RNA–Protein interactions for RNA: ENST00000471166.1

TNPO3-202, Transcript of transportin 3, humanhuman

TSL 5 BASIC

Gene TNPO3, Length 3,019 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO3-202ENST00000471166 KRTAP13-2Q52LG2 175 aa4.72□□□□□ -1.65
TNPO3-202ENST00000471166 FAT3Q8TDW7 4589 aa4.71□□□□□ -1.66
TNPO3-202ENST00000471166 DMBT1Q9UGM3 2413 aaPredicted RBP4.7□□□□□ -1.66
TNPO3-202ENST00000471166 LINC00483Q53H64 154 aa4.7□□□□□ -1.66
TNPO3-202ENST00000471166 H0YAA0 97 aa4.69□□□□□ -1.66
TNPO3-202ENST00000471166 SSBP3-AS1Q7Z2R9 100 aa4.69□□□□□ -1.66
TNPO3-202ENST00000471166 TNXBP22105 4242 aa4.67□□□□□ -1.66
TNPO3-202ENST00000471166 TYMSOSQ8TAI1 123 aa4.66□□□□□ -1.66
TNPO3-202ENST00000471166 PCLOQ9Y6V0 5065 aa4.65□□□□□ -1.67
TNPO3-202ENST00000471166 KRTAP3-3Q9BYR6 98 aa4.64□□□□□ -1.67
TNPO3-202ENST00000471166 KRTAP3-2Q9BYR7 98 aa4.64□□□□□ -1.67
TNPO3-202ENST00000471166 NDUFAF8A1L188 74 aa4.63□□□□□ -1.67
TNPO3-202ENST00000471166 SPINT4Q6UDR6 99 aa4.62□□□□□ -1.67
TNPO3-202ENST00000471166 KRTAP16-1A8MUX0 517 aa4.62□□□□□ -1.67
TNPO3-202ENST00000471166 MT1HL1P0DM35 61 aa4.59□□□□□ -1.67
TNPO3-202ENST00000471166 LCE2DQ5TA82 110 aaPredicted RBP4.59□□□□□ -1.67
TNPO3-202ENST00000471166 A0A0A0MQY5 61 aa4.59□□□□□ -1.68
TNPO3-202ENST00000471166 KRTAP10-8P60410 259 aa4.58□□□□□ -1.68
TNPO3-202ENST00000471166 A0A1B0GU33 70 aa4.57□□□□□ -1.68
TNPO3-202ENST00000471166 C10orf95Q9H7T3 257 aa4.54□□□□□ -1.68
TNPO3-202ENST00000471166 HERC1Q15751 4861 aa4.54□□□□□ -1.68
TNPO3-202ENST00000471166 C20orf166-AS1Q96NR2 134 aa4.53□□□□□ -1.68
TNPO3-202ENST00000471166 TPRXLQ17RH7 258 aa4.51□□□□□ -1.69
TNPO3-202ENST00000471166 H1FX-AS1Q4G0G2 97 aa4.51□□□□□ -1.69
TNPO3-202ENST00000471166 K7ERS5 55 aa4.48□□□□□ -1.69
TNPO3-202ENST00000471166 LPAP08519 4548 aa4.48□□□□□ -1.69
TNPO3-202ENST00000471166 A0A0D9SG42 100 aa4.47□□□□□ -1.69
TNPO3-202ENST00000471166 C9orf92A6NGG3 77 aa4.46□□□□□ -1.7
TNPO3-202ENST00000471166 KRTAP15-1Q3LI76 137 aa4.44□□□□□ -1.7
TNPO3-202ENST00000471166 COX6B2Q6YFQ2 88 aa4.44□□□□□ -1.7
TNPO3-202ENST00000471166 RPS29P62273 56 aaKnown RBP4.43□□□□□ -1.7
TNPO3-202ENST00000471166 LRP2P98164 4655 aa4.43□□□□□ -1.7
TNPO3-202ENST00000471166 KRTAP3-1Q9BYR8 98 aa4.41□□□□□ -1.7
TNPO3-202ENST00000471166 HMCN2Q8NDA2 5059 aa4.37□□□□□ -1.71
TNPO3-202ENST00000471166 KRTAP13-4Q3LI77 160 aa4.36□□□□□ -1.71
TNPO3-202ENST00000471166 RPL37P61927 97 aaKnown RBP4.35□□□□□ -1.71
TNPO3-202ENST00000471166 XP32Q5T750 250 aa4.32□□□□□ -1.72
TNPO3-202ENST00000471166 LUZP6Q538Z0 58 aa4.31□□□□□ -1.72
TNPO3-202ENST00000471166 UBR4Q5T4S7 5183 aa4.27□□□□□ -1.73
TNPO3-202ENST00000471166 MUC2Q02817 5179 aa4.26□□□□□ -1.73
TNPO3-202ENST00000471166 KRTAP10-6P60371 365 aaPredicted RBP4.26□□□□□ -1.73
TNPO3-202ENST00000471166 KRTAP12-2P59991 146 aa4.24□□□□□ -1.73
TNPO3-202ENST00000471166 S4R3F8 94 aa4.23□□□□□ -1.73
TNPO3-202ENST00000471166 RNF213Q63HN8 5207 aa4.23□□□□□ -1.73
TNPO3-202ENST00000471166 KRTAP4-1Q9BYQ7 146 aa4.19□□□□□ -1.74
TNPO3-202ENST00000471166 MUC17Q685J3 4493 aa4.16□□□□□ -1.74
TNPO3-202ENST00000471166 SEC61BP60468 96 aaKnown RBP4.14□□□□□ -1.75
TNPO3-202ENST00000471166 KRTAP12-1P59990 96 aa4.13□□□□□ -1.75
TNPO3-202ENST00000471166 FAT4Q6V0I7 4981 aa4.09□□□□□ -1.75
TNPO3-202ENST00000471166 PLAC4Q8WY50 150 aa4.08□□□□□ -1.76
TNPO3-202ENST00000471166 KRTAP19-2Q3LHN2 52 aa3.99□□□□□ -1.77
TNPO3-202ENST00000471166 LCE2BO14633 110 aa3.99□□□□□ -1.77
TNPO3-202ENST00000471166 LCE2CQ5TA81 110 aa3.96□□□□□ -1.78
TNPO3-202ENST00000471166 FLGP20930 4061 aaPredicted RBP3.96□□□□□ -1.78
TNPO3-202ENST00000471166 LCE2AQ5TA79 106 aaPredicted RBP3.93□□□□□ -1.78
TNPO3-202ENST00000471166 M0QZ58 72 aa3.91□□□□□ -1.78
TNPO3-202ENST00000471166 MT1HP80294 61 aa3.88□□□□□ -1.79
TNPO3-202ENST00000471166 M0R2T5 61 aa3.87□□□□□ -1.79
TNPO3-202ENST00000471166 R4GN34 69 aa3.84□□□□□ -1.79
TNPO3-202ENST00000471166 LORP23490 312 aaPredicted RBP3.8□□□□□ -1.8
TNPO3-202ENST00000471166 CAMK2N1Q7Z7J9 78 aa3.73□□□□□ -1.81
TNPO3-202ENST00000471166 KRTAP9-8Q9BYQ0 159 aa3.72□□□□□ -1.81
TNPO3-202ENST00000471166 MT2AP02795 61 aa3.71□□□□□ -1.82
TNPO3-202ENST00000471166 MT1FP04733 61 aa3.7□□□□□ -1.82
TNPO3-202ENST00000471166 KRTAP10-10P60014 251 aa3.69□□□□□ -1.82
TNPO3-202ENST00000471166 PP632Q6XCG6 107 aa3.68□□□□□ -1.82
TNPO3-202ENST00000471166 PRO2289Q9P1D8 64 aa3.65□□□□□ -1.82
TNPO3-202ENST00000471166 KRTAP23-1A1A580 65 aa3.62□□□□□ -1.83
TNPO3-202ENST00000471166 FSIP2Q5CZC0 6907 aa3.62□□□□□ -1.83
TNPO3-202ENST00000471166 SPRR5A0A1B0GTR4 108 aa3.6□□□□□ -1.83
TNPO3-202ENST00000471166 USH2AO75445 5202 aa3.59□□□□□ -1.83
TNPO3-202ENST00000471166 KRTAP9-3Q9BYQ3 159 aa3.58□□□□□ -1.84
TNPO3-202ENST00000471166 KRTAP19-1Q8IUB9 90 aa3.57□□□□□ -1.84
TNPO3-202ENST00000471166 TNP1P09430 55 aa3.54□□□□□ -1.84
TNPO3-202ENST00000471166 SPRR2GQ9BYE4 73 aa3.52□□□□□ -1.85
TNPO3-202ENST00000471166 INE1O15225 51 aa3.46□□□□□ -1.85
TNPO3-202ENST00000471166 MT1BP07438 61 aa3.46□□□□□ -1.86
TNPO3-202ENST00000471166 SSPOA2VEC9 5147 aa3.46□□□□□ -1.86
TNPO3-202ENST00000471166 KRTAP9-2Q9BYQ4 174 aa3.44□□□□□ -1.86
TNPO3-202ENST00000471166 KRTAP19-8Q3LI54 63 aa3.43□□□□□ -1.86
TNPO3-202ENST00000471166 LCE3AQ5TA76 89 aa3.39□□□□□ -1.87
TNPO3-202ENST00000471166 MT1XP80297 61 aa3.33□□□□□ -1.88
TNPO3-202ENST00000471166 FCGBPQ9Y6R7 5405 aaPredicted RBP3.32□□□□□ -1.88
TNPO3-202ENST00000471166 KRTAP10-5P60370 271 aa3.31□□□□□ -1.88
TNPO3-202ENST00000471166 KMT2DO14686 5537 aa3.29□□□□□ -1.88
TNPO3-202ENST00000471166 CRCT1Q9UGL9 99 aa3.27□□□□□ -1.89
TNPO3-202ENST00000471166 KRTAP19-6Q3LI70 58 aa3.27□□□□□ -1.89
TNPO3-202ENST00000471166 KRTAP10-7P60409 375 aaPredicted RBP3.23□□□□□ -1.89
TNPO3-202ENST00000471166 MACF1Q9UPN3 7388 aaKnown RBP3.22□□□□□ -1.89
TNPO3-202ENST00000471166 KRTAP9-6A0A140TA67 174 aa3.19□□□□□ -1.9
TNPO3-202ENST00000471166 KRTAP10-12P60413 245 aa3.17□□□□□ -1.9
TNPO3-202ENST00000471166 SYNE2Q8WXH0 6885 aaKnown RBP3.17□□□□□ -1.9
TNPO3-202ENST00000471166 KRTAP4-8A0A0G2JLE6 195 aa3.17□□□□□ -1.9
TNPO3-202ENST00000471166 KRTAP4-8Q9BYQ9 185 aa3.17□□□□□ -1.9
TNPO3-202ENST00000471166 KRTAP12-3P60328 96 aa3.16□□□□□ -1.9
TNPO3-202ENST00000471166 KRTAP8-1Q8IUC2 63 aa3.16□□□□□ -1.9
TNPO3-202ENST00000471166 MUC12Q9UKN1 5478 aa3.06□□□□□ -1.92
TNPO3-202ENST00000471166 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.04□□□□□ -1.92
TNPO3-202ENST00000471166 KRTAP19-4Q3LI73 84 aa3.01□□□□□ -1.93
TNPO3-202ENST00000471166 KRTAP9-6A8MVA2 160 aa3.01□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms