RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 KLKP1Q107X0 134 aa10.15□□□□□ -0.78
PTP4A1-203ENST00000473334 SYNE2Q8WXH0 6885 aaKnown RBP10.11□□□□□ -0.79
PTP4A1-203ENST00000473334 Q5VV11 94 aa10.11□□□□□ -0.79
PTP4A1-203ENST00000473334 MT1BP07438 61 aa10.1□□□□□ -0.79
PTP4A1-203ENST00000473334 KRTAP19-8Q3LI54 63 aa10.1□□□□□ -0.79
PTP4A1-203ENST00000473334 LINC00208Q96KT6 92 aa10.08□□□□□ -0.8
PTP4A1-203ENST00000473334 OCR1Q9BZK8 76 aa10.06□□□□□ -0.8
PTP4A1-203ENST00000473334 A8MUN3 132 aa10.05□□□□□ -0.8
PTP4A1-203ENST00000473334 NDUFC1O43677 76 aa10.05□□□□□ -0.8
PTP4A1-203ENST00000473334 IMUPQ9GZP8 106 aa10.04□□□□□ -0.8
PTP4A1-203ENST00000473334 MP68P56378 58 aa10.03□□□□□ -0.8
PTP4A1-203ENST00000473334 J3QR89 54 aa10.01□□□□□ -0.81
PTP4A1-203ENST00000473334 CRIPTQ9P021 101 aa10.01□□□□□ -0.81
PTP4A1-203ENST00000473334 A6NN06 94 aa9.99□□□□□ -0.81
PTP4A1-203ENST00000473334 H0YAA0 97 aa9.97□□□□□ -0.81
PTP4A1-203ENST00000473334 KRTAP6-3Q3LI67 103 aa9.92□□□□□ -0.82
PTP4A1-203ENST00000473334 H3BPC8 53 aa9.9□□□□□ -0.82
PTP4A1-203ENST00000473334 KRTAP10-5P60370 271 aa9.88□□□□□ -0.83
PTP4A1-203ENST00000473334 SCGB1A1P11684 91 aa9.85□□□□□ -0.83
PTP4A1-203ENST00000473334 ADM2Q7Z4H4 148 aa9.85□□□□□ -0.83
PTP4A1-203ENST00000473334 DMAC1Q96GE9 116 aa9.76□□□□□ -0.85
PTP4A1-203ENST00000473334 MT-ATP8P03928 68 aa9.65□□□□□ -0.86
PTP4A1-203ENST00000473334 C20orf197Q8N268 126 aa9.64□□□□□ -0.87
PTP4A1-203ENST00000473334 K7ERU9 68 aa9.63□□□□□ -0.87
PTP4A1-203ENST00000473334 P0C880 135 aa9.62□□□□□ -0.87
PTP4A1-203ENST00000473334 R4GN34 69 aa9.61□□□□□ -0.87
PTP4A1-203ENST00000473334 SMIM20Q8N5G0 67 aa9.6□□□□□ -0.87
PTP4A1-203ENST00000473334 TRAV7A0A075B6U4 112 aa9.58□□□□□ -0.88
PTP4A1-203ENST00000473334 PLAC4Q8WY50 150 aa9.54□□□□□ -0.88
PTP4A1-203ENST00000473334 M0QZ58 72 aa9.53□□□□□ -0.88
PTP4A1-203ENST00000473334 ACYP2P14621 99 aa9.53□□□□□ -0.88
PTP4A1-203ENST00000473334 KRTAP3-2Q9BYR7 98 aa9.53□□□□□ -0.88
PTP4A1-203ENST00000473334 MUC12Q9UKN1 5478 aa9.53□□□□□ -0.88
PTP4A1-203ENST00000473334 PRO2289Q9P1D8 64 aa9.52□□□□□ -0.89
PTP4A1-203ENST00000473334 KRTAP5-9P26371 169 aa9.48□□□□□ -0.89
PTP4A1-203ENST00000473334 MT1XP80297 61 aa9.48□□□□□ -0.89
PTP4A1-203ENST00000473334 NEBP20929 6669 aa9.48□□□□□ -0.89
PTP4A1-203ENST00000473334 SPTSSBQ8NFR3 76 aa9.43□□□□□ -0.9
PTP4A1-203ENST00000473334 LINC01554Q52M75 96 aa9.38□□□□□ -0.91
PTP4A1-203ENST00000473334 SNURFQ9Y675 71 aa9.38□□□□□ -0.91
PTP4A1-203ENST00000473334 CHKB-CPT1BH3BT56 60 aa9.36□□□□□ -0.91
PTP4A1-203ENST00000473334 KMT2DO14686 5537 aa9.36□□□□□ -0.91
PTP4A1-203ENST00000473334 KRTAP20-1Q3LI63 56 aa9.3□□□□□ -0.92
PTP4A1-203ENST00000473334 MDN1Q9NU22 5596 aa9.3□□□□□ -0.92
PTP4A1-203ENST00000473334 SPANXA2-OT1Q8N9U9 137 aa9.28□□□□□ -0.92
PTP4A1-203ENST00000473334 KRTAP12-2P59991 146 aa9.26□□□□□ -0.93
PTP4A1-203ENST00000473334 SERP2Q8N6R1 65 aa9.26□□□□□ -0.93
PTP4A1-203ENST00000473334 SPRR2FQ96RM1 72 aa9.2□□□□□ -0.94
PTP4A1-203ENST00000473334 KRTAP8-1Q8IUC2 63 aa9.18□□□□□ -0.94
PTP4A1-203ENST00000473334 SPRR2EP22531 72 aa9.07□□□□□ -0.96
PTP4A1-203ENST00000473334 SPRR2BP35325 72 aa9.07□□□□□ -0.96
PTP4A1-203ENST00000473334 SPRR2AP35326 72 aa9.07□□□□□ -0.96
PTP4A1-203ENST00000473334 KRTAP4-8A0A0G2JLE6 195 aa9.04□□□□□ -0.96
PTP4A1-203ENST00000473334 KRTAP10-7P60409 375 aaPredicted RBP9.04□□□□□ -0.96
PTP4A1-203ENST00000473334 KRTAP4-8Q9BYQ9 185 aa9.04□□□□□ -0.96
PTP4A1-203ENST00000473334 COA5Q86WW8 74 aa9.02□□□□□ -0.97
PTP4A1-203ENST00000473334 KRTAP2-3P0C7H8 128 aa9.01□□□□□ -0.97
PTP4A1-203ENST00000473334 KRTAP10-12P60413 245 aa9.01□□□□□ -0.97
PTP4A1-203ENST00000473334 KRTAP2-4Q9BYR9 128 aa9.01□□□□□ -0.97
PTP4A1-203ENST00000473334 KRTAP13-4Q3LI77 160 aa8.99□□□□□ -0.97
PTP4A1-203ENST00000473334 COX7CP15954 63 aa8.97□□□□□ -0.97
PTP4A1-203ENST00000473334 LCE1AQ5T7P2 110 aa8.94□□□□□ -0.98
PTP4A1-203ENST00000473334 SEC61GP60059 68 aa8.86□□□□□ -0.99
PTP4A1-203ENST00000473334 SERP1Q9Y6X1 66 aa8.85□□□□□ -0.99
PTP4A1-203ENST00000473334 H7BZZ5 65 aa8.84□□□□□ -0.99
PTP4A1-203ENST00000473334 CAMK2N1Q7Z7J9 78 aa8.83□□□□□ -1
PTP4A1-203ENST00000473334 CYSTM1Q9H1C7 97 aa8.82□□□□□ -1
PTP4A1-203ENST00000473334 SPRR2DP22532 72 aa8.76□□□□□ -1.01
PTP4A1-203ENST00000473334 A0A0D9SG42 100 aa8.72□□□□□ -1.01
PTP4A1-203ENST00000473334 A0A1B0GU33 70 aa8.7□□□□□ -1.02
PTP4A1-203ENST00000473334 SPATA8Q6RVD6 105 aa8.7□□□□□ -1.02
PTP4A1-203ENST00000473334 KRTAP2-2Q9BYT5 123 aa8.7□□□□□ -1.02
PTP4A1-203ENST00000473334 KRTAP2-1Q9BYU5 128 aa8.7□□□□□ -1.02
PTP4A1-203ENST00000473334 ANAPC13Q9BS18 74 aa8.65□□□□□ -1.02
PTP4A1-203ENST00000473334 SPINT4Q6UDR6 99 aa8.6□□□□□ -1.03
PTP4A1-203ENST00000473334 A0A1B0GU69 56 aa8.56□□□□□ -1.04
PTP4A1-203ENST00000473334 KRTAP12-1P59990 96 aa8.55□□□□□ -1.04
PTP4A1-203ENST00000473334 LCE3BQ5TA77 95 aa8.52□□□□□ -1.05
PTP4A1-203ENST00000473334 SMIM26A0A096LP01 95 aa8.47□□□□□ -1.05
PTP4A1-203ENST00000473334 CCDC179H3BU77 68 aa8.47□□□□□ -1.05
PTP4A1-203ENST00000473334 KRTAP19-7Q3SYF9 63 aa8.47□□□□□ -1.05
PTP4A1-203ENST00000473334 MT1EP04732 61 aa8.4□□□□□ -1.06
PTP4A1-203ENST00000473334 ATP5EP56381 51 aaPredicted RBP8.4□□□□□ -1.06
PTP4A1-203ENST00000473334 A8MU10 97 aa8.38□□□□□ -1.07
PTP4A1-203ENST00000473334 LCE5AQ5TCM9 118 aa8.34□□□□□ -1.07
PTP4A1-203ENST00000473334 KRTAP19-3Q7Z4W3 81 aa8.33□□□□□ -1.08
PTP4A1-203ENST00000473334 PRR15LQ9BU68 103 aa8.31□□□□□ -1.08
PTP4A1-203ENST00000473334 KRTAP19-5Q3LI72 72 aa8.26□□□□□ -1.09
PTP4A1-203ENST00000473334 LINC01558Q9Y6Z2 57 aa8.23□□□□□ -1.09
PTP4A1-203ENST00000473334 DSTQ03001 7570 aaKnown RBP8.17□□□□□ -1.1
PTP4A1-203ENST00000473334 TMEM258P61165 79 aa8.17□□□□□ -1.1
PTP4A1-203ENST00000473334 C10orf95Q9H7T3 257 aa8.17□□□□□ -1.1
PTP4A1-203ENST00000473334 TNP1P09430 55 aa8.15□□□□□ -1.1
PTP4A1-203ENST00000473334 MT1GP13640 62 aa8.13□□□□□ -1.11
PTP4A1-203ENST00000473334 LCE3AQ5TA76 89 aa8.09□□□□□ -1.11
PTP4A1-203ENST00000473334 PP632Q6XCG6 107 aa8.08□□□□□ -1.12
PTP4A1-203ENST00000473334 UQCR11O14957 56 aa8.03□□□□□ -1.12
PTP4A1-203ENST00000473334 MT1LQ93083 61 aa8.03□□□□□ -1.12
PTP4A1-203ENST00000473334 MT1MQ8N339 61 aa8□□□□□ -1.13
PTP4A1-203ENST00000473334 KRTAP4-9Q9BYQ8 210 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms