RNA–Protein interactions for RNA: ENST00000471752.1

USP48-207, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-207ENST00000471752 KRTAP19-8Q3LI54 63 aa3.61□□□□□ -1.83
USP48-207ENST00000471752 SPCS1Q9Y6A9 102 aa3.6□□□□□ -1.83
USP48-207ENST00000471752 FAM236AA0A1B0GUQ0 79 aa3.59□□□□□ -1.83
USP48-207ENST00000471752 FAM236BA0A1B0GV22 79 aa3.59□□□□□ -1.83
USP48-207ENST00000471752 A6NN06 94 aa3.59□□□□□ -1.83
USP48-207ENST00000471752 CXCL6P80162 114 aa3.59□□□□□ -1.83
USP48-207ENST00000471752 C1orf64Q8NEQ6 169 aa3.59□□□□□ -1.83
USP48-207ENST00000471752 SPRR2GQ9BYE4 73 aa3.59□□□□□ -1.83
USP48-207ENST00000471752 S4R3F8 94 aa3.58□□□□□ -1.84
USP48-207ENST00000471752 KRTAP10-5P60370 271 aa3.56□□□□□ -1.84
USP48-207ENST00000471752 Q5VV11 94 aa3.56□□□□□ -1.84
USP48-207ENST00000471752 CSAG1Q6PB30 78 aa3.56□□□□□ -1.84
USP48-207ENST00000471752 K7EP34 96 aa3.53□□□□□ -1.84
USP48-207ENST00000471752 UBL5Q9BZL1 73 aa3.53□□□□□ -1.84
USP48-207ENST00000471752 KLKP1Q107X0 134 aa3.52□□□□□ -1.85
USP48-207ENST00000471752 CYP4F30PQ9H0H9 118 aa3.52□□□□□ -1.85
USP48-207ENST00000471752 KRTAP5-9P26371 169 aa3.49□□□□□ -1.85
USP48-207ENST00000471752 ETDBQ3ZM63 59 aa3.49□□□□□ -1.85
USP48-207ENST00000471752 COL5A1-AS1Q5SY13 56 aa3.49□□□□□ -1.85
USP48-207ENST00000471752 KRTAP20-1Q3LI63 56 aa3.47□□□□□ -1.85
USP48-207ENST00000471752 TP53AIP1Q9HCN2 124 aa3.47□□□□□ -1.85
USP48-207ENST00000471752 PCP4L1A6NKN8 68 aa3.42□□□□□ -1.86
USP48-207ENST00000471752 MT1XP80297 61 aa3.42□□□□□ -1.86
USP48-207ENST00000471752 TRAV22A0A0B4J277 110 aa3.41□□□□□ -1.86
USP48-207ENST00000471752 F8W1H4 67 aa3.41□□□□□ -1.86
USP48-207ENST00000471752 IMUPQ9GZP8 106 aa3.41□□□□□ -1.86
USP48-207ENST00000471752 ADM2Q7Z4H4 148 aa3.4□□□□□ -1.87
USP48-207ENST00000471752 LOC101927531A0A1B0GV80 90 aa3.39□□□□□ -1.87
USP48-207ENST00000471752 GTF2H5Q6ZYL4 71 aa3.39□□□□□ -1.87
USP48-207ENST00000471752 CRIPTQ9P021 101 aa3.39□□□□□ -1.87
USP48-207ENST00000471752 H0Y9P7 68 aa3.38□□□□□ -1.87
USP48-207ENST00000471752 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.38□□□□□ -1.87
USP48-207ENST00000471752 SPRR2FQ96RM1 72 aa3.38□□□□□ -1.87
USP48-207ENST00000471752 P0C880 135 aa3.37□□□□□ -1.87
USP48-207ENST00000471752 H0YAA0 97 aa3.36□□□□□ -1.87
USP48-207ENST00000471752 NDUFC1O43677 76 aa3.36□□□□□ -1.87
USP48-207ENST00000471752 HIST1H4AP62805 103 aaKnown RBP3.36□□□□□ -1.87
USP48-207ENST00000471752 UQCRQO14949 82 aa3.35□□□□□ -1.87
USP48-207ENST00000471752 KRTAP2-3P0C7H8 128 aa3.35□□□□□ -1.87
USP48-207ENST00000471752 KRTAP2-4Q9BYR9 128 aa3.35□□□□□ -1.87
USP48-207ENST00000471752 SPRR2EP22531 72 aa3.34□□□□□ -1.87
USP48-207ENST00000471752 SPRR2BP35325 72 aa3.34□□□□□ -1.87
USP48-207ENST00000471752 SPRR2AP35326 72 aa3.34□□□□□ -1.87
USP48-207ENST00000471752 LINC00208Q96KT6 92 aa3.34□□□□□ -1.87
USP48-207ENST00000471752 A8MUN3 132 aa3.33□□□□□ -1.88
USP48-207ENST00000471752 LCE1AQ5T7P2 110 aa3.32□□□□□ -1.88
USP48-207ENST00000471752 ACYP1P07311 99 aa3.31□□□□□ -1.88
USP48-207ENST00000471752 KRTAP8-1Q8IUC2 63 aa3.31□□□□□ -1.88
USP48-207ENST00000471752 OCR1Q9BZK8 76 aa3.3□□□□□ -1.88
USP48-207ENST00000471752 FAM240AA0A1B0GVK7 77 aa3.29□□□□□ -1.88
USP48-207ENST00000471752 ATOX1O00244 68 aa3.29□□□□□ -1.88
USP48-207ENST00000471752 KRTAP10-7P60409 375 aaPredicted RBP3.29□□□□□ -1.88
USP48-207ENST00000471752 PLAC4Q8WY50 150 aa3.29□□□□□ -1.88
USP48-207ENST00000471752 M0QZ58 72 aa3.27□□□□□ -1.89
USP48-207ENST00000471752 KRTAP12-2P59991 146 aa3.27□□□□□ -1.89
USP48-207ENST00000471752 ATP5EP2Q5VTU8 51 aa3.27□□□□□ -1.89
USP48-207ENST00000471752 LINC01554Q52M75 96 aa3.26□□□□□ -1.89
USP48-207ENST00000471752 LINC00643Q86TS7 51 aa3.26□□□□□ -1.89
USP48-207ENST00000471752 PRO2289Q9P1D8 64 aa3.26□□□□□ -1.89
USP48-207ENST00000471752 R4GN34 69 aa3.25□□□□□ -1.89
USP48-207ENST00000471752 A0A1B0GV90 55 aa3.23□□□□□ -1.89
USP48-207ENST00000471752 SPRR2DP22532 72 aa3.23□□□□□ -1.89
USP48-207ENST00000471752 KRTAP2-2Q9BYT5 123 aa3.23□□□□□ -1.89
USP48-207ENST00000471752 KRTAP2-1Q9BYU5 128 aa3.23□□□□□ -1.89
USP48-207ENST00000471752 MP68P56378 58 aa3.22□□□□□ -1.89
USP48-207ENST00000471752 KRTAP10-12P60413 245 aa3.21□□□□□ -1.9
USP48-207ENST00000471752 DMAC1Q96GE9 116 aa3.21□□□□□ -1.9
USP48-207ENST00000471752 C20orf197Q8N268 126 aa3.14□□□□□ -1.91
USP48-207ENST00000471752 H3BPC8 53 aa3.13□□□□□ -1.91
USP48-207ENST00000471752 KRTAP13-4Q3LI77 160 aa3.13□□□□□ -1.91
USP48-207ENST00000471752 GPR98Q8WXG9 6306 aa3.13□□□□□ -1.91
USP48-207ENST00000471752 SCGB1A1P11684 91 aa3.12□□□□□ -1.91
USP48-207ENST00000471752 MT-ATP8P03928 68 aa3.1□□□□□ -1.91
USP48-207ENST00000471752 KRTAP5-11Q6L8G4 156 aa3.1□□□□□ -1.91
USP48-207ENST00000471752 TRAV7A0A075B6U4 112 aa3.09□□□□□ -1.91
USP48-207ENST00000471752 DSTQ03001 7570 aaKnown RBP3.09□□□□□ -1.92
USP48-207ENST00000471752 ACYP2P14621 99 aa3.08□□□□□ -1.92
USP48-207ENST00000471752 KRTAP19-7Q3SYF9 63 aa3.07□□□□□ -1.92
USP48-207ENST00000471752 SNURFQ9Y675 71 aa3.07□□□□□ -1.92
USP48-207ENST00000471752 LCE1EQ5T753 118 aa3.04□□□□□ -1.92
USP48-207ENST00000471752 MT1EP04732 61 aa3.02□□□□□ -1.93
USP48-207ENST00000471752 CHKB-CPT1BH3BT56 60 aa3.01□□□□□ -1.93
USP48-207ENST00000471752 J3QR89 54 aa3.01□□□□□ -1.93
USP48-207ENST00000471752 HMCN1Q96RW7 5635 aa2.99□□□□□ -1.93
USP48-207ENST00000471752 SPTSSBQ8NFR3 76 aa2.99□□□□□ -1.93
USP48-207ENST00000471752 KRTAP19-3Q7Z4W3 81 aa2.98□□□□□ -1.93
USP48-207ENST00000471752 A0A0D9SG42 100 aa2.97□□□□□ -1.93
USP48-207ENST00000471752 KRTAP19-5Q3LI72 72 aa2.97□□□□□ -1.93
USP48-207ENST00000471752 CAMK2N1Q7Z7J9 78 aa2.97□□□□□ -1.93
USP48-207ENST00000471752 SPATA8Q6RVD6 105 aa2.96□□□□□ -1.94
USP48-207ENST00000471752 SMIM20Q8N5G0 67 aa2.94□□□□□ -1.94
USP48-207ENST00000471752 AHNAK2Q8IVF2 5795 aa2.93□□□□□ -1.94
USP48-207ENST00000471752 KRTAP4-3Q9BYR4 195 aa2.93□□□□□ -1.94
USP48-207ENST00000471752 MT3P25713 68 aa2.92□□□□□ -1.94
USP48-207ENST00000471752 COA5Q86WW8 74 aa2.92□□□□□ -1.94
USP48-207ENST00000471752 SPANXA2-OT1Q8N9U9 137 aa2.92□□□□□ -1.94
USP48-207ENST00000471752 KRTAP12-1P59990 96 aa2.9□□□□□ -1.95
USP48-207ENST00000471752 SPINT4Q6UDR6 99 aa2.9□□□□□ -1.95
USP48-207ENST00000471752 CYSTM1Q9H1C7 97 aa2.9□□□□□ -1.95
USP48-207ENST00000471752 K7ERU9 68 aa2.89□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms