RNA–Protein interactions for RNA: ENST00000472442.2

SCAMP4-207, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2

Gene SCAMP4, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-207ENST00000472442 FLG2Q5D862 2391 aaPredicted RBP7.15□□□□□ -1.27
SCAMP4-207ENST00000472442 KRTAP10-8P60410 259 aa7.14□□□□□ -1.27
SCAMP4-207ENST00000472442 A0A1B0GU33 70 aa7.13□□□□□ -1.27
SCAMP4-207ENST00000472442 C9orf92A6NGG3 77 aa7.11□□□□□ -1.27
SCAMP4-207ENST00000472442 MYCBP2O75592 4640 aa7.1□□□□□ -1.27
SCAMP4-207ENST00000472442 H1FX-AS1Q4G0G2 97 aa7.09□□□□□ -1.27
SCAMP4-207ENST00000472442 KRTAP3-1Q9BYR8 98 aa7.07□□□□□ -1.28
SCAMP4-207ENST00000472442 ROMO1P60602 79 aa7.06□□□□□ -1.28
SCAMP4-207ENST00000472442 C20orf166-AS1Q96NR2 134 aa7.05□□□□□ -1.28
SCAMP4-207ENST00000472442 CRIPTQ9P021 101 aa7.05□□□□□ -1.28
SCAMP4-207ENST00000472442 MT1HL1P0DM35 61 aa7.01□□□□□ -1.29
SCAMP4-207ENST00000472442 DMBT1Q9UGM3 2413 aaPredicted RBP7□□□□□ -1.29
SCAMP4-207ENST00000472442 K7ERS5 55 aa6.97□□□□□ -1.29
SCAMP4-207ENST00000472442 COX6B2Q6YFQ2 88 aa6.96□□□□□ -1.3
SCAMP4-207ENST00000472442 KRTAP4-5Q9BYR2 181 aa6.93□□□□□ -1.3
SCAMP4-207ENST00000472442 P0C880 135 aa6.88□□□□□ -1.31
SCAMP4-207ENST00000472442 XP32Q5T750 250 aa6.86□□□□□ -1.31
SCAMP4-207ENST00000472442 ABCA13Q86UQ4 5058 aa6.85□□□□□ -1.31
SCAMP4-207ENST00000472442 RPL37P61927 97 aaKnown RBP6.83□□□□□ -1.32
SCAMP4-207ENST00000472442 A0A0D9SG42 100 aa6.81□□□□□ -1.32
SCAMP4-207ENST00000472442 KRTAP13-4Q3LI77 160 aa6.8□□□□□ -1.32
SCAMP4-207ENST00000472442 KRTAP10-6P60371 365 aaPredicted RBP6.79□□□□□ -1.32
SCAMP4-207ENST00000472442 TPRXLQ17RH7 258 aa6.78□□□□□ -1.32
SCAMP4-207ENST00000472442 LRP2P98164 4655 aa6.77□□□□□ -1.33
SCAMP4-207ENST00000472442 LPAP08519 4548 aa6.77□□□□□ -1.33
SCAMP4-207ENST00000472442 SPINT4Q6UDR6 99 aa6.76□□□□□ -1.33
SCAMP4-207ENST00000472442 HERC2O95714 4834 aa6.75□□□□□ -1.33
SCAMP4-207ENST00000472442 KRTAP3-3Q9BYR6 98 aa6.74□□□□□ -1.33
SCAMP4-207ENST00000472442 BIRC6Q9NR09 4857 aa6.74□□□□□ -1.33
SCAMP4-207ENST00000472442 C10orf95Q9H7T3 257 aa6.73□□□□□ -1.33
SCAMP4-207ENST00000472442 KRTAP3-2Q9BYR7 98 aa6.71□□□□□ -1.34
SCAMP4-207ENST00000472442 S4R3F8 94 aa6.63□□□□□ -1.35
SCAMP4-207ENST00000472442 J3QL48 77 aa6.6□□□□□ -1.35
SCAMP4-207ENST00000472442 KRTAP12-2P59991 146 aa6.6□□□□□ -1.35
SCAMP4-207ENST00000472442 NDUFAF8A1L188 74 aa6.6□□□□□ -1.35
SCAMP4-207ENST00000472442 KRTAP15-1Q3LI76 137 aa6.6□□□□□ -1.35
SCAMP4-207ENST00000472442 KRTAP12-1P59990 96 aa6.51□□□□□ -1.37
SCAMP4-207ENST00000472442 PCLOQ9Y6V0 5065 aa6.5□□□□□ -1.37
SCAMP4-207ENST00000472442 MUC17Q685J3 4493 aa6.49□□□□□ -1.37
SCAMP4-207ENST00000472442 HERC1Q15751 4861 aa6.45□□□□□ -1.38
SCAMP4-207ENST00000472442 SEC61BP60468 96 aaKnown RBP6.44□□□□□ -1.38
SCAMP4-207ENST00000472442 KRTAP4-1Q9BYQ7 146 aa6.44□□□□□ -1.38
SCAMP4-207ENST00000472442 HMCN2Q8NDA2 5059 aa6.37□□□□□ -1.39
SCAMP4-207ENST00000472442 MUC2Q02817 5179 aa6.36□□□□□ -1.39
SCAMP4-207ENST00000472442 M0QZ58 72 aa6.35□□□□□ -1.39
SCAMP4-207ENST00000472442 KRTAP19-2Q3LHN2 52 aa6.3□□□□□ -1.4
SCAMP4-207ENST00000472442 R4GN34 69 aa6.18□□□□□ -1.42
SCAMP4-207ENST00000472442 PLAC4Q8WY50 150 aa6.17□□□□□ -1.42
SCAMP4-207ENST00000472442 FLGP20930 4061 aaPredicted RBP6.13□□□□□ -1.43
SCAMP4-207ENST00000472442 UBR4Q5T4S7 5183 aa6.1□□□□□ -1.43
SCAMP4-207ENST00000472442 LORP23490 312 aaPredicted RBP6.08□□□□□ -1.44
SCAMP4-207ENST00000472442 FAT4Q6V0I7 4981 aa6.08□□□□□ -1.44
SCAMP4-207ENST00000472442 RNF213Q63HN8 5207 aa6.05□□□□□ -1.44
SCAMP4-207ENST00000472442 LCE2CQ5TA81 110 aa6.04□□□□□ -1.44
SCAMP4-207ENST00000472442 LUZP6Q538Z0 58 aa6.01□□□□□ -1.45
SCAMP4-207ENST00000472442 A0A0A0MQY5 61 aa5.97□□□□□ -1.45
SCAMP4-207ENST00000472442 PP632Q6XCG6 107 aa5.93□□□□□ -1.46
SCAMP4-207ENST00000472442 CAMK2N1Q7Z7J9 78 aa5.92□□□□□ -1.46
SCAMP4-207ENST00000472442 MT1HP80294 61 aa5.88□□□□□ -1.47
SCAMP4-207ENST00000472442 M0R2T5 61 aa5.8□□□□□ -1.48
SCAMP4-207ENST00000472442 KRTAP9-8Q9BYQ0 159 aa5.71□□□□□ -1.49
SCAMP4-207ENST00000472442 MT2AP02795 61 aa5.7□□□□□ -1.5
SCAMP4-207ENST00000472442 TNP1P09430 55 aa5.7□□□□□ -1.5
SCAMP4-207ENST00000472442 MT1FP04733 61 aa5.7□□□□□ -1.5
SCAMP4-207ENST00000472442 KRTAP19-1Q8IUB9 90 aa5.69□□□□□ -1.5
SCAMP4-207ENST00000472442 SPRR2GQ9BYE4 73 aa5.69□□□□□ -1.5
SCAMP4-207ENST00000472442 SPRR5A0A1B0GTR4 108 aa5.66□□□□□ -1.5
SCAMP4-207ENST00000472442 KRTAP10-10P60014 251 aa5.64□□□□□ -1.51
SCAMP4-207ENST00000472442 KRTAP23-1A1A580 65 aa5.61□□□□□ -1.51
SCAMP4-207ENST00000472442 KRTAP19-8Q3LI54 63 aa5.49□□□□□ -1.53
SCAMP4-207ENST00000472442 KRTAP9-3Q9BYQ3 159 aa5.49□□□□□ -1.53
SCAMP4-207ENST00000472442 LCE2AQ5TA79 106 aaPredicted RBP5.47□□□□□ -1.53
SCAMP4-207ENST00000472442 MT1BP07438 61 aa5.44□□□□□ -1.54
SCAMP4-207ENST00000472442 LCE3AQ5TA76 89 aa5.4□□□□□ -1.54
SCAMP4-207ENST00000472442 KRTAP10-5P60370 271 aa5.32□□□□□ -1.56
SCAMP4-207ENST00000472442 MT1XP80297 61 aa5.32□□□□□ -1.56
SCAMP4-207ENST00000472442 LCE2BO14633 110 aa5.32□□□□□ -1.56
SCAMP4-207ENST00000472442 PRO2289Q9P1D8 64 aa5.32□□□□□ -1.56
SCAMP4-207ENST00000472442 USH2AO75445 5202 aa5.27□□□□□ -1.57
SCAMP4-207ENST00000472442 LCE2DQ5TA82 110 aaPredicted RBP5.26□□□□□ -1.57
SCAMP4-207ENST00000472442 KRTAP8-1Q8IUC2 63 aa5.22□□□□□ -1.57
SCAMP4-207ENST00000472442 INE1O15225 51 aa5.21□□□□□ -1.58
SCAMP4-207ENST00000472442 KRTAP10-7P60409 375 aaPredicted RBP5.15□□□□□ -1.59
SCAMP4-207ENST00000472442 KRTAP12-3P60328 96 aa5.11□□□□□ -1.59
SCAMP4-207ENST00000472442 KRTAP10-12P60413 245 aa5.08□□□□□ -1.6
SCAMP4-207ENST00000472442 KMT2DO14686 5537 aa5□□□□□ -1.61
SCAMP4-207ENST00000472442 SSPOA2VEC9 5147 aa5□□□□□ -1.61
SCAMP4-207ENST00000472442 FSIP2Q5CZC0 6907 aa4.96□□□□□ -1.62
SCAMP4-207ENST00000472442 KRTAP4-8A0A0G2JLE6 195 aa4.91□□□□□ -1.62
SCAMP4-207ENST00000472442 KRTAP4-8Q9BYQ9 185 aa4.91□□□□□ -1.62
SCAMP4-207ENST00000472442 KRTAP19-6Q3LI70 58 aa4.87□□□□□ -1.63
SCAMP4-207ENST00000472442 KRTAP19-5Q3LI72 72 aa4.86□□□□□ -1.63
SCAMP4-207ENST00000472442 LCE3CQ5T5A8 94 aa4.81□□□□□ -1.64
SCAMP4-207ENST00000472442 KRTAP19-7Q3SYF9 63 aa4.76□□□□□ -1.65
SCAMP4-207ENST00000472442 KRTAP9-6A8MVA2 160 aa4.71□□□□□ -1.65
SCAMP4-207ENST00000472442 FCGBPQ9Y6R7 5405 aaPredicted RBP4.71□□□□□ -1.66
SCAMP4-207ENST00000472442 MT1EP04732 61 aa4.63□□□□□ -1.67
SCAMP4-207ENST00000472442 KRTAP2-3P0C7H8 128 aa4.6□□□□□ -1.67
SCAMP4-207ENST00000472442 KRTAP2-4Q9BYR9 128 aa4.6□□□□□ -1.67
SCAMP4-207ENST00000472442 KRTAP2-1Q9BYU5 128 aa4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms