RNA–Protein interactions for RNA: ENST00000471842.1

LTA-215, Transcript of lymphotoxin alpha, humanhuman

TSL 2

Gene LTA, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-215ENST00000471842 CRCT1Q9UGL9 99 aa6.81□□□□□ -1.32
LTA-215ENST00000471842 FSIP2Q5CZC0 6907 aa6.81□□□□□ -1.32
LTA-215ENST00000471842 A8MUU9 505 aa6.8□□□□□ -1.32
LTA-215ENST00000471842 A8MU10 97 aa6.79□□□□□ -1.32
LTA-215ENST00000471842 H3BPC8 53 aa6.79□□□□□ -1.32
LTA-215ENST00000471842 LINC00313P59037 77 aa6.79□□□□□ -1.32
LTA-215ENST00000471842 LINC00208Q96KT6 92 aa6.79□□□□□ -1.32
LTA-215ENST00000471842 CASC2Q6XLA1 102 aa6.79□□□□□ -1.32
LTA-215ENST00000471842 IGHV6-1A0A0B4J1U7 121 aa6.77□□□□□ -1.33
LTA-215ENST00000471842 FLGP20930 4061 aaPredicted RBP6.73□□□□□ -1.33
LTA-215ENST00000471842 NOTCH2NLQ7Z3S9 236 aa6.73□□□□□ -1.33
LTA-215ENST00000471842 LINC00472Q9H8W2 130 aa6.73□□□□□ -1.33
LTA-215ENST00000471842 LINC01558Q9Y6Z2 57 aa6.73□□□□□ -1.33
LTA-215ENST00000471842 KRTAP16-1A8MUX0 517 aa6.72□□□□□ -1.33
LTA-215ENST00000471842 A0A1B0GVX0 72 aa6.67□□□□□ -1.34
LTA-215ENST00000471842 Q8N9L7 120 aa6.66□□□□□ -1.34
LTA-215ENST00000471842 HRES1P13985 223 aa6.6□□□□□ -1.35
LTA-215ENST00000471842 COA5Q86WW8 74 aa6.6□□□□□ -1.35
LTA-215ENST00000471842 KRTAP9-8Q9BYQ0 159 aa6.57□□□□□ -1.36
LTA-215ENST00000471842 PRAC1Q96KF2 57 aa6.56□□□□□ -1.36
LTA-215ENST00000471842 C8orf17Q9NRJ1 99 aa6.55□□□□□ -1.36
LTA-215ENST00000471842 A8MWP4 228 aa6.54□□□□□ -1.36
LTA-215ENST00000471842 SPINK7P58062 85 aa6.53□□□□□ -1.36
LTA-215ENST00000471842 H0Y9P7 68 aa6.53□□□□□ -1.36
LTA-215ENST00000471842 MT2AP02795 61 aa6.52□□□□□ -1.37
LTA-215ENST00000471842 WFDC13Q8IUB5 93 aa6.49□□□□□ -1.37
LTA-215ENST00000471842 KRTAP3-3Q9BYR6 98 aa6.49□□□□□ -1.37
LTA-215ENST00000471842 KRTAP3-2Q9BYR7 98 aa6.49□□□□□ -1.37
LTA-215ENST00000471842 K7EQZ3 153 aa6.47□□□□□ -1.37
LTA-215ENST00000471842 KRTAP10-10P60014 251 aa6.47□□□□□ -1.37
LTA-215ENST00000471842 MT1FP04733 61 aa6.47□□□□□ -1.37
LTA-215ENST00000471842 MMP24-AS1A0A0U1RRL7 71 aa6.43□□□□□ -1.38
LTA-215ENST00000471842 ADM2Q7Z4H4 148 aa6.43□□□□□ -1.38
LTA-215ENST00000471842 MRPL34Q9BQ48 92 aaKnown RBP6.43□□□□□ -1.38
LTA-215ENST00000471842 SPATA8Q6RVD6 105 aa6.42□□□□□ -1.38
LTA-215ENST00000471842 USH2AO75445 5202 aa6.41□□□□□ -1.38
LTA-215ENST00000471842 A0A0A0MQY5 61 aa6.41□□□□□ -1.38
LTA-215ENST00000471842 SSPOA2VEC9 5147 aa6.38□□□□□ -1.39
LTA-215ENST00000471842 CSAG1Q6PB30 78 aa6.38□□□□□ -1.39
LTA-215ENST00000471842 IGKV2D-30A0A075B6S6 120 aa6.37□□□□□ -1.39
LTA-215ENST00000471842 LCE2BO14633 110 aa6.37□□□□□ -1.39
LTA-215ENST00000471842 IGKV2-30P06310 120 aa6.37□□□□□ -1.39
LTA-215ENST00000471842 ROMO1P60602 79 aa6.37□□□□□ -1.39
LTA-215ENST00000471842 KRTAP9-3Q9BYQ3 159 aa6.36□□□□□ -1.39
LTA-215ENST00000471842 TP53AIP1Q9HCN2 124 aa6.36□□□□□ -1.39
LTA-215ENST00000471842 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.34□□□□□ -1.4
LTA-215ENST00000471842 KRTAP19-1Q8IUB9 90 aa6.31□□□□□ -1.4
LTA-215ENST00000471842 H1FX-AS1Q4G0G2 97 aa6.3□□□□□ -1.4
LTA-215ENST00000471842 Q5W150 140 aa6.29□□□□□ -1.4
LTA-215ENST00000471842 KRTAP9-7A8MTY7 169 aa6.28□□□□□ -1.4
LTA-215ENST00000471842 UQCR11O14957 56 aa6.28□□□□□ -1.4
LTA-215ENST00000471842 MIR22HGQ0VDD5 57 aa6.28□□□□□ -1.4
LTA-215ENST00000471842 A0A1B0GU69 56 aa6.24□□□□□ -1.41
LTA-215ENST00000471842 KRTAP25-1Q3LHN0 102 aa6.24□□□□□ -1.41
LTA-215ENST00000471842 ACYP2P14621 99 aa6.23□□□□□ -1.41
LTA-215ENST00000471842 FCGBPQ9Y6R7 5405 aaPredicted RBP6.21□□□□□ -1.42
LTA-215ENST00000471842 KRTAP19-6Q3LI70 58 aa6.13□□□□□ -1.43
LTA-215ENST00000471842 MACF1Q9UPN3 7388 aaKnown RBP6.12□□□□□ -1.43
LTA-215ENST00000471842 S4R3F8 94 aa6.11□□□□□ -1.43
LTA-215ENST00000471842 DMAC1Q96GE9 116 aa6.1□□□□□ -1.43
LTA-215ENST00000471842 P0C880 135 aa6.08□□□□□ -1.44
LTA-215ENST00000471842 KRTAP3-1Q9BYR8 98 aa6.06□□□□□ -1.44
LTA-215ENST00000471842 SYNE2Q8WXH0 6885 aaKnown RBP6.04□□□□□ -1.44
LTA-215ENST00000471842 K7ERS5 55 aa5.96□□□□□ -1.46
LTA-215ENST00000471842 MT1BP07438 61 aa5.9□□□□□ -1.47
LTA-215ENST00000471842 SPRR2GQ9BYE4 73 aa5.88□□□□□ -1.47
LTA-215ENST00000471842 NDUFAF8A1L188 74 aa5.87□□□□□ -1.47
LTA-215ENST00000471842 KRTAP6-3Q3LI67 103 aa5.87□□□□□ -1.47
LTA-215ENST00000471842 SPINT4Q6UDR6 99 aa5.87□□□□□ -1.47
LTA-215ENST00000471842 LUZP6Q538Z0 58 aa5.85□□□□□ -1.47
LTA-215ENST00000471842 KRTAP19-8Q3LI54 63 aa5.84□□□□□ -1.47
LTA-215ENST00000471842 KRTAP15-1Q3LI76 137 aa5.83□□□□□ -1.48
LTA-215ENST00000471842 CRIPTQ9P021 101 aa5.78□□□□□ -1.48
LTA-215ENST00000471842 KRTAP10-5P60370 271 aa5.77□□□□□ -1.49
LTA-215ENST00000471842 H0YAA0 97 aa5.76□□□□□ -1.49
LTA-215ENST00000471842 A0A1B0GU33 70 aa5.71□□□□□ -1.5
LTA-215ENST00000471842 NEBP20929 6669 aa5.65□□□□□ -1.51
LTA-215ENST00000471842 LOC100996750A0A140TA64 210 aa5.64□□□□□ -1.51
LTA-215ENST00000471842 KRTAP4-6Q9BYQ5 205 aa5.64□□□□□ -1.51
LTA-215ENST00000471842 PLAC4Q8WY50 150 aa5.6□□□□□ -1.51
LTA-215ENST00000471842 R4GN34 69 aa5.6□□□□□ -1.51
LTA-215ENST00000471842 MUC12Q9UKN1 5478 aa5.58□□□□□ -1.52
LTA-215ENST00000471842 M0QZ58 72 aa5.58□□□□□ -1.52
LTA-215ENST00000471842 PRO2289Q9P1D8 64 aa5.58□□□□□ -1.52
LTA-215ENST00000471842 KRTAP5-9P26371 169 aa5.55□□□□□ -1.52
LTA-215ENST00000471842 KRTAP20-1Q3LI63 56 aa5.53□□□□□ -1.52
LTA-215ENST00000471842 CAMK2N1Q7Z7J9 78 aa5.53□□□□□ -1.52
LTA-215ENST00000471842 MT1XP80297 61 aa5.51□□□□□ -1.53
LTA-215ENST00000471842 SPRR2FQ96RM1 72 aa5.48□□□□□ -1.53
LTA-215ENST00000471842 KMT2DO14686 5537 aa5.47□□□□□ -1.53
LTA-215ENST00000471842 KRTAP8-1Q8IUC2 63 aa5.44□□□□□ -1.54
LTA-215ENST00000471842 SPRR2EP22531 72 aa5.42□□□□□ -1.54
LTA-215ENST00000471842 SPRR2BP35325 72 aa5.42□□□□□ -1.54
LTA-215ENST00000471842 SPRR2AP35326 72 aa5.42□□□□□ -1.54
LTA-215ENST00000471842 MDN1Q9NU22 5596 aa5.42□□□□□ -1.54
LTA-215ENST00000471842 KRTAP12-2P59991 146 aa5.36□□□□□ -1.55
LTA-215ENST00000471842 C10orf95Q9H7T3 257 aa5.33□□□□□ -1.56
LTA-215ENST00000471842 KRTAP4-8A0A0G2JLE6 195 aa5.32□□□□□ -1.56
LTA-215ENST00000471842 KRTAP2-3P0C7H8 128 aa5.32□□□□□ -1.56
LTA-215ENST00000471842 KRTAP4-8Q9BYQ9 185 aa5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms