAP8-1Q8IUC2 63 aa5.7□□□□□ -1.5
NHLRC3-204ENST00000473371 UBR4Q5T4S7 5183 aa5.66□□□□□ -1.5
NHLRC3-204ENST00000473371 KRTAP19-8Q3LI54 63 aa5.65□□□□□ -1.5
NHLRC3-204ENST00000473371 KRTAP9-8Q9BYQ0 159 aa5.65□□□□□ -1.51
NHLRC3-204ENST00000473371 KRTAP10-5P60370 271 aa5.61□□□□□ -1.51
NHLRC3-204ENST00000473371 MT1XP80297 61 aa5.6□□□□□ -1.51
NHLRC3-204ENST00000473371 MT1BP07438 61 aa5.59□□□□□ -1.51
NHLRC3-204ENST00000473371 KRTAP12-3P60328 96 aa5.58□□□□□ -1.52
NHLRC3-204ENST00000473371 KRTAP10-12P60413 245 aa5.57□□□□□ -1.52
NHLRC3-204ENST00000473371 LCE2AQ5TA79 106 aaPredicted RBP5.53□□□□□ -1.52
NHLRC3-204ENST00000473371 INE1O15225 51 aa5.5□□□□□ -1.53
NHLRC3-204ENST00000473371 KRTAP10-7P60409 375 aaPredicted RBP5.48□□□□□ -1.53
NHLRC3-204ENST00000473371 KRTAP9-3Q9BYQ3 159 aa5.4□□□□□ -1.55
NHLRC3-204ENST00000473371 KRTAP19-5Q3LI72 72 aa5.29□□□□□ -1.56
NHLRC3-204ENST00000473371 KRTAP9-6A0A140TA67 174 aa5.26□□□□□ -1.57
NHLRC3-204ENST00000473371 LCE3CQ5T5A8 94 aa5.26□□□□□ -1.57
NHLRC3-204ENST00000473371 LCE2BO14633 110 aa5.2□□□□□ -1.58
NHLRC3-204ENST00000473371 KRTAP4-8A0A0G2JLE6 195 aa5.1□□□□□ -1.59
NHLRC3-204ENST00000473371 KRTAP4-8Q9BYQ9 185 aa5.1□□□□□ -1.59
NHLRC3-204ENST00000473371 KMT2DO14686 5537 aa5.09□□□□□ -1.59
NHLRC3-204ENST00000473371 KRTAP9-6A8MVA2 160 aa5.08□□□□□ -1.6
NHLRC3-204ENST00000473371 KRTAP9-2Q9BYQ4 174 aa5.03□□□□□ -1.6
NHLRC3-204ENST00000473371 USH2AO75445 5202 aa5.03□□□□□ -1.6
NHLRC3-204ENST00000473371 KRTAP19-7Q3SYF9 63 aa4.98□□□□□ -1.61
NHLRC3-204ENST00000473371 KRTAP4-7Q9BYR0 210 aa4.98□□□□□ -1.61
NHLRC3-204ENST00000473371 KRTAP2-3P0C7H8 128 aa4.95□□□□□ -1.62
NHLRC3-204ENST00000473371 KRTAP2-4Q9BYR9 128 aa4.95□□□□□ -1.62
NHLRC3-204ENST00000473371 KRTAP2-1Q9BYU5 128 aa4.95□□□□□ -1.62
NHLRC3-204ENST00000473371 SSPOA2VEC9 5147 aa4.9□□□□□ -1.62
NHLRC3-204ENST00000473371 KRTAP19-4Q3LI73 84 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms