RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, humanhuman

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-223ENST00000472807 HCG22E2RYF7 251 aa4.21□□□□□ -1.74
CHEK2-223ENST00000472807 MT-ATP8P03928 68 aa4.21□□□□□ -1.74
CHEK2-223ENST00000472807 KRTAP19-6Q3LI70 58 aa4.21□□□□□ -1.74
CHEK2-223ENST00000472807 Q5W150 140 aa4.21□□□□□ -1.74
CHEK2-223ENST00000472807 IMUPQ9GZP8 106 aa4.21□□□□□ -1.74
CHEK2-223ENST00000472807 CXCL6P80162 114 aa4.19□□□□□ -1.74
CHEK2-223ENST00000472807 ATP5EP2Q5VTU8 51 aa4.18□□□□□ -1.74
CHEK2-223ENST00000472807 UBL5Q9BZL1 73 aa4.18□□□□□ -1.74
CHEK2-223ENST00000472807 C4orf26Q17RF5 130 aa4.17□□□□□ -1.74
CHEK2-223ENST00000472807 C5orf47Q569G3 176 aa4.13□□□□□ -1.75
CHEK2-223ENST00000472807 FAM236AA0A1B0GUQ0 79 aa4.12□□□□□ -1.75
CHEK2-223ENST00000472807 FAM236BA0A1B0GV22 79 aa4.12□□□□□ -1.75
CHEK2-223ENST00000472807 S4R3F8 94 aa4.12□□□□□ -1.75
CHEK2-223ENST00000472807 ANAPC13Q9BS18 74 aa4.1□□□□□ -1.75
CHEK2-223ENST00000472807 TP53AIP1Q9HCN2 124 aa4.1□□□□□ -1.75
CHEK2-223ENST00000472807 HIST1H4AP62805 103 aaKnown RBP4.09□□□□□ -1.75
CHEK2-223ENST00000472807 C1orf64Q8NEQ6 169 aa4.09□□□□□ -1.75
CHEK2-223ENST00000472807 ATOX1O00244 68 aa4.08□□□□□ -1.76
CHEK2-223ENST00000472807 CSAG1Q6PB30 78 aa4.08□□□□□ -1.76
CHEK2-223ENST00000472807 MUC12Q9UKN1 5478 aa4.08□□□□□ -1.76
CHEK2-223ENST00000472807 LCA10Q71F78 164 aa4.07□□□□□ -1.76
CHEK2-223ENST00000472807 KRTAP6-3Q3LI67 103 aa4.05□□□□□ -1.76
CHEK2-223ENST00000472807 Q5VV11 94 aa4.04□□□□□ -1.76
CHEK2-223ENST00000472807 SMIM20Q8N5G0 67 aa4.03□□□□□ -1.76
CHEK2-223ENST00000472807 A0A087WVE0 104 aa4.02□□□□□ -1.77
CHEK2-223ENST00000472807 A6NN06 94 aa4.02□□□□□ -1.77
CHEK2-223ENST00000472807 UQCRQO14949 82 aa4.02□□□□□ -1.77
CHEK2-223ENST00000472807 SPRR2GQ9BYE4 73 aa4.02□□□□□ -1.77
CHEK2-223ENST00000472807 COX7CP15954 63 aa4.01□□□□□ -1.77
CHEK2-223ENST00000472807 SERP2Q8N6R1 65 aa4.01□□□□□ -1.77
CHEK2-223ENST00000472807 CYP4F30PQ9H0H9 118 aa4.01□□□□□ -1.77
CHEK2-223ENST00000472807 NEBP20929 6669 aa4.01□□□□□ -1.77
CHEK2-223ENST00000472807 TRAV22A0A0B4J277 110 aa4□□□□□ -1.77
CHEK2-223ENST00000472807 MT1BP07438 61 aa4□□□□□ -1.77
CHEK2-223ENST00000472807 KLKP1Q107X0 134 aa4□□□□□ -1.77
CHEK2-223ENST00000472807 LOC101927531A0A1B0GV80 90 aa3.99□□□□□ -1.77
CHEK2-223ENST00000472807 KRTAP19-8Q3LI54 63 aa3.99□□□□□ -1.77
CHEK2-223ENST00000472807 MDN1Q9NU22 5596 aa3.99□□□□□ -1.77
CHEK2-223ENST00000472807 TRAV7A0A075B6U4 112 aa3.98□□□□□ -1.77
CHEK2-223ENST00000472807 CCDC179H3BU77 68 aa3.98□□□□□ -1.77
CHEK2-223ENST00000472807 CRIPTQ9P021 101 aa3.95□□□□□ -1.78
CHEK2-223ENST00000472807 KRTAP10-5P60370 271 aa3.94□□□□□ -1.78
CHEK2-223ENST00000472807 KMT2DO14686 5537 aa3.94□□□□□ -1.78
CHEK2-223ENST00000472807 H0Y9P7 68 aa3.92□□□□□ -1.78
CHEK2-223ENST00000472807 NDUFC1O43677 76 aa3.92□□□□□ -1.78
CHEK2-223ENST00000472807 KRTAP15-1Q3LI76 137 aa3.92□□□□□ -1.78
CHEK2-223ENST00000472807 OCR1Q9BZK8 76 aa3.92□□□□□ -1.78
CHEK2-223ENST00000472807 TMEM258P61165 79 aa3.9□□□□□ -1.79
CHEK2-223ENST00000472807 A8MUN3 132 aa3.89□□□□□ -1.79
CHEK2-223ENST00000472807 H0YAA0 97 aa3.89□□□□□ -1.79
CHEK2-223ENST00000472807 C20orf197Q8N268 126 aa3.89□□□□□ -1.79
CHEK2-223ENST00000472807 H3BPC8 53 aa3.85□□□□□ -1.79
CHEK2-223ENST00000472807 ATP5EP56381 51 aaPredicted RBP3.85□□□□□ -1.79
CHEK2-223ENST00000472807 ADM2Q7Z4H4 148 aa3.85□□□□□ -1.79
CHEK2-223ENST00000472807 H7BZZ5 65 aa3.84□□□□□ -1.79
CHEK2-223ENST00000472807 MP68P56378 58 aa3.84□□□□□ -1.79
CHEK2-223ENST00000472807 LINC00208Q96KT6 92 aa3.84□□□□□ -1.79
CHEK2-223ENST00000472807 CYSTM1Q9H1C7 97 aa3.84□□□□□ -1.79
CHEK2-223ENST00000472807 KRTAP5-9P26371 169 aa3.83□□□□□ -1.8
CHEK2-223ENST00000472807 RPS28P62857 69 aaKnown RBP3.83□□□□□ -1.8
CHEK2-223ENST00000472807 SNURFQ9Y675 71 aa3.82□□□□□ -1.8
CHEK2-223ENST00000472807 PRO2289Q9P1D8 64 aa3.81□□□□□ -1.8
CHEK2-223ENST00000472807 KRTAP23-1A1A580 65 aa3.8□□□□□ -1.8
CHEK2-223ENST00000472807 KRTAP20-1Q3LI63 56 aa3.79□□□□□ -1.8
CHEK2-223ENST00000472807 PLAC4Q8WY50 150 aa3.78□□□□□ -1.8
CHEK2-223ENST00000472807 R4GN34 69 aa3.78□□□□□ -1.8
CHEK2-223ENST00000472807 SERP1Q9Y6X1 66 aa3.77□□□□□ -1.81
CHEK2-223ENST00000472807 MT1XP80297 61 aa3.75□□□□□ -1.81
CHEK2-223ENST00000472807 SPANXA2-OT1Q8N9U9 137 aa3.75□□□□□ -1.81
CHEK2-223ENST00000472807 DMAC1Q96GE9 116 aa3.74□□□□□ -1.81
CHEK2-223ENST00000472807 M0QZ58 72 aa3.73□□□□□ -1.81
CHEK2-223ENST00000472807 P0C880 135 aa3.73□□□□□ -1.81
CHEK2-223ENST00000472807 SPRR2FQ96RM1 72 aa3.73□□□□□ -1.81
CHEK2-223ENST00000472807 KRTAP8-1Q8IUC2 63 aa3.7□□□□□ -1.82
CHEK2-223ENST00000472807 SMIM26A0A096LP01 95 aa3.69□□□□□ -1.82
CHEK2-223ENST00000472807 SPRR2EP22531 72 aa3.69□□□□□ -1.82
CHEK2-223ENST00000472807 SPRR2BP35325 72 aa3.69□□□□□ -1.82
CHEK2-223ENST00000472807 SPRR2AP35326 72 aa3.69□□□□□ -1.82
CHEK2-223ENST00000472807 LINC01554Q52M75 96 aa3.69□□□□□ -1.82
CHEK2-223ENST00000472807 KRTAP12-2P59991 146 aa3.68□□□□□ -1.82
CHEK2-223ENST00000472807 KRTAP2-3P0C7H8 128 aa3.67□□□□□ -1.82
CHEK2-223ENST00000472807 KRTAP2-4Q9BYR9 128 aa3.67□□□□□ -1.82
CHEK2-223ENST00000472807 ACYP2P14621 99 aa3.64□□□□□ -1.83
CHEK2-223ENST00000472807 SPTSSBQ8NFR3 76 aa3.64□□□□□ -1.83
CHEK2-223ENST00000472807 V9GYY9 64 aa3.61□□□□□ -1.83
CHEK2-223ENST00000472807 CHKB-CPT1BH3BT56 60 aa3.6□□□□□ -1.83
CHEK2-223ENST00000472807 Q1T7F1 81 aa3.6□□□□□ -1.83
CHEK2-223ENST00000472807 LCE1AQ5T7P2 110 aa3.6□□□□□ -1.83
CHEK2-223ENST00000472807 COA5Q86WW8 74 aa3.59□□□□□ -1.83
CHEK2-223ENST00000472807 SPRR2DP22532 72 aa3.57□□□□□ -1.84
CHEK2-223ENST00000472807 KRTAP10-7P60409 375 aaPredicted RBP3.57□□□□□ -1.84
CHEK2-223ENST00000472807 KRTAP10-12P60413 245 aa3.56□□□□□ -1.84
CHEK2-223ENST00000472807 KRTAP2-2Q9BYT5 123 aa3.54□□□□□ -1.84
CHEK2-223ENST00000472807 KRTAP2-1Q9BYU5 128 aa3.54□□□□□ -1.84
CHEK2-223ENST00000472807 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.51□□□□□ -1.85
CHEK2-223ENST00000472807 LINC01558Q9Y6Z2 57 aa3.51□□□□□ -1.85
CHEK2-223ENST00000472807 CAMK2N1Q7Z7J9 78 aa3.47□□□□□ -1.85
CHEK2-223ENST00000472807 PRR15LQ9BU68 103 aa3.46□□□□□ -1.86
CHEK2-223ENST00000472807 PSPHP1O15172 72 aa3.45□□□□□ -1.86
CHEK2-223ENST00000472807 KRTAP13-4Q3LI77 160 aa3.45□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms